Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0502 ATGGGGAAGAAAGGTGGCTGGTTTTCTGCAGTGAAGAAAGCTCTTAATCCGGAAACAAATGGGAAGAAAGATCAGAAAACTGACAAACCAAGGAAGAAATGGTTTGGAAAGAGCAAGAAATCCGGCGTGACATCATTATCAGATCAAAGTCCTCTTCCTATAGAAGATCCAAAACTAATAGAAGCGGAAAATGAACAGAGCAAGCATGCTTACTCTGTGGCACTTGCCACGGCAGCGGCAGCAGAGGCAGCTGTGGCAGCAGCTCAGGCGGCAGCCGAGGTTGTCCGTCTCACCACTGTTCCTCAGTATCTTGGAAAGTCAAAGGAGGAAATAGCAGCCATTGTAATTCAGACAGCATTCCGTGGATATTTGGCAAGGAGGGCTTTAAGGGCACTAAGAGGATTGGTTCGGTTAAAATCACTGCTACATGGGCAATACGTTAGACGACAGGCAGCTAGCACATTAAAATGTATGCAAACCCTTGCTCGGTTACAGTTAGAGGTCCGTACAAGGAGGATTAGAATGTCTGAGGAGAACCGCGCTCTTCAACAGCATCTCGAACAAAAACGTGATAAAGAACTCGAAAAGTTCAAAGCTTATTTGGCAGAAGAATGGGATGATAGCATGAAATCGAAGGAGGAAGTTGAAGCAAAGCAACAGAATAGGCTTGAAGCAGCTGTGAGAAGAGAGAGAGCTTTGGCTTATGCGTTTTCTCATCAAGTACTACCTAAATTATTCCCTCAAATGCTGAAGAACTCGTCAAGATCAACAAACCCAACGTTCATGGACCCGAACAATCCGCACTGGGGATGGAGCTGGTTAGAGCGTTGGATGGCAGGCCGCCCTTGGGAAGAAACTAAATCATCCGCCGCTGATTTCCACGATCACACCTCGATCAAGAGCACCACATCACTCGGAGAAATCAACCGAGCTTATGCTAATAACAAGAAGCCTTCCCCAAGAAGCCCTACTAGTAAAAACCCTATCCGGGCTCCTTCAACTCCTTCCAGGGCACCATCTTCATTTTCCGGGGGTAGAAAAATAAAATCAGCCAGCCCTAAGGTGAGTGGTTGGGGTGGGGTCCATGGTGACGAGGACTCTAGGAGTATACTAAGTGTTAGGTCAGAGTATCATCGGAGGCATAGCATTGCTGGGTCATCGGTTCGGGACGATGATAGTCTTACAAGCTTGCAATCTGTTCCGAGCTATATGGCCCCCACAACGGCTGCTAAGGCCCGGTCGAGGTTATCAAGCCCATCAAGAATGGAAAAGGGGTCGATGGGTAGTGCAAAGAAGCGGCTTTCATTCACCGGTTCTCCAGTTCCTCCGAGGAGGCGGCATTCGGGGCCTCCAGCTGTTGATGCTGGCTCGATCAAAGCCTTTGGCGGGACCCGCACAGAGGACAAACTTGGTATTAACTTGGGAAGGTAG 1431 48.43 MGKKGGWFSAVKKALNPETNGKKDQKTDKPRKKWFGKSKKSGVTSLSDQSPLPIEDPKLIEAENEQSKHAYSVALATAAAAEAAVAAAQAAAEVVRLTTVPQYLGKSKEEIAAIVIQTAFRGYLARRALRALRGLVRLKSLLHGQYVRRQAASTLKCMQTLARLQLEVRTRRIRMSEENRALQQHLEQKRDKELEKFKAYLAEEWDDSMKSKEEVEAKQQNRLEAAVRRERALAYAFSHQVLPKLFPQMLKNSSRSTNPTFMDPNNPHWGWSWLERWMAGRPWEETKSSAADFHDHTSIKSTTSLGEINRAYANNKKPSPRSPTSKNPIRAPSTPSRAPSSFSGGRKIKSASPKVSGWGGVHGDEDSRSILSVRSEYHRRHSIAGSSVRDDDSLTSLQSVPSYMAPTTAAKARSRLSSPSRMEKGSMGSAKKRLSFTGSPVPPRRRHSGPPAVDAGSIKAFGGTRTEDKLGINLGR 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2449046 2452648 - Conep18aG0051500.1 Cone18ag0502 457463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0502 476 MobiDBLite consensus disorder prediction 304 347 - -
Cone18ag0502 476 Gene3D iswi atpase 104 133 - -
Cone18ag0502 476 PANTHER IQ-DOMAIN 5-RELATED 4 426 - -
Cone18ag0502 476 MobiDBLite consensus disorder prediction 1 52 - -
Cone18ag0502 476 Coils Coil 172 195 - -
Cone18ag0502 476 MobiDBLite consensus disorder prediction 17 31 - -
Cone18ag0502 476 MobiDBLite consensus disorder prediction 405 424 - -
Cone18ag0502 476 ProSiteProfiles IQ motif profile. 109 137 - -
Cone18ag0502 476 MobiDBLite consensus disorder prediction 405 476 - -
Cone18ag0502 476 MobiDBLite consensus disorder prediction 304 366 - -
Cone18ag0502 476 SMART iq_5 108 130 IPR000048 GO:0005515(InterPro)
Cone18ag0502 476 Pfam IQ calmodulin-binding motif 112 130 IPR000048 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0521 Cone-Chr11:2740499 Cone18ag0502 Cone-Chr18:2449046 3.61E-26 dispersed
Cone18ag0502 Cone-Chr18:2449046 Cone1ag0388 Cone-Chr1:3380608 8.30E-32 dispersed
Cone5ag1030 Cone-Chr5:4492038 Cone18ag0502 Cone-Chr18:2449046 5.24E-08 dispersed
Cone13ag1287 Cone-Chr13:9640477 Cone18ag0502 Cone-Chr18:2449046 1.07E-109 wgd
Cone18ag0502 Cone-Chr18:2449046 Cone19ag1272 Cone-Chr19:8667105 7.27E-114 wgd
Cone18ag0502 Cone-Chr18:2449046 Cone5ag0328 Cone-Chr5:1384439 2.71E-106 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0502 - - - 0.0