Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0498 ATGAGATATTATAATGAGAATATTACAGCAGTGCCACCACCATCTCCACCACTTGCAACCCAATTTTCAGTTACTTCACCTTCTTCCATGTCTTCTCCCAATTTTCCTTCCCCTGTTTCTCAATCATCTTCTACTCCTAGTCTTTCTCCACAACCACCATCTCCTCCTCCTCCTGCAACCGTTGTCCTCAGCCCATGTGCCGCTTGTAGGATCCTCCGCCGCCGGTGCGCCGATAAATGTATCTTAGCTCCATATTTTCCGCCCAATGCGCCGACAAAGTTCATCATTGCCCATAGAGTCTTTGGAGCTAGTAACATCATCAAGTTCTTGCAGGAAATTCCAGAGGATCATAGAGCGGATGCAGTTAGTAGTATGGTATACGAGGCGAAGGCACGGATCCGAGACCCGGTCTATGGATGTGCCGGTGCGATCTGCCATTTGCAAAAGCAAGTTAGCGAGCTACAAGCACAAGTGGCCAAGGTAGAAGCTGAGCTTGTGAACATGGAAGTCCAGCAAGCCAATTTGGTGGCTTTGATTTGTATGGAAATGAGACAATCTCAACAAACACCTAACTTCCAACAGCACCACCAACAACAACAACAAGATGACTGTGACATGAATTGTTTCTTGGATGACAACAATTTGGGCACTTCATGGGAACCTCTTTGGACATGA 675 46.67 MRYYNENITAVPPPSPPLATQFSVTSPSSMSSPNFPSPVSQSSSTPSLSPQPPSPPPPATVVLSPCAACRILRRRCADKCILAPYFPPNAPTKFIIAHRVFGASNIIKFLQEIPEDHRADAVSSMVYEAKARIRDPVYGCAGAICHLQKQVSELQAQVAKVEAELVNMEVQQANLVALICMEMRQSQQTPNFQQHHQQQQQDDCDMNCFLDDNNLGTSWEPLWT 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2433576 2434679 + Conep18aG0051100.1 Cone18ag0498 457459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0498 224 MobiDBLite consensus disorder prediction 21 47 - -
Cone18ag0498 224 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 64 200 - -
Cone18ag0498 224 ProSiteProfiles LOB domain profile. 64 165 IPR004883 -
Cone18ag0498 224 Coils Coil 151 171 - -
Cone18ag0498 224 MobiDBLite consensus disorder prediction 1 56 - -
Cone18ag0498 224 Pfam Lateral organ boundaries (LOB) domain 65 162 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0297 Cone-Chr18:1448190 Cone18ag0498 Cone-Chr18:2433576 2.31E-64 dispersed
Cone18ag0498 Cone-Chr18:2433576 Cone8ag1587 Cone-Chr8:11808670 8.44E-41 dispersed
Cone1ag1339 Cone-Chr1:56487374 Cone18ag0498 Cone-Chr18:2433576 1.27E-63 wgd
Cone11ag1283 Cone-Chr11:9521027 Cone18ag0498 Cone-Chr18:2433576 1.63E-64 wgd
Cone11ag1078 Cone-Chr11:8438866 Cone18ag0498 Cone-Chr18:2433576 3.98E-77 wgd
Cone18ag0498 Cone-Chr18:2433576 Cone5ag0326 Cone-Chr5:1378722 4.49E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45160 PF01593 Amino_oxidase 3.20E-08 CL0063 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0498 - - - 0.0