Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0629 ATGTCATGTTATTACGGCCGGAGGATGATCGTGATCAAGGGGGAGTTTGAAAAAAGGGGAGGAAAAATGAAAACTCATGACGGGTTAGAAATTCTGATGGTAGAGGTATTCAAATTTTCCCTATTCGTTTTAGGGCTTCTTCTTCTATCAGCGACAACCTCCTCATATGGTGAATCGTCGACCTGTTTGATGGTGTACAAAGAAGGCGGCGCTCCGGCGGTTTTTCAATCGCCGAAATGCCCTCGTTGGAAGCTCTCCGACTACGCTTCACGGCCTCCAAGCACAGCTCGCTGTCAAATTGCCATGATGCAGGGTCGAAGAAAATCTCAGGAGGATCGCGCTATTTGTGCCCTCGATCTTCGCATTCCTTTTCCTGGTTCGGCAGGGATAAAGGACGTTACAGTAGGAATTATGGCAGTCTTTGATGGTCATAATGGTGCGGAAGCAAGTGAAATGTCCTCCAAGCTTTTGTTGGAGTATTTTGTCGTACATACTTATTTTCTTCTGGATGCAACTTATTCTTCTTTGTTCACAAGATCCACTGGAAAATTGCCAGACAAGAGAGAGATAGATGCAATTTTTCATATGATTAATTGGAATGGGGAAATAGGTCGACATCTATTGGACATTGGAAGATTCAAGTACTCATTGCCAGCAGACTTCGATGATTCTTTCCACTTGGAAATGTTGAAGGAATCATTGTTGAGGGCGATCCATGATATTGATGCAACGTTTTCCAGGGAAGCATCTAGACGCAATCTTGATTCTGGCTCGACAGCCACAATTATTCTAATAGCAAATGCCCAAGTTTTAGTTGCCAATATTGGAGACTCGAAGGCTTTTTTGTGCTCCGAGAAATTTCAGTCACCTGCAGAGGCCAAAGCTACCTTTCTGAGGCTATACAGGAAGAAAAGACAGAATGGAGACATTTCACATACAAGAGAAACCTATAAAACAGGTCCATCCAATGGACTAGTGCGGTTTCTTGTAAAGGAGTTGACCAGAGATCATCATCCAGATAGAGATGATGAAAAGTCTAGAGTGGAAACTGCAGGTGGGCATGTTATTGAACGAGGTGGCATACCTCGTGTAAATGGCCAGCTGGCAATTTCCCGAGCCATTGGTGATGTGTCATTTAAAAGTTATGGGGTTATATCTTCACCGGAGGTGACAGATTGGCAGCCTTTGACCGCGAATGATAGCTATCTGATTGCTGCATCTGATGGTGTTTTCGAGAAGTTGAGCTCACAGGATGTATGTGATTTGCTTTGGGATGTGCACAATCATGATTCCTTGAGTTCAGAGCTCTCTTCTTCATGTGCATACTCTTTGGCCGATTGCATCGTGGATACTGCTTTTGAAAAGGGCAGTATGGATAATGTGGCAGCTATTGTGGTTCCTTTGGGATCTACAGGCATTTCTAAAACATTACAAGAGGAAGATTGTGTTGGAGAGGGAGACAAAGCTTATCCGATATCTGGGCTACGGAAAGCGGTGTATGACCTCTCAGTTGATGTCCCTTCCTACCTAGTGCAGTTGGAGCATGCTCATCCAGCTATGTCCAAGCTTAAGAGGTTACTGGTTGAAAGAAAAAATAGCAATTTTGGATGCTTTTATTTATCTGAGAACCTAGACGAATACAAGGACTACACATGTCACGATCAAAATGAGGATTTGGAAGATTTTGTGTTTGACCCACCCCAGGCTCTACCGGATGTCATTGATCAGCATTTTGGTGGCTCTCTAAATGTGTACACTGAGCAAAACATCTGCTTTCATCTCGGTTTCTCTGTTGACGGAATTAAAGATCAATGCATAAACCCACAAGGCTTTGCTAATTTTCTCGGTTTGCTTGAATCGATTCCTTTTCACAATGGTGCCTCCAACCATGAATCAAATGAGTATTCAATGCCTGACATGAGGTATGTGCTAAAAAAGAGGTTTGGTCGTGGATCTTATGGTGAAGTATGGCTGGCTTACAATTGGAATTGTCGCGAAGGCAACAATGACACAAATGGGAATGGAAAAAATGATAATACTTCATTCGACTCGAACGTGAAAGATAATAGCTCATCTAATCCTAATTGTCAAGCAGGTCATCCTCCTGAAGATAACTTATTCATCATGAAACGAATAATGGTGGAGAGAGGGCCTGCATTTTATCTCAGTGGCTTGAGGGAGAAGTATTTTGGCGAAGTATTTTTAAATGCTTCCACATGTCTTGGAGGTATGCTATCAGCTGAAATACCAGATACCTTTTCAGAAGAATCACGATTTGGGTTTTTTGACCCATTAGTAGAAAATGAATCAATGCTCCATGAGATTGGCAACACTAGGGGTTTTGACCGCATGTTTCCCAATCAGTTTCGATCGAGAAGACCCATCTATGAAGAAGGTTTAAGTCATGTTGCAAGATATGTTGAATCTTTTGAATCTCGATCTAAAGAAATATGGCTTGTGTTTCGTCATGAGGGTATATCCTTGTCAAAGCTCATTTATACAGTTGATGAGATAGATGATACTGGTGAGGAGTCAGAAAGAGTTGAACAAGGAAAACATTTTCAAATATTACGTCCTTCTAAATGGTGGCACTGGTTGAAAACAACAAAAGCAGGACAAGAGCAAATGAGACATATGATATGGCAGCTGTTGATGGCTCTTAAGTCCTGTCATGACCGCAATATCACCCACAGAGATATTAAACTTGAGAACATGGTGATATGCTTTGAAGATCCTGTTACTGGGAAATGCTTCTTAAAAGGAAGCCCAAGTGGAGAGGAGAGCTTCATGACCAAAGTGCGCATCATTGACTTTGGTAGTTCTATAGACGAGTTCACGCTGAAGCATTTATATGGACCTACTGGACCTTCAAGGGCCGAACAGACTTATGAGTACTCTCCCCCTGAGGCCTTGCTTAATTCCACTTGGTATCAGGAAACAACAAGCACAACTTTGAAGTATGATATGTGGAGCGTTGGTGTTGTGATGTTGGAATTGATCTTAGGATCACCCAATGTTTTCATAATAAGTTCTTACACACGCACTCTGTTAGACCAGCATCTTGATGGTTGGAGTGGAGGCTTAAAGGAGCTTGCATATAAGCTTAGATCATTCATGGAATTATGTATTTTAACTGCGGGAAGTTCCTCCAAGCATCATCAAAGAATGGATCAACCTACAGGAATGCCAGCATCCTGGAAATGCTCTGAAGAAGTTTTCTCTCATTATATAAAGAGGAGAGATCCTCTTAAACTAGGGTTCCCAAATATCCAAGCTTTACGGTTAGTGCGCCATCTTCTACTTTGGAATCCAGAGGATCGTTTCAGCGTTGATGATGCCTTACAGCATCCTTATTTTAATCCTCCTCCCAAAGGTTGA 3378 42.16 MSCYYGRRMIVIKGEFEKRGGKMKTHDGLEILMVEVFKFSLFVLGLLLLSATTSSYGESSTCLMVYKEGGAPAVFQSPKCPRWKLSDYASRPPSTARCQIAMMQGRRKSQEDRAICALDLRIPFPGSAGIKDVTVGIMAVFDGHNGAEASEMSSKLLLEYFVVHTYFLLDATYSSLFTRSTGKLPDKREIDAIFHMINWNGEIGRHLLDIGRFKYSLPADFDDSFHLEMLKESLLRAIHDIDATFSREASRRNLDSGSTATIILIANAQVLVANIGDSKAFLCSEKFQSPAEAKATFLRLYRKKRQNGDISHTRETYKTGPSNGLVRFLVKELTRDHHPDRDDEKSRVETAGGHVIERGGIPRVNGQLAISRAIGDVSFKSYGVISSPEVTDWQPLTANDSYLIAASDGVFEKLSSQDVCDLLWDVHNHDSLSSELSSSCAYSLADCIVDTAFEKGSMDNVAAIVVPLGSTGISKTLQEEDCVGEGDKAYPISGLRKAVYDLSVDVPSYLVQLEHAHPAMSKLKRLLVERKNSNFGCFYLSENLDEYKDYTCHDQNEDLEDFVFDPPQALPDVIDQHFGGSLNVYTEQNICFHLGFSVDGIKDQCINPQGFANFLGLLESIPFHNGASNHESNEYSMPDMRYVLKKRFGRGSYGEVWLAYNWNCREGNNDTNGNGKNDNTSFDSNVKDNSSSNPNCQAGHPPEDNLFIMKRIMVERGPAFYLSGLREKYFGEVFLNASTCLGGMLSAEIPDTFSEESRFGFFDPLVENESMLHEIGNTRGFDRMFPNQFRSRRPIYEEGLSHVARYVESFESRSKEIWLVFRHEGISLSKLIYTVDEIDDTGEESERVEQGKHFQILRPSKWWHWLKTTKAGQEQMRHMIWQLLMALKSCHDRNITHRDIKLENMVICFEDPVTGKCFLKGSPSGEESFMTKVRIIDFGSSIDEFTLKHLYGPTGPSRAEQTYEYSPPEALLNSTWYQETTSTTLKYDMWSVGVVMLELILGSPNVFIISSYTRTLLDQHLDGWSGGLKELAYKLRSFMELCILTAGSSSKHHQRMDQPTGMPASWKCSEEVFSHYIKRRDPLKLGFPNIQALRLVRHLLLWNPEDRFSVDDALQHPYFNPPPKG 1125
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3239120 3249171 + Conep18aG0064500.1 Cone18ag0629 457590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0629 1125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 895 907 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone18ag0629 1125 Gene3D Transferase(Phosphotransferase) domain 1 859 1120 - -
Cone18ag0629 1125 Gene3D - 93 473 IPR036457 -
Cone18ag0629 1125 MobiDBLite consensus disorder prediction 670 701 - -
Cone18ag0629 1125 Pfam Protein phosphatase 2C 224 285 IPR001932 -
Cone18ag0629 1125 Pfam Protein phosphatase 2C 331 461 IPR001932 -
Cone18ag0629 1125 CDD PP2Cc 103 468 IPR001932 -
Cone18ag0629 1125 ProSiteProfiles PPM-type phosphatase domain profile. 97 468 IPR001932 -
Cone18ag0629 1125 PANTHER PROTEIN PHOSPHATASE 92 467 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone18ag0629 1125 SMART serkin_6 642 1119 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0629 1125 SMART PP2C_4 89 466 IPR001932 -
Cone18ag0629 1125 Pfam Protein kinase domain 846 1119 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0629 1125 SUPERFAMILY PP2C-like 94 469 IPR036457 -
Cone18ag0629 1125 MobiDBLite consensus disorder prediction 670 699 - -
Cone18ag0629 1125 SUPERFAMILY Protein kinase-like (PK-like) 641 1121 IPR011009 -
Cone18ag0629 1125 ProSiteProfiles Protein kinase domain profile. 642 1119 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0629 Cone-Chr18:3239120 Cone1ag1257 Cone-Chr1:56127181 6.96E-14 dispersed
Cone18ag0629 Cone-Chr18:3239120 Cone17ag0937 Cone-Chr17:7332025 2.10E-19 transposed
Cone18ag0629 Cone-Chr18:3239120 Cone20ag0280 Cone-Chr20:1254286 2.09E-19 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82320 PF00831 Ribosomal_L29 2.80E-17 CL0346 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0629 - - - 0.0