Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0700 ATGTCTGGAAATATGACGGAAACCATCGTAGAAGAAAGAAAAGAGGTAGTTACTAAAAGAGAACAACTTAACGGGAAGAAACTCTCCTTTCATAAACTACGCCGTTACGACTCCTTAGACATCGAATCCCGCAGCTTCTCAAGCCGCCATGGCCATTCCTCCAAGGGAACGGAGTGGGCGGTGATACTGAATCTGGCGTTTCAAAGCATCGGAATAGTGTACGGAGACATCGGAACGTCGCCGCTCTATGTGTTCGGAAGCACGTTTCCAAACGGAATTAAGAATGAAGATGACATACTTGGCGTTCTCTCTTTGATCTTCTACACTCTAACCTTAATCCCTCTCCTTAAGTACGTCTTCATCGTTTTACGCGCCAACGATAATGGAGATGGTGGAACGTTTGCTCTCTACTCATTGTTATGCCGGTACGCCAAGATCGGTCTGATTCCGAGTCAGCAAGCGGAAGACCGGAATGTGTCAAATTATCGGCTCGGGTTGCCAAGCAATGGTAGGGATAGGAGGGCATCAAAGCTTAAAACAAAGCTAGAGAGTAGTAGGTTCGCCAAGTTTTTCCTCTTGTTTGCCACAATGCTCGGCACTTCCATGGTCATTGGAGATGGTGTCCTTACTCCTTGCATTTCGGTTTTGTCGGCTGTTGGAGGGATCAAGCAAGCCACCTCCGCAATCACTCAAGATATGATTGTATGGATATCAGCAGGTATATTGGTGTTTCTGTTCGTGATTCAGAGATTCGGAACAGACAAAGTGGGTTATAGTTTCGCTCCCATAATCTGTATATGGTTCGCTTTCCTTGGTGGCATTGGCATCTACAATTTCCTCAAGTACGATCCTGCCGTTATCAAGGCTCTTAATCCAAAATACATCGTAGATTATTTCAAAAGAAACAAAAAGGAAGCTTGGATTTCACTTGGCGGCATCGTACTAGCCATAACTGGAACTGAAGCTCTATTTGCCGATGTAGGGCACTTCACGGTGCGGTCTATACAAATAAGCATGTGTTGTGTAACCTATCCGGCCCTCTTATGTGCATATACCGGACAAGCTTCCTTCCTCCGTAAGCACAGCCATATCGATGTCGCAAACACCTTCTTCGAGTCAATCCCGAATGCTTTGTATTGGCCAGTGTTTGCGGTGGCTGTATTGGCAGCAATCATAGCAAGCCAAGCCATGATTTCTGGGACATTTTCGATAATCCAACAATCCGTTTCGCTCGGGTGTTTCCCTCGCGTAAAGATCGTCCACACTTCTACCGAATATGAGGGTCAAGTTTACATTCCTGAAGTCAATTACCTTCTCTTATTGGCTTGTTTAGGTGTTACTCTGGGTTTTAGAGAGACCGGAAAAATCGGCAATGCCTATGGGATAGCAGTTGTTTTCGTGATGACACTCACATCTTCATTCCTAGTACTAATCATGATCATGATATGGAAAACACACATCCTTCTCATAATCTCGTACATACTTGTCATTGGTTCCGTGGAATTACTCTACCTAAGTGCAGTCCTCTACAAATTCGATCAAGGAGGATATCTCCCTCTCGCATTTGCTACTGCTCTAATGATCATAATGTACGTTTGGAATGACGTTTACAGACGAAAATACTACTACGAACTCGAAAAGAAAATCTCACCCGAAAAACTCAAAGAGATTTCCGCAAACCAAACTATTTCCAGAATTCCTGGCCTCGCCATGTTTTACTCGGAGCTTGTTCAGGGAATCCCGCCTATCTTCAAGCATTACGTGGCTAATGTGCCCGCTTTGCATTCGGTTCTAGTCTTCGTATCTATAAAGTCATTGCCAATAAGTAAAGTTCCGGCCGAAGAGCGGTTTTTGTTTCGGAGAGTGAACCCCAAAGAGCTTTACGTGTTCCGTTGTGTAGTGAGATACGGATATACGGATGTGAGGAACGAGCGGGACCAAGAACAACCATTTGAGAGAATATTGGTTGAGAGATTGAAGGAGTTTATTCGAGACGAGTTTTGGTCATCAAAAGCGATGTTGCAAAAGATTAAGGAGGAGGGGGAGGAGGAGGAGGAGGAAGGAGTAGTGAAAGAAGATTGTGATGATGTAGCGGAGGAGGGCGCCGCAGAGAAAGAAGCGGCCGAGGAGGAGGGATTGGAGAGAGATATTGAGGAGGTGGATAAAGCATGGGGGGATGGGGTGGTACATTTCATCGGGGAGAATGAGATTGTGGCGGGAAAAGGAGCTGGAATTGGGAAGAGGGTTTTGATTGATTATGTGTATAGTTTCTTGAAGAGGAATTTGAGGCAGAGTGAGAAGGTTTTTGATATTCCTCACCAAAGAATGTTGAAAGTGGGTATGACTTATGAGCTTTAA 2358 44.87 MSGNMTETIVEERKEVVTKREQLNGKKLSFHKLRRYDSLDIESRSFSSRHGHSSKGTEWAVILNLAFQSIGIVYGDIGTSPLYVFGSTFPNGIKNEDDILGVLSLIFYTLTLIPLLKYVFIVLRANDNGDGGTFALYSLLCRYAKIGLIPSQQAEDRNVSNYRLGLPSNGRDRRASKLKTKLESSRFAKFFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKQATSAITQDMIVWISAGILVFLFVIQRFGTDKVGYSFAPIICIWFAFLGGIGIYNFLKYDPAVIKALNPKYIVDYFKRNKKEAWISLGGIVLAITGTEALFADVGHFTVRSIQISMCCVTYPALLCAYTGQASFLRKHSHIDVANTFFESIPNALYWPVFAVAVLAAIIASQAMISGTFSIIQQSVSLGCFPRVKIVHTSTEYEGQVYIPEVNYLLLLACLGVTLGFRETGKIGNAYGIAVVFVMTLTSSFLVLIMIMIWKTHILLIISYILVIGSVELLYLSAVLYKFDQGGYLPLAFATALMIIMYVWNDVYRRKYYYELEKKISPEKLKEISANQTISRIPGLAMFYSELVQGIPPIFKHYVANVPALHSVLVFVSIKSLPISKVPAEERFLFRRVNPKELYVFRCVVRYGYTDVRNERDQEQPFERILVERLKEFIRDEFWSSKAMLQKIKEEGEEEEEEGVVKEDCDDVAEEGAAEKEAAEEEGLERDIEEVDKAWGDGVVHFIGENEIVAGKGAGIGKRVLIDYVYSFLKRNLRQSEKVFDIPHQRMLKVGMTYEL 785
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3760446 3765551 - Conep18aG0072000.1 Cone18ag0700 457661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0700 785 Pfam K+ potassium transporter integral membrane domain 65 553 IPR053951 -
Cone18ag0700 785 MobiDBLite consensus disorder prediction 679 715 - -
Cone18ag0700 785 Pfam K+ potassium transporter C-terminal domain 567 785 IPR053952 -
Cone18ag0700 785 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 48 784 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cone18ag0700 785 MobiDBLite consensus disorder prediction 680 715 - -
Cone18ag0700 785 NCBIfam potassium uptake protein 65 784 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone18ag0700 785 Coils Coil 703 723 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0903 Cone-Chr15:7046042 Cone18ag0700 Cone-Chr18:3760446 6.54E-274 dispersed
Cone17ag0501 Cone-Chr17:2483019 Cone18ag0700 Cone-Chr18:3760446 0.00E+00 dispersed
Cone18ag0700 Cone-Chr18:3760446 Cone19ag1021 Cone-Chr19:7628271 1.48E-221 dispersed
Cone11ag0857 Cone-Chr11:7105738 Cone18ag0700 Cone-Chr18:3760446 0 wgd
Cone17ag0500 Cone-Chr17:2478399 Cone18ag0700 Cone-Chr18:3760446 9.27E-71 wgd
Cone18ag0700 Cone-Chr18:3760446 Cone20ag0928 Cone-Chr20:6678096 2.68E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0700 K03549 - mdm:103449255 1132.86