Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0600 ATGACTTCAAATAGACCCCTTTTGATTCCTTCCAGAACACCTGGAACACAAGAGCATCTTCCTCCCTTGCCCACTTTTCACGATCTAACAACCAAACCAGAACTGAGCAATTCCGGATCGGTAACAAGTATGGATTCTTCTAACCCAGTTGATAATTTCACAAATGTCGAATTGGGTCATCGCTCTTCACGAAGAAGTGCTAATTCACTCTACTCAAAATCCCAAGCTGGAAATTCGATAAGAGAAGTGAGTTTTGCCGATTTGGACTCAAAACCGGTCCGTTTTGGGTCGAGACGGGCCGATTCAGAAGCCCTTAGCGTTTCCCAGAAGGAGATCAAAGATGAAGATGCCAGGTTGGTCTATGTCAACGATCCCGTAAAGTCAAATGAGAGGTTTGACTTTGCGGGAAACTCAATCCGAACAGGGAAGTATTCATTCATCACTTTCTTGCCTCGGAATCTTTTCGAACAGTTTCATAGAGTTGCATACATATATTTCCTTGTCATTGCTGTTCTTAATCAATTGCCCCAACTTGCCGTTTTTGGCAGAGGAGTTTCTGTCCTTCCCTTGTCTTTCGTTTTGTTAGTTACTGCCGTTAAAGATGCATATGAGGATTGGAGAAGACATAGGTCGGATCAAATTGAGAATAACAGATTAGCCTTAGTTCTGGTCAATAATCAGTTTGAGTCAAAGAAATGGAAAGATATAAGAGTAGGCGAAATCATAAAACTCCAAGCAAATGAAACTATCCCTTGTGATATGGTCTTGCTCTCTACCAGTGATAGTACAGGAGTTGCCTATGTTCAAACGATTAATCTTGACGGGGAATCTAATTTGAAAACCCGTTATGCAAAGCAAGAGACTCTTTCTAAATTGCCTGAAAAGGAGGATTTTTCGGGATTGATTACTTGTGAAAAGCCGAATAGGAACATATATGGGTTTCAAGCATATATGGATATTGATGGGAAAAGACTTTCTCTTGGACCCTCTAATATTGTTCTTAGAGGATGTGAGCTCAAGAACACTACATGGGCCCTTGGAGTTGTGGTCTATGCTGGCCATGAGACCAAAGCTATGCTTAACAATTCAGGGGCCCCATCTAAGAGGAGCCGGCTTGAGACAAGCATGAACTTTGAAGTCATCCTTTTGTCCTTTTATCTTATTGCTTTGTGCACGGTTGTTTCAGTTTGCGCTGCTGTTTGGTTCATTAGAAAGGGGGATGAATTGGACAACTTGCCCTATTTCAGAAAGAAGGACTACTCAAAGACTCCACCTGATAATTATAACTTTTATGGGTGGGGAATGGATACTTTTTTCGTCTTTCTCATGTCTGTTATTGTCTTCCAAATAATGATCCCTATTTCTTTGTATATTTCCATGGAGCTTGTTCGGGTTGGTCAGGCCTATTTCATGATCCGTGATAGTATAATGTATGATAAGGCGTCCAATTCTAGGTTTCAATGTAGGGCATTGAATATAAATGAAGATTTGGGGCAAATAAGGTATGTATTTTCTGACAAAACTGGTACACTTACCGAAAACAAGATGGAATTTCAATGTGCAAGCATTTGGGGGGTTGATTATAATGGGAAAGCTAGTCCTGAAAACGAGCAAATTGGATACTCTGTTCAAGTGGATGGAAATGTTTTGAGACCGAAGATGAAGGTGAGGGTTGATCCCGAGCTTTTAAGGTTATCTGAAAGTGGAAAGGATAACAAGGAAGGAAAACATATTTATGATTTCTTTCTTGCATTGGCTACTTGCAATACTATTGTTCCGATAGTTACGGACACTTCCGATCCTTCTGTGAAGTTAATTGATTATCAGGGAGAATCTCCGGATGAACAGGCTTTGGTTTATGCAGCTGCGGCCTATGGTTTCATGCTTATAGAAAGAACTTCTGGCCATATAGTTGTTGACATCCATGGTGAAAGACAAAGGTTCAATGTTTTAGGTTTACACGAGTTTGATAGTGACCGGAAAAGAATGTCGGTGATATTGGGCTTCCCAGATAGGACCTTCAAAGTCTTTGTGAAAGGGGCAGACACCATCATGTTTAAGGTGACAGATAAATCTTCGAACCCGGAGATAATCCGATCTACTCAATCACACCTTCATGCTTATTCCTCACTTGGTTTGAGAACACTTGTCGTGGGTATGCGTGAATTGACTGTTCTAGAATTTGAGCAATGGCACTTGCTTTTCGAGGAAGCAAACACTGCCATAATTGGCCGGGCAGTTCACCTAAAAGAAGTAGCCACCAAAGTGGAAAATGATTTGACAATTCTTGGGGCATCTGGCATTGAGGACAAACTGCAAGATGGGGTTCCGGAAGCTATTGAGTCTTTGAGAATGGCCGGGGTTAAAGTATGGGTTTTGACTGGGGATAAGCAAGAAACTGCAATTTCGATCGGATACTCCTCAAAGCTTCTTACTAGGAGGATGACTCAACTTATAATCAATAGCAACTCTAAAGGGTCTTGTGAGAGGAGTTTGGACGAGGCGATTCTCATGTCGAAGAAGCTCTCAAACGGGCAAGCAGACCCACGTGATGGTGGAGAAAGCAATGGAGCCAATGCAAATTCCTCTGCCTTGATAATTGATGGCACTAGCCTTGTTCATATCCTAGACGGCGACCTCGAAGAAAAGTTATTCCAATTGGCTTCTAATTGTTCTGTGGTTCTATGTTGTCGGGTAGCTCCATTACAAAAAGCCGGAATCATTGCCCTTGTGAAAAGCCGGACTTCTGACATGACCCTTGCTATTGGAGATGGCGCTAATGACGTTTCAATGATCCAAATGGCTGATGTGGGGGTTGGGATTAGTGGGCAGGAGGGAAGACAAGCCGTAATGGCATCGGACTTTGCTATGGGTCAGTTCAAATTTTTGGTCCCCCTTCTATTGGTCCATGGCCATTGGAATTATCAGAGAATGGGATACATGATTTTATACAACTTTTACAAGAGTGCGGTGATGGTCCTTATATTGTTTTGGTACGTGCTATTTACATGTTTTTCCTTGACAACTGCAATCAACGAGTGGAGCAGTATGCTATATTCTATAATCTACACCTCACTGCCCACAATTATAGTTGGAATGCTTGACAAGGATCTGAGCAGAAGGACTCTAATGAAGTATCCTCAGCTTTATGGGGCAGGCCAGAGGAAAGAGGCCTACAACCGGAAACTCTTTTGTCTAACAATGGCAGACACATTGTGGCAAAGCGTGGTCATTTTCTTCATCCCCCTCTTGGCCTATTGGAAGAGTACTATTAGCATTTCGAGCATAGGAGATCTTTGGACCATCGCCTTGGTCATTGTGGTAAATTTACACTTGGCCATGGATGTTACCCGTTGGAATTGGCTCGTTCATTTGGTCATTTGGGGTTCTATTGTTGCCACCTTCATTTGCATCTTCATTATCGATGCTTTACCTATGTTATTCGGTTACTGGGCAATATTCCATGCCATGTCGGAAGCATCGTTTTGGCTATGCTTGCTGATAATTATAGTAGCAGCCGTAGTTCCCCGTTTCATTGTAAAGTATGTACATCAATATTATATGCCGTCCGATATTCGGATTGCGAAAGAAGTTGAGAAGAATGAAAGTGATCAAAGGGAATTAGGAGGAAATGTACAGATAGAAATGAACCCTTTGCATCAGTGA 3666 41.98 MTSNRPLLIPSRTPGTQEHLPPLPTFHDLTTKPELSNSGSVTSMDSSNPVDNFTNVELGHRSSRRSANSLYSKSQAGNSIREVSFADLDSKPVRFGSRRADSEALSVSQKEIKDEDARLVYVNDPVKSNERFDFAGNSIRTGKYSFITFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSVLPLSFVLLVTAVKDAYEDWRRHRSDQIENNRLALVLVNNQFESKKWKDIRVGEIIKLQANETIPCDMVLLSTSDSTGVAYVQTINLDGESNLKTRYAKQETLSKLPEKEDFSGLITCEKPNRNIYGFQAYMDIDGKRLSLGPSNIVLRGCELKNTTWALGVVVYAGHETKAMLNNSGAPSKRSRLETSMNFEVILLSFYLIALCTVVSVCAAVWFIRKGDELDNLPYFRKKDYSKTPPDNYNFYGWGMDTFFVFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDSIMYDKASNSRFQCRALNINEDLGQIRYVFSDKTGTLTENKMEFQCASIWGVDYNGKASPENEQIGYSVQVDGNVLRPKMKVRVDPELLRLSESGKDNKEGKHIYDFFLALATCNTIVPIVTDTSDPSVKLIDYQGESPDEQALVYAAAAYGFMLIERTSGHIVVDIHGERQRFNVLGLHEFDSDRKRMSVILGFPDRTFKVFVKGADTIMFKVTDKSSNPEIIRSTQSHLHAYSSLGLRTLVVGMRELTVLEFEQWHLLFEEANTAIIGRAVHLKEVATKVENDLTILGASGIEDKLQDGVPEAIESLRMAGVKVWVLTGDKQETAISIGYSSKLLTRRMTQLIINSNSKGSCERSLDEAILMSKKLSNGQADPRDGGESNGANANSSALIIDGTSLVHILDGDLEEKLFQLASNCSVVLCCRVAPLQKAGIIALVKSRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFKFLVPLLLVHGHWNYQRMGYMILYNFYKSAVMVLILFWYVLFTCFSLTTAINEWSSMLYSIIYTSLPTIIVGMLDKDLSRRTLMKYPQLYGAGQRKEAYNRKLFCLTMADTLWQSVVIFFIPLLAYWKSTISISSIGDLWTIALVIVVNLHLAMDVTRWNWLVHLVIWGSIVATFICIFIIDALPMLFGYWAIFHAMSEASFWLCLLIIIVAAVVPRFIVKYVHQYYMPSDIRIAKEVEKNESDQRELGGNVQIEMNPLHQ 1221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3025610 3030570 + Conep18aG0061600.1 Cone18ag0600 457561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0600 1221 CDD P-type_ATPase_APLT_Dnf-like 136 1082 - -
Cone18ag0600 1221 ProSitePatterns E1-E2 ATPases phosphorylation site. 506 512 IPR018303 -
Cone18ag0600 1221 PRINTS P-type cation-transporting ATPase superfamily signature 922 941 - -
Cone18ag0600 1221 PRINTS P-type cation-transporting ATPase superfamily signature 504 518 - -
Cone18ag0600 1221 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 108 1199 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cone18ag0600 1221 Pfam Phospholipid-translocating ATPase N-terminal 120 185 IPR032631 -
Cone18ag0600 1221 MobiDBLite consensus disorder prediction 30 73 - -
Cone18ag0600 1221 SUPERFAMILY Calcium ATPase, transmembrane domain M 136 1189 IPR023298 -
Cone18ag0600 1221 Gene3D - 607 762 IPR023299 GO:0000166(InterPro)
Cone18ag0600 1221 FunFam Phospholipid-transporting ATPase 759 962 - -
Cone18ag0600 1221 SFLD Haloacid Dehalogenase 488 973 - -
Cone18ag0600 1221 SUPERFAMILY Calcium ATPase, transduction domain A 217 358 IPR008250 -
Cone18ag0600 1221 MobiDBLite consensus disorder prediction 1 73 - -
Cone18ag0600 1221 SUPERFAMILY HAD-like 499 977 IPR036412 -
Cone18ag0600 1221 Pfam E1-E2 ATPase 220 460 - -
Cone18ag0600 1221 NCBIfam HAD-IC family P-type ATPase 874 1006 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone18ag0600 1221 NCBIfam phospholipid-translocating P-type ATPase 134 1197 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cone18ag0600 1221 Pfam Cation transport ATPase (P-type) 610 687 - -
Cone18ag0600 1221 Pfam Phospholipid-translocating P-type ATPase C-terminal 950 1190 IPR032630 -
Cone18ag0600 1221 SFLD p-type atpase 488 973 IPR044492 -
Cone18ag0600 1221 Gene3D - 190 361 - -
Cone18ag0600 1221 FunFam Phospholipid-transporting ATPase 607 740 - -
Cone18ag0600 1221 FunFam Phospholipid-transporting ATPase 192 361 - -
Cone18ag0600 1221 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 510 776 IPR023299 GO:0000166(InterPro)
Cone18ag0600 1221 Gene3D - 763 962 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0447 Cone-Chr10:2076438 Cone18ag0600 Cone-Chr18:3025610 0 dispersed
Cone18ag0600 Cone-Chr18:3025610 Cone3ag0482 Cone-Chr3:2347796 0 dispersed
Cone11ag0980 Cone-Chr11:7892699 Cone18ag0600 Cone-Chr18:3025610 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0600 K14802 - mdm:103420527 1831.61