Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone18ag0589 | ATGGGGGTTCAAACAATGGGATCACAAGGTGGGGGAGATAGTAACGGCAAACAATCCCAATTCCAGCCATTAGCTCGTCAAAGCTCGATGTATAGTCTCACTCTAGATGAGGTTCAAAACCAATTAGGTGACTTAGGAAAGCCGCTTAGCAGCATGAACCTAGATGAGCTACTCAAAAACGTATGGACAGTCGAGGCAAACCAATCATCCGTCGGTATGGATATCGAAGGCAATGGTGGCGGGACCGAATTGGTGAATCAGCCAGTGACACTTCAGCACCAGGCGAGCGTTTCATTAACCAGTGTGCTTAGCAAGAAAACAGTGGATGAGGTATGGAGAGATATCCAACAAAGCAAAGAAGGAAACGAGGGGGACAGGACGAAGAAGACGGCAAGGGAGAGGCAATCCACTCTGGGGGAGATGACGTTGGAGGACTTTTTGGTGAAAGCGGGTGTTGTAGCGGAAGCAGAAGGTTGTTCTAGTAAGAAAAGTAGTATGGAAGTAGTTGAGGGGGGAAATGTGGGGCCTCAATTTCCGGGACAGGCACAGCAGTGGGTGCAGTTCCCACAACAGAGTATGATGGGAGTTTATATTCCGGGCCTGCCTATGCATATGGATGGGCGTGGGATGGAAGTTGCTTATGGGGAGAATACGGTAGGAGTACCTTCTCCTTTGATGGGGACAGTGTCGGATTCTCAGATGGCTGGAAGGAAGAGGGGAAACCCAGAGGACATTATTGAGAAGACGGTTGAGAGGAGACAGAAGAGGATGATTAAGAATCGGGAATCGGCTGCTCGATCACGAGCTAGGAAGCAGGCTTATACTAATGAGCTGGAGAACAAGGTTTCGAGATTGGAGGAGGAAAACGAGAGGCTTAGGAAGCAGAAGGAACTGGAGAAGATGCTGGCAACTGCACCACCTCCCGAGCCAAAGTATCAGCTAAGGAGAACTGCATCTTCCCCGTTCTAA | 969 | 49.43 | MGVQTMGSQGGGDSNGKQSQFQPLARQSSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVEANQSSVGMDIEGNGGGTELVNQPVTLQHQASVSLTSVLSKKTVDEVWRDIQQSKEGNEGDRTKKTARERQSTLGEMTLEDFLVKAGVVAEAEGCSSKKSSMEVVEGGNVGPQFPGQAQQWVQFPQQSMMGVYIPGLPMHMDGRGMEVAYGENTVGVPSPLMGTVSDSQMAGRKRGNPEDIIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKELEKMLATAPPPEPKYQLRRTASSPF | 322 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 2935282 | 2938081 | + | Conep18aG0060500.1 | Cone18ag0589 | 457550 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone18ag0589 | 322 | Pfam | bZIP transcription factor | 252 | 301 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone18ag0589 | 322 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 250 | 295 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone18ag0589 | 322 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 26 | 320 | IPR043452 | GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro) | |
Cone18ag0589 | 322 | Coils | Coil | 268 | 302 | - | - | |
Cone18ag0589 | 322 | SUPERFAMILY | Leucine zipper domain | 252 | 297 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone18ag0589 | 322 | SMART | brlzneu | 248 | 316 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone18ag0589 | 322 | MobiDBLite | consensus disorder prediction | 114 | 135 | - | - | |
Cone18ag0589 | 322 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 255 | 270 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone18ag0589 | 322 | MobiDBLite | consensus disorder prediction | 259 | 322 | - | - | |
Cone18ag0589 | 322 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Cone18ag0589 | 322 | MobiDBLite | consensus disorder prediction | 259 | 300 | - | - | |
Cone18ag0589 | 322 | CDD | bZIP_plant_BZIP46 | 252 | 306 | - | - | |
Cone18ag0589 | 322 | Gene3D | - | 250 | 304 | - | - | |
Cone18ag0589 | 322 | FunFam | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | 250 | 302 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag0589 | Cone-Chr18:2935282 | Cone1ag1459 | Cone-Chr1:56983815 | 8.70E-132 | dispersed | |
Cone11ag1555 | Cone-Chr11:10840297 | Cone18ag0589 | Cone-Chr18:2935282 | 1.82E-70 | transposed | |
Cone11ag0988 | Cone-Chr11:7935542 | Cone18ag0589 | Cone-Chr18:2935282 | 5.97E-181 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45169 | PF13639 | zf-RING_2 | 2.00E-12 | CL0229 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone18ag0589 | K14432 | - | mdm:103438647 | 429.869 |