Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone18ag0676 | ATGGCTCGTAGTAATGAAGTCCAGCTCAATGAATCCAGGAGCGTAGTTCCACTCAATACATGGGTCCTTATCTCAAACTTCAAGATTGCTTACAATCTCCTCCGGCGTGCCGACGGAACACTTAACCGTGAATTGTCCGAGTTTCTAGAACGCAAAGTCCCGGCCAATACAATCCCGGTCGATGGGGTCTTCTCATTTGACCATATCGACCGCTCCACTGGCCTCCTCAACCGAATTTATCAACCTGCCCTTGAAAACCACAACACTACTCAATGGAAACTTGAGCTAGAAAAACCTTTAAGCACAACAAAGATCGTCCCTGTCATAATATTCTTCCATGGAGGAAGCTTTGCTCATTCCTCAGCCAATACTGCTATCTACGACATATTTTGCCGCCGCCTTGTTAACACTTGCAAGGCAGTGGTAGTTTCTGTCAATTATAGGCGGTCTCCAGAACATAGATTTCCATGCGCATATGATGATGGATTTGAAGCTCTTCAATGGGTCAAATCTAGAACATGGCTAAGGAGTGGAAAGGACTTGAAAGTTCATGTGTACTTGGCTGGAGATAGTTCGGGCGGGAATATTGCCCATCATGTTGCGGTCAGGGCAGCCGAGGAGGATATTGAAGTACGGGGGAATATTCTTCTTCATCCTTTGTTTGGTGGGGAAGAGAGAACGGAATCTGAGTTGTTATTGGATGGGAAATACTTTGTTATGCTTAGAGACCGGGATTGGTATTGGAGAGCTTTTCTTCCGGAAGGAGAGGACAGAGACCATCCAGCTTGCAATATTTTCGGGCCGAGAAGTAAAAGCATTAGCAGGCTCAAGTTTCCGAAAAGTCTTGTTGTCGTAGCAGGCTTGGATCTTATCCAAGATTGGCAACTTACTTATGTTAAAGGCCTCGAGAAATCTGGCCATGAAGTGAAGCTTCTGTTTCTACGGCAGGCTACTATCGGGTTCTACTTCTTGCCGAACAATGAATACTTCTATTCATTAATGGAGGAGATAAACCAGTTTGTCAACTCTGCTTAG | 1035 | 45.12 | MARSNEVQLNESRSVVPLNTWVLISNFKIAYNLLRRADGTLNRELSEFLERKVPANTIPVDGVFSFDHIDRSTGLLNRIYQPALENHNTTQWKLELEKPLSTTKIVPVIIFFHGGSFAHSSANTAIYDIFCRRLVNTCKAVVVSVNYRRSPEHRFPCAYDDGFEALQWVKSRTWLRSGKDLKVHVYLAGDSSGGNIAHHVAVRAAEEDIEVRGNILLHPLFGGEERTESELLLDGKYFVMLRDRDWYWRAFLPEGEDRDHPACNIFGPRSKSISRLKFPKSLVVVAGLDLIQDWQLTYVKGLEKSGHEVKLLFLRQATIGFYFLPNNEYFYSLMEEINQFVNSA | 344 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 3596874 | 3599192 | - | Conep18aG0069500.1 | Cone18ag0676 | 457637 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone18ag0676 | 344 | Gene3D | alpha/beta hydrolase | 1 | 343 | IPR029058 | - | |
| Cone18ag0676 | 344 | FunFam | Gibberellin receptor GID1 | 1 | 343 | - | - | |
| Cone18ag0676 | 344 | ProSitePatterns | Lipolytic enzymes "G-D-X-G" family, putative serine active site. | 185 | 197 | IPR033140 | - | |
| Cone18ag0676 | 344 | SUPERFAMILY | alpha/beta-Hydrolases | 93 | 342 | IPR029058 | - | |
| Cone18ag0676 | 344 | ProSitePatterns | Lipolytic enzymes "G-D-X-G" family, putative histidine active site. | 109 | 125 | IPR002168 | GO:0016787(InterPro) | |
| Cone18ag0676 | 344 | Pfam | alpha/beta hydrolase fold | 109 | 322 | IPR013094 | GO:0016787(InterPro) | |
| Cone18ag0676 | 344 | PANTHER | ARYLACETAMIDE DEACETYLASE | 37 | 334 | IPR050466 | GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone18ag0676 | Cone-Chr18:3596874 | Cone1ag1766 | Cone-Chr1:58324334 | 6.08E-179 | dispersed | |
| Cone11ag0881 | Cone-Chr11:7276256 | Cone18ag0676 | Cone-Chr18:3596874 | 5.42E-249 | wgd | |
| Cone17ag0468 | Cone-Chr17:2236510 | Cone18ag0676 | Cone-Chr18:3596874 | 3.58E-208 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone18ag0676 | K14493 | - | rcu:8285826 | 578.556 |