Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0752 ATGGCGTCGGTGATGTCGGCGCTCGCAGCTTCTGGCACCTCCGGGGTGTTGAGAAACATCAACTGGTTCCTCCTGAAGCGAATATTTGCATTGTGTTATGTGATCTCCATCACCCATGCTACCGTACCATTTGATTTTCCAATATCCCCAGCATTATCTCCTAGTCATGTGACTTTGATTTCACCTGCTATTCCTGATCTTCCGCTTCCCGCCAATTTACCACATTCTAATAAACATCGGTGGAAGAATTTCTCACCCCATTATTTACCAAAAGCTGAGATAGCACTTGCAATTCCTCCCAATTACGGCCCTCTTGTAACTTCTGGTCATCCTCCAACAAGTTCACGAATGTCAAGACCATTGATGAAGAGGAGTGGATCAGCACCTCCAATTTCTGGCTTTGAAAACATTGCCCCACGGCATTCAAGTGCTGGCACAATTTCTTCTGGTTTACCTCAGCTGCCATTGTCTCCTTATGCTTCCAACTGTTGCCAACCAGACACGGTGCTGAAACGAGGAAGTCAGAGTTGCCACTGTGTGTATCCCATAAGGCTTGACCTTCTTCTCTTTAACATCTCACGAAATCCTAGTTGGAATCTTTTCCTGGAAGAATTAGCGTCGCAGCTTCATTTGCGGGTTTCTCAGATTGAGCTGATTGACTTTTACATACTCAGCTTGTCAAGGTTAAATATCTCGATGGATATTACTCCGCATACCGGGCTGAGTTTCTCTTCTAGTGATGCATCTGCAATAAACTCTTCACTGTCAAAGCATAAGGTTCATGTGGACCCTATTTTAGTGGGGGATTACAAGCTTCTTAATATAACCTGGTTTAGGCCTCCAGCTCCTCAAGCTCCTCTTGTCGCTACATCTCCCGTGGTGGCCCCAACACACCAATCATCAGCTTCTGCAGCACGTAATGCTGCAAATAATGGGAGACACTCAAATTTGTCTCTCATTCTTGGTGTCATTGCTGGTCTTCTGTTCATTGCCACTCTAGTTGTGCTTACTGCCTGTTTATGCATATATAACCATGGGAAGGCGAAAGAATCTGCTGAAGTAGCAGATAAACAGAGAGCTGTAGAGACAGTTCAACCAGTAGGATCACTTTCCCACCGAACCAGTACTAGGTTTCTAGCTTATGACGAACTTAAAGAAGCAACAAATAATTTTGAACCTGCTAGCATATTAGGAGAGGGTGGCTTTGGAAGAGTTTTCAAGGGCATCTTAAGTGATGGGACACTTGTTGCCATCAAGAGGCTATCAAGTGGAGGACAACAAGGGGATAAAGAGTTTCTGGTTGAGATTGAAATGCTTAGCAGATTACATCACCGTAATCTTGTCAAGCTTGTGGGCTATTATAGCAGTCGAGATTCTTCACAACACTTGCTATGCTACGAGCTTGTCCCAAATGGCTGCCTGGAGGCCTGGCTCCATGGTTCTCTAGGAGTAAATTGTCCTTTGGATTGGGACACCAGAATGAAGATCGCACTTGATGCAGCCAGAGGACTTGCATACCTACACGAGGACTCACAACCTTGTGTTATCCACAGAGATTTCAAGGCATCCAATATACTGCTCGAGAATAATTTCCATGCGAAAGTTGCAGATTTCGGCCTTGCTAAACAGGCTCCTGAGGGAAGAACAAACTATCTGTCTACCCGTGTGATGGGCACATTTGGCTATGTAGCTCCTGAGTATGCAATGACTGGTCATCTACTTGTTAAGAGTGATGTTTATAGTTATGGAGTTGTTCTGCTGGAATTGCTCACTGGTAGGAAGCCTGTGGATATGTCTCAACCATCCGGACAGGAAAACCTGGTCACTTGGGCTCGACCGATTCTAAGAGACAAGGATAGGCTGGAAACCTTAGTGGATGCTAAGCTTGGAGGGAAGTATCCAAAGGAAGATTTTGTTCGGGTTTGTACAATTGCTGCTGCCTGTGTTGCTCCTGAGGCAAGCCAAAGGCCCACAATGGGTGAAGTGGTTCAATCACTTAAAATGGTGCAGAGAAGTACGGAATATCCCGATTCGGTTTTGCAATCATCAAGTAACAGCAAACTGCAGAATCTTCGGCAGTCTTCAACTACTTTCGAGTCAGATGGGACATCTTCTATTTTCTCTTCCGGACGTTATTCTGGTCTAATCTCCTTTGATCATGATAATGTCACTAAGACAGCTGTTTTCTCCGAAGATCTTCCCGAAGGACGATGA 2214 45.03 MASVMSALAASGTSGVLRNINWFLLKRIFALCYVISITHATVPFDFPISPALSPSHVTLISPAIPDLPLPANLPHSNKHRWKNFSPHYLPKAEIALAIPPNYGPLVTSGHPPTSSRMSRPLMKRSGSAPPISGFENIAPRHSSAGTISSGLPQLPLSPYASNCCQPDTVLKRGSQSCHCVYPIRLDLLLFNISRNPSWNLFLEELASQLHLRVSQIELIDFYILSLSRLNISMDITPHTGLSFSSSDASAINSSLSKHKVHVDPILVGDYKLLNITWFRPPAPQAPLVATSPVVAPTHQSSASAARNAANNGRHSNLSLILGVIAGLLFIATLVVLTACLCIYNHGKAKESAEVADKQRAVETVQPVGSLSHRTSTRFLAYDELKEATNNFEPASILGEGGFGRVFKGILSDGTLVAIKRLSSGGQQGDKEFLVEIEMLSRLHHRNLVKLVGYYSSRDSSQHLLCYELVPNGCLEAWLHGSLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLETLVDAKLGGKYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRSTEYPDSVLQSSSNSKLQNLRQSSTTFESDGTSSIFSSGRYSGLISFDHDNVTKTAVFSEDLPEGR 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4146543 4150885 - Conep18aG0077600.1 Cone18ag0752 457713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0752 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone18ag0752 737 FunFam Receptor-like serine/threonine-protein kinase ALE2 469 687 - -
Cone18ag0752 737 ProSitePatterns Protein kinases ATP-binding region signature. 397 419 IPR017441 GO:0005524(InterPro)
Cone18ag0752 737 PANTHER OS01G0750732 PROTEIN 162 705 IPR050885 -
Cone18ag0752 737 SUPERFAMILY Protein kinase-like (PK-like) 368 668 IPR011009 -
Cone18ag0752 737 FunFam Receptor-like serine/threonine-protein kinase ALE2 371 468 - -
Cone18ag0752 737 Gene3D Phosphorylase Kinase; domain 1 349 468 - -
Cone18ag0752 737 ProSiteProfiles Protein kinase domain profile. 391 669 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0752 737 Gene3D Transferase(Phosphotransferase) domain 1 469 692 - -
Cone18ag0752 737 Pfam Protein tyrosine and serine/threonine kinase 395 666 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone18ag0752 737 MobiDBLite consensus disorder prediction 677 704 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0752 Cone-Chr18:4146543 Cone18ag0817 Cone-Chr18:5195317 1.46E-116 dispersed
Cone11ag0700 Cone-Chr11:4775332 Cone18ag0752 Cone-Chr18:4146543 0 wgd
Cone11ag0816 Cone-Chr11:6690935 Cone18ag0752 Cone-Chr18:4146543 2.51E-116 wgd
Cone17ag0409 Cone-Chr17:1940575 Cone18ag0752 Cone-Chr18:4146543 0 wgd
Cone18ag0752 Cone-Chr18:4146543 Cone20ag1003 Cone-Chr20:7052299 1.08e-316 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82322 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0752 - - - 0.0