Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0623 ATGGAGAAGAAGAAGTATCCCGTAGGAGCAGAGCATTATACTCTGCATGAAGAGATCGGGCAGGGTGTGAGTGGCTCGGTGCACCGAGCTCTCTGTAAACCTTATGACGAGATAGTCGCCATTAAGATCCTTGATTTGGAGCGTGCTGATTGTGATCTGTTCAACATTTCCCGAGAAGCACAAACGATGATCATGGTTGACCATCCTAACGTGCTTAAATGCCACTGTTCCTTTGTTAGTGACTATAGTCTGTGGATTGTTATGCCCTACATGTCTGGAGGCTCGTGTCTACACATTTTAAAAGCCGCATACCCGACTGGTTTTGGGGAGGTGGTTATAGCAACAATATTGAAGGAGGTATTAAAGGGTTTAGAGTATCTTCATAATCAGGGACACATACATCGGGATGTCAAAGCCGGGAATATACTCATTGGCTCCCGTGGTACGGTCAAGCTGGGGGATTTTGGGGTTTCTTGTTGCCTTTTTGATTCGTGCGATAGGCATCGCATGAGGAATACATTTGTGGGGACACCTTGCTGGATGGCGCCTGAGGTTATGGAGCAGCTACATGGTTATGATTTCAAAGCGGACATCTGGTCTTTTGGAATAACTGCTTTAGAGCTCGCCCGTGGCAATGCGCCTTTCTCACAGTATCCCCCAATGAAGGTTCTTCTGATGACTCTACAGAATGCTCCTCCAGGTCTTGATTATGAAAGGGATCGGAAATATTCAAAGCATTTTAAGCAGATGATTGCTATTTGCTTGGTAAAAGACCCTGTAAAACGCCCTTCTGCAAAGAAATTGCTAAAGCATCCTTTCTTCAAGCAAGCCAAGTCAAATGATTATATTGTGCGTACCCTTTTGGAGGGCCTACCAAATCTTGGCGATCGCATTAAGGCATTGAAGAAAAAAGAGGAAGATATGGTAGCTCAGAAGAAAATGCCTGATGGGGAGAAGGAGGAAATATCACAGAATGAATATAAACGAGGAATTAGTGTGTGGAACTTCGATCTTGAAGATGTAAAGGCTCAGGCATCCCTGATCCAAGATAATGATGACATGATATCTAGCTCAAATTCCTTTGTTATACTTGATGGGGAAGAAAAAACTTCACAATGTCAAAGCTCCTCTCAAGCTGCAGATTCGGAGTGGAATGATAAGATGCCAAATCAAGCAGTTCCTCTTCCCTCGGTTGACCCGACGTCTAATGATATGAAGTCATATCATGAGGACCGTACTATGCTTAATTCTTCTCCCAAGCATGATGCTCGCGCTGGAAATAGTTCATCTGAAATACAGGAATTGGAGTTCAGTGGAGGAACTTTAGAGTGTGCAGCCAGTTCTAGTGATCAACAAAATAATGTTTCAGCCGGAGGCACATTACTAGAAGTTTCTGTTTCACCTACTAAAAGAGACAGAGATAAGTTGCAAAATCAGCTACAGAACATCCCAAATTGCAGTTCTTCTACTCTTCCACAAGCAGTGGATGATATGCCTTCTGAAGTTTCTTCTTCAAGTAGTAGTGAACTTGATGAGAAGGGAAGGTCACCAGTTGTGCAACAGAAAGGGCGTTTCAAAGTTACATCTGAGAATGTTAGCATAGAAAAGGTGGCCCCTACTCCTATACTCCTTAAGAGTCAGAGCATGCAGGTGATAACTACTCCGTATTCCACAATTTCCAATCCTTCAACTCCGCTACTCTCACCTCTACCTTCACCATCTGCTAGGACATCAACTCTTTCTGGCCCTTCTACTTTTCACCTGTTGCATTCTATTTTGCAGTCAAATATTAATCAGGGGGAGAATATTTTAAGCATAATGAAGCATGTTGCTACTCTGGGCGACTTTGCAGTCAAAGCAGGATGTTCGGCATCTCATGTTGCAGCGGTGGAGAAATCTTTGCTTGAAGCAGCTCATGACCGGGAAACACAATTACTTAATGAAATAACCGATTTGCAGTCGAGGCTCACAAGTGCCCAAGCTGAGCTTCAAAAATTAAGAACAGAAAACACTAAAGGTTAA 2022 43.32 MEKKKYPVGAEHYTLHEEIGQGVSGSVHRALCKPYDEIVAIKILDLERADCDLFNISREAQTMIMVDHPNVLKCHCSFVSDYSLWIVMPYMSGGSCLHILKAAYPTGFGEVVIATILKEVLKGLEYLHNQGHIHRDVKAGNILIGSRGTVKLGDFGVSCCLFDSCDRHRMRNTFVGTPCWMAPEVMEQLHGYDFKADIWSFGITALELARGNAPFSQYPPMKVLLMTLQNAPPGLDYERDRKYSKHFKQMIAICLVKDPVKRPSAKKLLKHPFFKQAKSNDYIVRTLLEGLPNLGDRIKALKKKEEDMVAQKKMPDGEKEEISQNEYKRGISVWNFDLEDVKAQASLIQDNDDMISSSNSFVILDGEEKTSQCQSSSQAADSEWNDKMPNQAVPLPSVDPTSNDMKSYHEDRTMLNSSPKHDARAGNSSSEIQELEFSGGTLECAASSSDQQNNVSAGGTLLEVSVSPTKRDRDKLQNQLQNIPNCSSSTLPQAVDDMPSEVSSSSSSELDEKGRSPVVQQKGRFKVTSENVSIEKVAPTPILLKSQSMQVITTPYSTISNPSTPLLSPLPSPSARTSTLSGPSTFHLLHSILQSNINQGENILSIMKHVATLGDFAVKAGCSASHVAAVEKSLLEAAHDRETQLLNEITDLQSRLTSAQAELQKLRTENTKG 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3194144 3199412 - Conep18aG0063900.1 Cone18ag0623 457584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0623 673 MobiDBLite consensus disorder prediction 478 514 - -
Cone18ag0623 673 SMART serkin_6 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0623 673 MobiDBLite consensus disorder prediction 420 436 - -
Cone18ag0623 673 FunFam serine/threonine-protein kinase BLUS1 isoform X1 94 327 - -
Cone18ag0623 673 Coils Coil 635 669 - -
Cone18ag0623 673 MobiDBLite consensus disorder prediction 404 418 - -
Cone18ag0623 673 MobiDBLite consensus disorder prediction 367 385 - -
Cone18ag0623 673 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 671 IPR047173 GO:0043539(InterPro)
Cone18ag0623 673 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Cone18ag0623 673 MobiDBLite consensus disorder prediction 367 436 - -
Cone18ag0623 673 FunFam Serine/threonine-protein kinase BLUS1 2 90 - -
Cone18ag0623 673 MobiDBLite consensus disorder prediction 478 523 - -
Cone18ag0623 673 SUPERFAMILY Protein kinase-like (PK-like) 11 275 IPR011009 -
Cone18ag0623 673 CDD STKc_OSR1_SPAK 11 274 - -
Cone18ag0623 673 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524(InterPro)
Cone18ag0623 673 Pfam Protein kinase domain 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0623 673 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0623 673 Gene3D Transferase(Phosphotransferase) domain 1 94 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0279 Cone-Chr17:1338830 Cone18ag0623 Cone-Chr18:3194144 1.16E-248 dispersed
Cone18ag0623 Cone-Chr18:3194144 Cone20ag1129 Cone-Chr20:7711788 2.01E-251 dispersed
Cone11ag0941 Cone-Chr11:7685584 Cone18ag0623 Cone-Chr18:3194144 0 wgd
Cone18ag0623 Cone-Chr18:3194144 Cone4ag0275 Cone-Chr4:1234844 1.01E-10 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82319 PF00916 Sulfate_transp 3.10E-87 CL0062 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0623 K08835 - gmx:100780339 795.808