Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0721 ATGGGCAGCGATAGTTGTGAAAGCTACTTGATTTTTAATGGTGAAACATCACTTGGGAGTGGGTTTCGGACCTTCTTGTACACTCTTGGTCTGGCTTACTGCTTCATAGGGCTATCGGCCATCACTTCTCGCTTTTTCCGATCCATGGAAACTATTGTAAAGCACTCCAGGAAGGTGGTGGAGATTGATCCTTACACTAATACTGAGACTATCCGATATGAAAAGGTGTGGAATTTCACCATTGCTGATATCAGCCTGCTGGCATTTGGCACAAGCTTCCCTCAAATATCATTAGCTACTATTGATGCTATCCGAAACATTGGGAACCTGTATGCTGGAGGTTTGGGTCCTGGAACTCTTGTTGGCTCTGCTGCATTCGACCTTTTTCCCATCCACGCCATTTGCATTATAGTGCCAAAAGCTGGAGAGTTGAAAAAGATAGCTGATATAGGAGTATGGCTAGTGGAGCTATTTTGGTCTTTCTGGGCTTATGTTTGGCTATATATTATTTTAGAGGTATGGACTCCGAATGTGATTACTCTCTGGGAAGCTTTATTGACCGTCTTGCAATATGGATTACTATTGATACATGCTTATGCTCAAGACAAGCGTTGGCCCTACTTGTCTCTTCCTCTGGGAAAAAGTGAGAGGCCAGAGGATTGGGTTCCGGAAGAGACTGCTACATGTAAACATGAATGCAGTGTGGATGATGAAGTACTTCCACTTAGAAGGGATGGAATTGGGAGCCTTGTTGATATCTTTTCTGTCCATTCAGAACATGGATCAGGTCCAGTGTATCAAAAATTGTCTGGAATTGATGATGTCCCCGAATCGTCTCAAAATGATGCTCAAAAGCAGATCATATCAGAAGATATCGTGCTTACAATTTGGAAACAGCAATTTGTGGATGCTCTTACGTTGGAAAGCACAAAATCACAAAAGGGGAACAGCATCTATCTACAAATTGCAAGATTTTTCTGGCATTTCCTTTGTGTTCCTTGGAAACTTTTGTTTGCTTCTGTGCCTCCATATCATATTGCCCATGGATGGCTTGCTTTTTGTTGTTGTCTGACTTTCATCAGCGGAACAGCTTATATTGTAACACAACTTACAGATCTTATAAGCTGTGTCACAGGAATAAATCCTTATATCATAGCATTTACAGCATTAGCTAGTGGCACATCCTGGCCTGACTTAGTGGCTAGTAAGATTGCTGCTGAGCGTCAGACAACAGCAGATTCAGCCATTGCAAACATTACTTGCAGCAATTCTGTGAACATATATGTGGGCATAGGGATTCCTTGGCTGATTGACACTGCATACAATCACATTGTGCTTAAAGAACCCTTGAGGATCAAGGATGCATCGGGTCTCAGTTTCGCTTTGCTCATTTTCTTTTCGACTTCTGTATGTTGTATCGCTGTTCTTGTGTTTAGGCGTTTAACGTTAGGCGCGGAGCTAGGAGGGCCCAGGCTATGGGCTTGGATTACTTGTGTCTATTTCATCTTGCTTTGGATTATTTTTGTTGTGTTAGCTTCCCTTGGGGTTTGTGGCATCATTTGA 1563 42.48 MGSDSCESYLIFNGETSLGSGFRTFLYTLGLAYCFIGLSAITSRFFRSMETIVKHSRKVVEIDPYTNTETIRYEKVWNFTIADISLLAFGTSFPQISLATIDAIRNIGNLYAGGLGPGTLVGSAAFDLFPIHAICIIVPKAGELKKIADIGVWLVELFWSFWAYVWLYIILEVWTPNVITLWEALLTVLQYGLLLIHAYAQDKRWPYLSLPLGKSERPEDWVPEETATCKHECSVDDEVLPLRRDGIGSLVDIFSVHSEHGSGPVYQKLSGIDDVPESSQNDAQKQIISEDIVLTIWKQQFVDALTLESTKSQKGNSIYLQIARFFWHFLCVPWKLLFASVPPYHIAHGWLAFCCCLTFISGTAYIVTQLTDLISCVTGINPYIIAFTALASGTSWPDLVASKIAAERQTTADSAIANITCSNSVNIYVGIGIPWLIDTAYNHIVLKEPLRIKDASGLSFALLIFFSTSVCCIAVLVFRRLTLGAELGGPRLWAWITCVYFILLWIIFVVLASLGVCGII 520
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3860633 3865025 + Conep18aG0074300.1 Cone18ag0721 457682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0721 520 Gene3D - 80 217 IPR044880 -
Cone18ag0721 520 Gene3D - 304 515 IPR044880 -
Cone18ag0721 520 PANTHER SODIUM/CALCIUM EXCHANGER 5 205 IPR051171 GO:0015491(PANTHER)|GO:0016020(PANTHER)|GO:0030001(PANTHER)
Cone18ag0721 520 Pfam Sodium/calcium exchanger protein 27 199 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cone18ag0721 520 Pfam Sodium/calcium exchanger protein 349 512 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0721 K03452 - mdm:103432597 827.009