Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0468 ATGGTGGATCTCCATGAAAAGTCGCCTCCAAGAACGGGGGAGATAGTAAGAAAGTCCGAAAACAAAACTTCAGATGCAAGCGACAACGCCGTCCTTGGAATCCCAAAAGACACAGCAAATGGGTCTCCTCCCTCCGCCGCCGGTTTCACGACGCCGGTGGCAGGCTCTGCCGCTTCTCCGGAAACCTCAGCTAATAAGCTTTCTTTCCCTACTAAGCCAACTGTTCTGAAAAGGTCAGTCTACTCTAAACCAAAATCAAGATTTGGAGAAAAACCAGTGTGTATTGACTCCAAAACGTTTGAAGAAATGCTCGATCCTACCTCGAGAGAACAAATTGCATCCCCTGCTCCGCCTGCTGATCAAAGTGAGGAGGAAGATGAAGAGGCCGAGATCTTCATGAAAGTAGAGTTGAGCAGAGAGAAACGCCAAAGAGTAGAGTCCAAAACTTTAGTCCAATTGGTTTTAGTTTTTTGCATTATAGGTGGCTTAATTGCTAGCTTAACGATTCAAAAATTCAAAAACTATTTTATTTGGGGTTTACAGAGCTGGAAATGGTGGTTCCTCTTAACGGTAACATTCTGTGGCCTTGTGGTTACAAGTTGGTTCACCCATTTCATAGTTTTCATGATGGAAATGAACTTCCTCTTTAGAAAGAAACTTCTCTATTTTGTTTATGGGTTGAAAAGAAGTGTCCAAGTTATCATTTGGTTAGCTCTTGTTCTTGTTACATGGGTGCTTTTATTCCATCATGGGCATAGTAGATCTCAAAGATCAAAAACTGCTAATGTGATTTTAGAACACATAACATGGACTTTAGTATCATTCTTAATTGGGGCAAATTTATTGTTGTTTAAAACCCTTTTGCTCAAAATCTTAGCATCAAATTTCCATATGAATCAATATTTCGATAGAATTCATGAAACTATCTTTCATCAGTATGTTCTGCATACCCTATCGGGGCAGCCTCTTGTGGAAAAGGCCGAGAGGGCAGGGAAGCTGGTTAGCAGTGGTTACTTGAGTCTCAAAACTAAGAAGAAGAAGAAGAATAAAGGTGGGGAGAAGGAGGTGATTGATATGGGAAAGCTTCATAGGATGAAGAGAGAAAATGTATCGGCTTGGACTATGAAAGTATTAGTCGATGCGGTTATGAATTCGGAGTTGTCTACCATTTCTAATGCTTTGGAAGAAGAATATATTGGAATTGGTGAAGAGCAAAGAGAGAGTGAGATTACTAATGAGATGGAAGCAATTGCAGCTGCTGATAAAATTTTCAAGAATGTTGCTCATCATGCTAACAACTATATTGAGGAAGACGATATATTGAGGTTCATGATTAAGGAAGAAGTGGATCTTGTATTTTCGCTATTTGAAGGAGCCGAAAAACGAAGAATCAACAAAAAGTCTCTTGCCAAATGGGTGGTGAAGGTATACAAGGGTCGGAAAATGCTAGCACATTCTCTAAAAGACACCAACACGGCCGTAAAGCAACTGAACAAGATTGTGACGGGGATTGCTATTACAGCGACGGTGATCATCTGGCTGTTATTAATGGAAGTTGCGACTACGGAAGCACTCATTCTCCTAAGTTCCCCGCTTGTTGTTGCTGCTTCCGTGTTTGGGAACACTTTTCAGACCATTTTTGAAGCCCTTATTTTTGTTTTTGTCGTGCATCCATTTGATGTTGGAGATCGATGTGTCGTCGACGGCGTTCAGATGATGGTTGAAGAGATGAACATATTGACGACAGTGTTCTTGAATCTGAATAAGGAAAAGTTTTCCTACCCAAACTCTGTTTTGGCTACAAAGCCGATTAGTAATCACTATAGAAGCCCTGATATGACGCTGCCATTGGAGAAGATTGGAGCTCTCAAGGAGAACGAAGAGGTATTTGGAGGAAAATTCTCGGGCGGTGGCATCGAAACGAACCATAGTGTGGTGGTGAAGGAGATTGAACAAGTGAAACTGGATAAATATTGCGCTCTATGTCAAAGTTCATTACCCAGTTTGGTTAAGCAATTGCGCAAAGGAATGTAA 2034 41.15 MVDLHEKSPPRTGEIVRKSENKTSDASDNAVLGIPKDTANGSPPSAAGFTTPVAGSAASPETSANKLSFPTKPTVLKRSVYSKPKSRFGEKPVCIDSKTFEEMLDPTSREQIASPAPPADQSEEEDEEAEIFMKVELSREKRQRVESKTLVQLVLVFCIIGGLIASLTIQKFKNYFIWGLQSWKWWFLLTVTFCGLVVTSWFTHFIVFMMEMNFLFRKKLLYFVYGLKRSVQVIIWLALVLVTWVLLFHHGHSRSQRSKTANVILEHITWTLVSFLIGANLLLFKTLLLKILASNFHMNQYFDRIHETIFHQYVLHTLSGQPLVEKAERAGKLVSSGYLSLKTKKKKKNKGGEKEVIDMGKLHRMKRENVSAWTMKVLVDAVMNSELSTISNALEEEYIGIGEEQRESEITNEMEAIAAADKIFKNVAHHANNYIEEDDILRFMIKEEVDLVFSLFEGAEKRRINKKSLAKWVVKVYKGRKMLAHSLKDTNTAVKQLNKIVTGIAITATVIIWLLLMEVATTEALILLSSPLVVAASVFGNTFQTIFEALIFVFVVHPFDVGDRCVVDGVQMMVEEMNILTTVFLNLNKEKFSYPNSVLATKPISNHYRSPDMTLPLEKIGALKENEEVFGGKFSGGGIETNHSVVVKEIEQVKLDKYCALCQSSLPSLVKQLRKGM 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2270743 2273522 + Conep18aG0048100.1 Cone18ag0468 457429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0468 677 MobiDBLite consensus disorder prediction 106 125 - -
Cone18ag0468 677 Pfam Mechanosensitive ion channel, beta-domain 551 607 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
Cone18ag0468 677 MobiDBLite consensus disorder prediction 55 70 - -
Cone18ag0468 677 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 53 614 IPR016688 GO:0005886(PANTHER)|GO:0006820(PANTHER)|GO:0008381(PANTHER)|GO:0050982(PANTHER)
Cone18ag0468 677 MobiDBLite consensus disorder prediction 1 70 - -
Cone18ag0468 677 SUPERFAMILY Sm-like ribonucleoproteins 548 607 IPR010920 -
Cone18ag0468 677 FunFam Predicted mechanosensitive ion channel 558 607 - -
Cone18ag0468 677 Gene3D - 558 607 IPR023408 -
Cone18ag0468 677 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0468 Cone-Chr18:2270743 Cone4ag1693 Cone-Chr4:12597498 4.31E-307 dispersed
Cone11ag1110 Cone-Chr11:8653799 Cone18ag0468 Cone-Chr18:2270743 2.61E-295 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0468 K22048 - mdm:103440894 634.409