Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0555 ATGGCAATATTGCATCTGGACAGAGTTTATCATGCATTACTTGTATGTACAAAGCCAACAACTTTATGGGATCTCTATGCATTTGCATCCGGACCTTCCAAATACAATAACACTAACCCAAAAGATCGGTTACTAAATGAGTATTTTCGGCTTCTTGGAATGGGCTCCCATCATGCATTGATGAGCATGATTGAAGATGGATCGTTCACATTGTCCAACAACTTGTGGAGAATAACAAATGTAAATTTCAACTATGCAATGTGCCCGATTTATCCGTTTGCCTTGCTTGTTCTAAAAAGCATTACTGATGAAGAAGTGCTGCAGGCTTCCACCTTCCGTGCAAGATGTCGGCTTCCGGTAGCTTCATGGTGCCATCCTGTAACTGGAGCTGTTCTTGCACATTCATCTCAACCTCTGGTTGGATTCATGATGAATATGAAGAGTGAGAAAGACGAAGAGCTTGTTGCTGCACTCTGCTCACAACTAGCGGGTGGTAAGGAGTCACGAAGGAAGCTGTATATTTGCGATGCGAGGCTCAGAAAAAATACTTCAGTGAATGGAGCAATGGGAGGTGGCTCAGAGTCGTCTTCATATTATGTTCAATCAGAGATGGTTTTCTTTGGGATTGACAACATACATGCAATGAGGGATAGTCTTGCTCGGCTTAGAGATTACTTGGACACTCATGGGGCCACATCATCTGATGGAATGTATTCTTTCTTGAGACATGGTGGTTGGACTTGGAGTGGAGGGAATCTCAGTAGTATGTCTGCTTCGGTATCAACCCTTGGAGATAGTGGCTGGTTAATACATGTTCAAAATGTCTTGGCCGGTTCTTCATGGATTGCTGCCCGTGTTTTTCTGGAATCAGCATCAGTGCTTGTGCATTGTAGTGGTGGATGGGATAGAACTACTCAGCTGGTATCCCTTGCTAGTTTGCTGCTTGATCCGTACTATCGGACTTTTGCAGGTTTTCAGGCACTGGTTGAGAAGGATTGGCTAGCATTTGGTCATCCTTTCTCAGATCGGGTGAGCATGCCAACCATGTATGGAAGTGGAAATATGCCAGGTGAGTTATCTAGGCAGTCTTCCACTGGGAGTTTTTCATCATCACCAGCGCGACAGTCATCAGGATCATTCATGTCTCAAACTCCTAATCCTACTCCTCATGCACAGATGTTGAACAACTATTCTCCCATATATTTGCAGTGGGTTGATTGTGTTTCACAACTGATGCAGATGTATCCTTCTGCTTTCAAATTTTCCTCGGCTTTTCTGGTGGACTTGATGGACTCTGTACTTTCCTGCCGCTTTGGAAACTTCTTGTGTAATAGAATTTGTGGGTGCTTGTGGACATACATGGCAGAGCTGCATGCCTCAGAGGGAAGTTCTCATCATAACCTTTTCTATGACCCATATAAATATGATGGCCCTCTACAATCCCCAGCAGCAGCATTAGCCCCAACTGTGTGGCCCCAGTTCCATCTGCGTTGGGCCTGTCCATCAGAAGCCCAAGATGGGGAGGTTTACTCACAATATCGGAAAATGGCCATCAAGTTCTCTAAAATGCAGAAGGAAAAAGAAGTGGCAGAAAGGAAAGCCAGAGAAATGACCACTGCTCTGGAGTCTGTGAATGCGGAATTACGGAATGAAAGAAAGCTTAGCAGCTGA 1671 44.58 MAILHLDRVYHALLVCTKPTTLWDLYAFASGPSKYNNTNPKDRLLNEYFRLLGMGSHHALMSMIEDGSFTLSNNLWRITNVNFNYAMCPIYPFALLVLKSITDEEVLQASTFRARCRLPVASWCHPVTGAVLAHSSQPLVGFMMNMKSEKDEELVAALCSQLAGGKESRRKLYICDARLRKNTSVNGAMGGGSESSSYYVQSEMVFFGIDNIHAMRDSLARLRDYLDTHGATSSDGMYSFLRHGGWTWSGGNLSSMSASVSTLGDSGWLIHVQNVLAGSSWIAARVFLESASVLVHCSGGWDRTTQLVSLASLLLDPYYRTFAGFQALVEKDWLAFGHPFSDRVSMPTMYGSGNMPGELSRQSSTGSFSSSPARQSSGSFMSQTPNPTPHAQMLNNYSPIYLQWVDCVSQLMQMYPSAFKFSSAFLVDLMDSVLSCRFGNFLCNRICGCLWTYMAELHASEGSSHHNLFYDPYKYDGPLQSPAAALAPTVWPQFHLRWACPSEAQDGEVYSQYRKMAIKFSKMQKEKEVAERKAREMTTALESVNAELRNERKLSS 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2734967 2738460 - Conep18aG0057100.1 Cone18ag0555 457516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0555 556 CDD PTP-MTM-like 116 410 - -
Cone18ag0555 556 Coils Coil 520 554 - -
Cone18ag0555 556 MobiDBLite consensus disorder prediction 356 386 - -
Cone18ag0555 556 ProSiteProfiles Myotubularin phosphatase domain. 38 514 IPR010569 -
Cone18ag0555 556 Pfam Myotubularin-like phosphatase domain 70 444 IPR010569 -
Cone18ag0555 556 ProSitePatterns Tyrosine specific protein phosphatases active site. 295 305 IPR016130 GO:0016311(InterPro)
Cone18ag0555 556 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 69 499 IPR029021 -
Cone18ag0555 556 PANTHER MYOTUBULARIN-RELATED 8 542 IPR030564 GO:0004438(PANTHER)|GO:0106018(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0555 Cone-Chr18:2734967 Cone11ag1023 Cone-Chr11:8108516 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0555 K18081 - csv:101204839 832.017