Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0631 ATGATAATTAACGTGAAGGAATCGACGATGGTGAAGCCATCAGGAGAGACACCGAAGCGGAGCTTGTGGATTTCGAACGCGGATTTACTGGTGCCTCACGTGCATACTCCAAGTGTATATTTCTACAGGCCAACTGGTTCCCCCAGTTTCTTTGATTCTAGGGTTCTTAAGGAGGCGCTTAGTAAGGCTCTGGTGCCGTTTTACCCCGTGGCTGGTCGATTGAAGAGAGACGAAGACGGTCGAATTGAGATTGATTGTAATGCAGAAGGAGCGCTGCTTGTTGAAGCTGAGACCAGAGCGGTTATTGATGATTTTGGCGATTTTGCGCCTACTTTGAAGCTCAGGCTGCTTATTCCTACTGTGGATTATTCTCGTGGGATCGAGTCTCATCCTCTCTTGATCTTGCAGGTTACTCACTTTAAATGTGGTGGGGTCTCACTTGGTGTTGGAATGCAACACCCTTTAGCAGATGGATTCTCCGCTATCCATTTCATAAACACATGGTCCGATATGGCTCGTGGGCTTGACCTAACAATCCCTCCTTTCATCGACCGGACTCTCCTCCGAGCCCGGGACCCACCTCAACCTTCATTCGAACACATCGAATATGAACAGGCCCCAACCATGAATGCCCCCCTACAAGGATCAATTCCGAAGGACACAACAGTCTCCATATTCAAAATGACCAGAGACCAGCTCAACATCTTAATGGCCAAGTCCAAGGAAAACGGCAACACAATAAAATACAGCTCATTTGAGATGTTATCGGGCCATGTGTGGAGATGTGCATGCATGGCCCGTGGGCTCCCAGACGATCAAGTAACCAAGTTGTATGTCGCGATGGATGGTCGGTCCAGATTGCGTCCTCCTCTCCCGGCCGGTTACTTCGGCAATGTGATCTTGACAACTACACCTAAAGCATTAGCAGGTGATTTACAGGCAAAACCGACATGGTATGCTGCAAGTAGGATCCATGATGTATTGAAGAGAATGGATGATGAGTACTTCAAATCGGCCCTCGATTATCTAGAGCTACAACCTGATCTCTCGGGCTCGGCTCTTGTTCGTGGGGCCCATATTTTTAGGTGTCCGAACCTTGGCATTAGTAGCTGGGTTAGGCTGCCTATCCATGATGCTGATTTTGGGTGGGGCCGGCCGATTTTTATGGGACCCGGTGGGATTGCTAATGAGGGTCAATCGTTTATCATACCTAGTCCTACTGACGATGGGAGCCTGTCGGTGGCCCTTTGCCTGCAAACTGAACACATGAAAGTGTTTGAGAAATTGTTGTATGAAATCTAA 1302 48.39 MIINVKESTMVKPSGETPKRSLWISNADLLVPHVHTPSVYFYRPTGSPSFFDSRVLKEALSKALVPFYPVAGRLKRDEDGRIEIDCNAEGALLVEAETRAVIDDFGDFAPTLKLRLLIPTVDYSRGIESHPLLILQVTHFKCGGVSLGVGMQHPLADGFSAIHFINTWSDMARGLDLTIPPFIDRTLLRARDPPQPSFEHIEYEQAPTMNAPLQGSIPKDTTVSIFKMTRDQLNILMAKSKENGNTIKYSSFEMLSGHVWRCACMARGLPDDQVTKLYVAMDGRSRLRPPLPAGYFGNVILTTTPKALAGDLQAKPTWYAASRIHDVLKRMDDEYFKSALDYLELQPDLSGSALVRGAHIFRCPNLGISSWVRLPIHDADFGWGRPIFMGPGGIANEGQSFIIPSPTDDGSLSVALCLQTEHMKVFEKLLYEI 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3256509 3258936 - Conep18aG0064700.1 Cone18ag0631 457592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0631 433 FunFam Tryptamine hydroxycinnamoyl transferase 208 431 - -
Cone18ag0631 433 Gene3D - 213 433 IPR023213 -
Cone18ag0631 433 Gene3D - 1 205 IPR023213 -
Cone18ag0631 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 424 IPR050317 GO:0016747(PANTHER)
Cone18ag0631 433 Pfam Transferase family 3 429 - -
Cone18ag0631 433 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0944 Cone-Chr11:7705382 Cone18ag0631 Cone-Chr18:3256509 3.64E-289 dispersed
Cone18ag0631 Cone-Chr18:3256509 Cone2ag0030 Cone-Chr2:175206 5.67E-82 dispersed
Cone18ag0631 Cone-Chr18:3256509 Cone18ag0620 Cone-Chr18:3179951 1.98E-293 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0631 K13065 - cit:102624577 702.205