Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0762 ATGGAAGAGTCGTTTGTACCTTTTCGTGGAATCAAGAATGATCTCAAAGGTAGATTATTGTGCTACAAGCAAGATTGGACCAGTGGCCTCCAAGCCGGCTTCCGGATCTTGGCTCCGACTACATATATATTTTTCGCTTCTGCGATTCCGGTGATATCATTTGGTGAACAATTGGAGCGAAATACAGATGGAGTTTTGACGGCAGTTCAAACATTAGCATCTACGGCATTTTGTGGAATCATACACTCAATAATAGGAGGTCAACCTTTGCTAATCTTAGGAGTTGCAGAACCCACCGTTATTATGTACACATTCATGTTCAATTTTGCTAAAGAGCGAGCCCAATTAGGCCGGAATCTATTTCTAGCTTGGACTGGATGGGTATGTGTTTGGACTTCATTCCTGTTGTTCTTAATGGCTATCTTAGGAGCCTGCTCCATCATCAATAGGTTCACACGTGTGGCGGGAGAATTGTTTGGTTTGCTTATCGCCATGCTTTTCATGCAACAAGCTATCAAAGGAGTTGTTGATGAATTTCGCATACCTCAAAGAGAGAACACAACATTAATACAATTCATACCATCTTGGAGATTTGCAAATGGCATGTTTGCTTTGGTTCTATCTTTTGGTCTTTTGCTTACAGCTTTAAAGAGTAGGAAAGCAAGGTCGTGGCGATATGGATCTGGTTGGCTAAGAAGCTTCGTAGCGGACTATGGGGTGCCTCTTATGGTTCTAGTATGGACAGCTGTTTCCTACATACCATCATCAAGCGTTCCGAATGGGATCCCACGCCGCCTTTTTAGCCCTAATCCATGGTCTCCTGGTGCTTATGAGAATTGGACCGTCGTTAAGGACATGACGAATGTTCCAATTCTATATATCATAGGAGCCTTCATTCCTGCAACAATGATTGCGGTGCTTTACTATTTTGACCATAGTGTGGCATCTCAACTTTCTCAACAAAAGGAGTTCAATTTGAGGAAGCCATCTTCTTACCATTACGACTTGCTTCTCTTGGGATTTTTGACCTTAATATGTGGGCTTATTGGAATCCCTCCTTCTAATGGAGTCATCCCACAATCTCCGATGCATACCAAGTGCCTTGCAACTCTCAAGCACCAGTTGCTCCGGAATAAACTTGTAATGGCGGCACGAAAAAGTATTAGAAAGAATGCAAGCTTGGGGCAAGTATATAGAAATATGCAAGAAGCTTATCACCAAATGCAAACCCCTTTGATATTCCAACAGCCCTCAGCTCCAGGGCTAAAGGAACTGAAAGAATCAACAATAGAGGCAGCTTCAAGAATGGGGAACATAAATGCGCCGGTTGATGAGACAGTGTTTGATGTAGAGAAAGAAATAGACGATCTGTTACCAGTGGAGGTGAAGGAACAAAGGGTTAGTAACTTGCTCCAAGCAACAATGGTGGGAGGATGTTTAGCAGCCATGCCTTTTCTCAAGAAGATCCCAACTTCTGTTCTCTGGGGCTACTTTGCCTACATGGCTATTGAAAGTTTGCCTGGTAATCAGTTTTGGGAAAGGATTCTGTTGCTTTTCACTGCCCCAAGCAGGAGATACAAAGTGCTTGAAGATTACCATGCGACATTTGTGGAAACAGTGCCATTCAAGATAATTGCAACATTCACCCTTTTCCAAACAACATATTTGCTAATATGTTTTGGGCTCACTTGGGTTCCAATTGCCGGGGTCATGTTTCCTCTAATGATCATGCTTTTAGTTCCAGTTAGACAATACCTCATGCCCAAGTTTTTTAAAGGGGCACATCTCCAAGACTTGGATGCTGCTGAATATGAAGAGGCACCGGCCTTACCATTCAATCTTGCAACGGAGGCTGAATTGGGAGCTACAGCCTCGTTTGGAGGGGATGGAGAAATACTAGATGAAGTTATAACAAGAAGTAGAGGGGAGTTTAGACATGTTAATAGTCCTAAAGTCACAAGCTCAACAGCAACAACAACATCATATGACCATCGCCACAAAAGCTTTGAGAGCCCTCATTCTTCTACATATAGTCCTCGTATGAGTGAGCTAAGAGGAGAACAAAGTCCTAGAAGTCCTGGAGATTCGATCAAGCCTAGTTTGGGTAAGAGTCCTCTTAATTCGGCATAA 2130 42.91 MEESFVPFRGIKNDLKGRLLCYKQDWTSGLQAGFRILAPTTYIFFASAIPVISFGEQLERNTDGVLTAVQTLASTAFCGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERAQLGRNLFLAWTGWVCVWTSFLLFLMAILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGVVDEFRIPQRENTTLIQFIPSWRFANGMFALVLSFGLLLTALKSRKARSWRYGSGWLRSFVADYGVPLMVLVWTAVSYIPSSSVPNGIPRRLFSPNPWSPGAYENWTVVKDMTNVPILYIIGAFIPATMIAVLYYFDHSVASQLSQQKEFNLRKPSSYHYDLLLLGFLTLICGLIGIPPSNGVIPQSPMHTKCLATLKHQLLRNKLVMAARKSIRKNASLGQVYRNMQEAYHQMQTPLIFQQPSAPGLKELKESTIEAASRMGNINAPVDETVFDVEKEIDDLLPVEVKEQRVSNLLQATMVGGCLAAMPFLKKIPTSVLWGYFAYMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKIIATFTLFQTTYLLICFGLTWVPIAGVMFPLMIMLLVPVRQYLMPKFFKGAHLQDLDAAEYEEAPALPFNLATEAELGATASFGGDGEILDEVITRSRGEFRHVNSPKVTSSTATTTSYDHRHKSFESPHSSTYSPRMSELRGEQSPRSPGDSIKPSLGKSPLNSA 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4291387 4296309 + Conep18aG0078600.1 Cone18ag0762 457723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0762 709 Pfam HCO3- transporter integral membrane domain 460 602 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone18ag0762 709 Pfam HCO3- transporter integral membrane domain 199 372 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone18ag0762 709 Pfam HCO3- transporter integral membrane domain 7 180 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cone18ag0762 709 MobiDBLite consensus disorder prediction 647 662 - -
Cone18ag0762 709 Gene3D Helical hairpin bin 18 60 - -
Cone18ag0762 709 FunFam probable boron transporter 2 18 60 - -
Cone18ag0762 709 MobiDBLite consensus disorder prediction 647 709 - -
Cone18ag0762 709 PANTHER ANION EXCHANGE PROTEIN 4 639 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0046715(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0701 Cone-Chr15:3815406 Cone18ag0762 Cone-Chr18:4291387 0 dispersed
Cone16ag0099 Cone-Chr16:553672 Cone18ag0762 Cone-Chr18:4291387 1.39e-315 dispersed
Cone17ag1040 Cone-Chr17:7855980 Cone18ag0762 Cone-Chr18:4291387 9.44E-269 dispersed
Cone18ag0762 Cone-Chr18:4291387 Cone2ag0909 Cone-Chr2:34900850 0 dispersed
Cone14ag0688 Cone-Chr14:3566315 Cone18ag0762 Cone-Chr18:4291387 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0762 K24194 - csv:101205388 1215.68