Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone18ag0517 | ATGGCTAAGGACTCAGGAGTGGCGGAGCAGGGTTCCTTCAACTCCAAGGACTACCACGACCCGCCTCCGGCGCCGCTCATCGACGGGGAAGAGCTGACTCGCTGGTCCTTCTACCGTGCCTTAATCGCCGAGTTCATCGCCACTCTTCTTTTCCTCTACATAACTGTCCTAACCGTGATTGGCTACAAAAGTCAAACTGATCACGCTGACCCTTGTGGTGGGGTCGGCGTTCTCGGCATCGCTTGGGCCTTTGGTGGCATGATCTTCGTCCTCGTCTACTGCACTGCTGGCATTTCCGGTGGTCATATTAACCCAGCAGTGACGTTTGGGCTGTTTTTGGCCCGTAAGGTGTCACTCGTCCGAGCCGTGTTGTACATGGTGGCTCAGTGCTTAGGAGCCATATGTGGAGTTGGGTTAGTCAAGGCCTTCCAGAAGGCCTACTTTGATAGATACGGTGGTGGGGCCAACGAGCTCCAGTCTGGCTACAGCAAAGGCACTGGATTGGGCGCTGAGATCATCGGAACCTTCGTTCTGGTCTACACCGTCTTCTCCGCCACTGATCCTAAAAGGAGTGCCCGAGATTCCCATGTTCCTGTATTGGCTCCGCTTCCGATTGGATTTGCAGTGTTTATAGTTCACTTGGCAACCATTCCTATTACCGGGACTGGTATCAACCCTGCTAGGAGTCTGGGATCTGCCCTTATTTACAACAAGGACAAAGCTTGGGATGACCTTTGGATATTCTGGGTGGGACCTTTTATTGGAGCAGCCATTGCAGCTTTCTACCATCAATTTGTATTGAGAGCCGGTGCTGTTAAAGCTCTTGGGTCGTTCAGGAGCAACCCTAGTGTGTAG | 855 | 52.75 | MAKDSGVAEQGSFNSKDYHDPPPAPLIDGEELTRWSFYRALIAEFIATLLFLYITVLTVIGYKSQTDHADPCGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVLYMVAQCLGAICGVGLVKAFQKAYFDRYGGGANELQSGYSKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGSALIYNKDKAWDDLWIFWVGPFIGAAIAAFYHQFVLRAGAVKALGSFRSNPSV | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 2534956 | 2537199 | - | Conep18aG0053100.1 | Cone18ag0517 | 457478 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone18ag0517 | 284 | CDD | MIP | 39 | 266 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone18ag0517 | 284 | PRINTS | Major intrinsic protein family signature | 39 | 58 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone18ag0517 | 284 | PRINTS | Major intrinsic protein family signature | 84 | 108 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone18ag0517 | 284 | PRINTS | Major intrinsic protein family signature | 121 | 140 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone18ag0517 | 284 | PRINTS | Major intrinsic protein family signature | 246 | 266 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone18ag0517 | 284 | PRINTS | Major intrinsic protein family signature | 170 | 188 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone18ag0517 | 284 | PRINTS | Major intrinsic protein family signature | 206 | 228 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone18ag0517 | 284 | Pfam | Major intrinsic protein | 31 | 263 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone18ag0517 | 284 | NCBIfam | MIP family channel protein | 43 | 263 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone18ag0517 | 284 | ProSitePatterns | MIP family signature. | 102 | 110 | IPR022357 | - | |
Cone18ag0517 | 284 | FunFam | Probable aquaporin PIP1-2 | 24 | 282 | - | - | |
Cone18ag0517 | 284 | SUPERFAMILY | Aquaporin-like | 31 | 268 | IPR023271 | - | |
Cone18ag0517 | 284 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 7 | 280 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Cone18ag0517 | 284 | Gene3D | Glycerol uptake facilitator protein. | 24 | 284 | IPR023271 | - | |
Cone18ag0517 | 284 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag0517 | Cone-Chr18:2534956 | Cone8ag1291 | Cone-Chr8:10585800 | 4.37E-155 | dispersed | |
Cone1ag1352 | Cone-Chr1:56550924 | Cone18ag0517 | Cone-Chr18:2534956 | 7.60E-183 | wgd | |
Cone1ag0730 | Cone-Chr1:6731374 | Cone18ag0517 | Cone-Chr18:2534956 | 2.81E-177 | wgd | |
Cone10ag0252 | Cone-Chr10:1213414 | Cone18ag0517 | Cone-Chr18:2534956 | 1.03E-180 | wgd | |
Cone18ag0517 | Cone-Chr18:2534956 | Cone3ag0280 | Cone-Chr3:1462429 | 5.40E-82 | wgd | |
Cone18ag0517 | Cone-Chr18:2534956 | Cone5ag0337 | Cone-Chr5:1440129 | 5.57E-184 | wgd | |
Cone18ag0517 | Cone-Chr18:2534956 | Cone5ag1231 | Cone-Chr5:5673499 | 7.25E-180 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone18ag0517 | K09872 | - | gmx:100815583 | 523.087 |