Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0469 ATGGAGATAACGTACGCCTCCCCGAGCTCTACGAACTTGGCTGACTCTGGCGGAGGAGGAGCCCCTCCATCTATGCCTTCGACGACCCGACCCGTGAAGATCATTCCGTTGCAGCATCCGAATGCGGCGTCCCCGTCTTCTTCTTCTACTTCTTCCTCCTCTAGTGCTGCCGCTTCGTTTTCGAAGTGGACGGGGAAAATTAAGCGGCTGACATGGATTGAATGGATGGAGATCCTGCTGCCTTGCTCCCGTTGGATGAGAACCTACAAATGGCGGGAATATTTGCAGGTTGATCTCGTGGCTGGGATTACCGTTGGAATTATGCTCGTTCCGCAGTCAATGTCTTATGCAAAGCTAGCTGGGCTTGAACCAATATATGGACTCTATTCTGCGTTTGTGCCCTTATTTGTGTACGCGATATTTGAGCTTGCAATATTGCTGGCACTTATGGTTGGAGTGTGTGAATGCTTAATGGGTCTATTGAGGCTTGGATGGCTTATTCGTTTTATCAGTCATTCTGTGATTTCTGGCTTTACATCAGCTTCAGCCATTGTTATTGCATCATCTCAAATTAAGTACTTTCTTGGATACTCTGTTGTAAGAAGTAGCAAAATTGTGCCACTGATTGAGAGCATAATAGCTGGAGCAGATGGGTTTCTATGGCAACCCTTCTTGATGGGATCAATCCTCCTTGCAATACTTCTGACTATGAAACACTTGGGAAAAACGAGGAAGTACTTGAGGTTTATGAGAGCAGCAGGGCCCCTCACAGCAGTTGTTTTGGGAACAGTTTTTGTGGAGATATTCAATCCATCTTCCATTTCTTTGGTGGGAGATATTCCTCAGGGCCTTCCATCGTTCTCTATTCCTAAGGGTCTCGATTATGTGGTGACTTTGATTCCAACAGCCCTTCTTATTACTGGTGTAGCTATACTGGAATCGGTCGGGATAGCCAAAGCATTAGCAGCAAAGAACGGGTATGAGTTGGATTCAAATCAAGAGCTGTTTGGTCTCGGGGTATCCAACATAGTTGGCTCATTTTTCTCAGCCTATCCAACAACAGGTTCATTTTCTAGATCGGCTGTGAATCATGAAAGTGGAGCACAAACTGGCTTGTCGGGGATTGTCATGGGAGTCATAATAGGCTGTGCCCTTCTCTTCTTGACTTCATTGTTTGAAGATATACCCCAGTGTGCTCTGGCTGCGATTGTGATCTCTGCTGTCATGGGTCTGGTTGATTACCATGAGGCTATCTTTTTGTGGCATGTAGATAAGAAAGATTTCCTTCTTTGGACAATTACAAGCACTACAACATTATTTCTGGGTATTGAGATTGGAGTCCTAATTGGGGTGGGTTTTTCTCTTGCTTTTGTCATCCATGAATCTGCAAATCCACACATTGCTGTCTTGGGTCGTCTTCCAGGCACCACTGTCTATAGAAACATTAATCAGTACCCAGAAGCATATACTTATAATGGAATTGTAGTTGTTCGGGTCGATGCACCGATGTACTTTGCAAACATAAGCTACATAAAAGATAGGTTTCGGGAATATGAAGTTGAAGTCGATAGATCTTCTAGCCGTGGACCAGAAGTTGAAAGAGTCTATTTCGTAATTATAGAGATGGCACCTGTTACGTATATAGACTCTAGTGCTGTGCAAGCCTTGAAAGACTTACATCAAGAGTACAAACTGCGTGATATTCAGATTTCCATTTCGAATCCGAACCGAGAAGTTTTGCTGACCTTATCAAAATCAGGTGTGGTAGAGCTGATTGGCAAAGAGTGGTTCTTTGTAAGAGTCCACGATGCTGTTCAAGTTTGCCTTCAACATGTCGAGAGCGTAGAAGGAACAGAGAGGAAAGCTGATTCTTTACTCAAAGATACACCGAGTTTCTTGCAGAGGTTATTGAAACAGAGAGGCGAGGATTCATCGATCAGCGAGTTGGAGTCAGGCAGTCAAAAATCCGAATCTCAATTGGAACCGTTGCTGTCTCGTAAGTCTTGA 2007 44.34 MEITYASPSSTNLADSGGGGAPPSMPSTTRPVKIIPLQHPNAASPSSSSTSSSSSAAASFSKWTGKIKRLTWIEWMEILLPCSRWMRTYKWREYLQVDLVAGITVGIMLVPQSMSYAKLAGLEPIYGLYSAFVPLFVYAIFELAILLALMVGVCECLMGLLRLGWLIRFISHSVISGFTSASAIVIASSQIKYFLGYSVVRSSKIVPLIESIIAGADGFLWQPFLMGSILLAILLTMKHLGKTRKYLRFMRAAGPLTAVVLGTVFVEIFNPSSISLVGDIPQGLPSFSIPKGLDYVVTLIPTALLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNIVGSFFSAYPTTGSFSRSAVNHESGAQTGLSGIVMGVIIGCALLFLTSLFEDIPQCALAAIVISAVMGLVDYHEAIFLWHVDKKDFLLWTITSTTTLFLGIEIGVLIGVGFSLAFVIHESANPHIAVLGRLPGTTVYRNINQYPEAYTYNGIVVVRVDAPMYFANISYIKDRFREYEVEVDRSSSRGPEVERVYFVIIEMAPVTYIDSSAVQALKDLHQEYKLRDIQISISNPNREVLLTLSKSGVVELIGKEWFFVRVHDAVQVCLQHVESVEGTERKADSLLKDTPSFLQRLLKQRGEDSSISELESGSQKSESQLEPLLSRKS 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2277303 2282138 + Conep18aG0048200.1 Cone18ag0469 457430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0469 668 Pfam STAS domain 485 604 IPR002645 -
Cone18ag0469 668 SUPERFAMILY SpoIIaa-like 485 608 IPR036513 -
Cone18ag0469 668 MobiDBLite consensus disorder prediction 644 668 - -
Cone18ag0469 668 Gene3D STAS domain 464 612 IPR036513 -
Cone18ag0469 668 Pfam Sulfate permease family 142 434 IPR011547 GO:0016020(InterPro)
Cone18ag0469 668 Pfam Sulfate permease family 95 141 IPR011547 GO:0016020(InterPro)
Cone18ag0469 668 NCBIfam sulfate permease 142 604 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Cone18ag0469 668 ProSiteProfiles STAS domain profile. 484 608 IPR002645 -
Cone18ag0469 668 CDD STAS_SulP_like_sulfate_transporter 485 601 - -
Cone18ag0469 668 MobiDBLite consensus disorder prediction 646 661 - -
Cone18ag0469 668 MobiDBLite consensus disorder prediction 1 17 - -
Cone18ag0469 668 MobiDBLite consensus disorder prediction 1 32 - -
Cone18ag0469 668 PANTHER SULFATE TRANSPORTER 143 610 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone18ag0469 668 FunFam Sulfate transporter 31 464 611 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0469 Cone-Chr18:2277303 Cone7ag1578 Cone-Chr7:10808977 1.27E-108 dispersed
Cone11ag1108 Cone-Chr11:8619655 Cone18ag0469 Cone-Chr18:2277303 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0469 K18059 - mdm:103434544 1020.76