Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone18ag0774 | ATGTTGAAGTTCACAGCTGAGGAGTTGCGTAGGATCATGGACTTCAAACACAACATCCGTAACATGTCTGTTATTGCTCATGTTGACCACGACTCCATGTTCTTTACGAGATGCTTTGCTCGAGTGTACCCTCTTCTTACGAGAAAGTTCCGTTTCTTCTCAAATGCTTCAAGGAAAATCATAGATTTAGAAAATGAAGTGTTTTCTTACTCAGTATCTCATATAAATTCTTCCACTACACTTAAGCCATCGCCTATTTTCAGTGATGATAGACTTCATATAGGTGGTTATAATATCCAGCTTGTGGACCATGATACTTGGTGTGTCTCATCCACTTTAGCACAAGTATGGGGAAAATCAGAGCAGGATAGGGCTGAATCTAATTCAAAAACAAGGATTTTATCCGAGGAAGACATTCATGACCCATTTAATTATGGGTCTGCTACTAATATAGATGACGGCCCTGATTTCGATGACATTGATAGTATGAGGATCCGAGGAAATTTGTTCTATAAACTTGACCGGAATTCGAAGGAGTATGAAGAGTACAGTTTTGACTTCCACAGAAAGAAAAAGTCTTCAAAGAAAAAAGAAGATGACAACACAAAGCAAAAGGAGGACAACCGGATGATGAACTCAACATTAGCAAGTGAAAAAGTTCCTCAAATCTCAAAGGAAAAATTTATTATCATAGAAAAGGATACTATTAGTAGTGCTTGTCTTGATAACAAGAGGCAAGAAAGAGTTCCAACTTTTAACCAGCTTACAGCTCCTTACCATGAACCCTTTTGCCTTGACATTTTCATATCAAAAGGCTCTGTTCGAGCTTGTGTCATTCATAGGTTGACCAGTAAGGTCGTTGCCGTTGCTCATTCGATTTCTAAAGATATGAAATTTGACCTTAATTCAAGGAGGGATTCAACTGCTTGTGCTGCTGTAGGGGAAGTTTTGGCTCAGAGAGCATTAGCAGATGATATTCATGATGTGGTTTATACACCAAGGAAAGGAGATAGAATGGAAGGGAAGCTTCAAATAGTACTAGACTCTATCATTAATCATGGGATTAATGTGAAAGTGAAGCTTAAGCAGAGAAGACCTATGAAAGCTCGGTCTATATGTGTAAGGGATATGTTTTACAAGATTTATTTTATAATCCAATGGTCCACTCATACCGATTCTCTTGTTGCTGCTGCTGGTATCATTGCACGAGAGGTTGCCGGTGATGTGCGTATGACAGATACCCGAGCAGGTGAGGCAGAATGTGGTATTACTATTAAGTCTACTGCTATCTCTCTCTACTATGAGATGACTGATGAGTCATTGAAGAGCTACAAGGGTGAGAGAAATGGAAAAGAGTACCTCATCAATCTCATTGACGCACTCGGACATGTTGACTTCTCCTCTGAGGTGATGTGCAACTTCCTTGAGCTTCAAGTGGATGGGCAGGAAGCCTACCAAACATTCCAGATGGTTATTAAGAATGCTAATGTGATCATGGCAACATGTGAAGATCTCCTTCTTGGTGATGTGCAAGTCTACCCCGAGAAAGTGACTCTTGCTTTCCCTGCAGGTCTGCATTGTTGGGCCTTTACCCTGACAAACTTTTGCTAA | 1611 | 40.16 | MLKFTAEELRRIMDFKHNIRNMSVIAHVDHDSMFFTRCFARVYPLLTRKFRFFSNASRKIIDLENEVFSYSVSHINSSTTLKPSPIFSDDRLHIGGYNIQLVDHDTWCVSSTLAQVWGKSEQDRAESNSKTRILSEEDIHDPFNYGSATNIDDGPDFDDIDSMRIRGNLFYKLDRNSKEYEEYSFDFHRKKKSSKKKEDDNTKQKEDNRMMNSTLASEKVPQISKEKFIIIEKDTISSACLDNKRQERVPTFNQLTAPYHEPFCLDIFISKGSVRACVIHRLTSKVVAVAHSISKDMKFDLNSRRDSTACAAVGEVLAQRALADDIHDVVYTPRKGDRMEGKLQIVLDSIINHGINVKVKLKQRRPMKARSICVRDMFYKIYFIIQWSTHTDSLVAAAGIIAREVAGDVRMTDTRAGEAECGITIKSTAISLYYEMTDESLKSYKGERNGKEYLINLIDALGHVDFSSEVMCNFLELQVDGQEAYQTFQMVIKNANVIMATCEDLLLGDVQVYPEKVTLAFPAGLHCWAFTLTNFC | 536 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 4400631 | 4403644 | + | Conep18aG0079900.1 | Cone18ag0774 | 457735 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone18ag0774 | 536 | Gene3D | - | 242 | 356 | - | - | |
Cone18ag0774 | 536 | PANTHER | 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL | 159 | 358 | IPR005484 | GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro)|GO:0008097(PANTHER) | |
Cone18ag0774 | 536 | Pfam | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast | 264 | 356 | IPR005484 | GO:0003735(InterPro)|GO:0005840(InterPro)|GO:0006412(InterPro) | |
Cone18ag0774 | 536 | Gene3D | - | 387 | 473 | IPR027417 | - | |
Cone18ag0774 | 536 | MobiDBLite | consensus disorder prediction | 191 | 211 | - | - | |
Cone18ag0774 | 536 | Pfam | Elongation factor Tu GTP binding domain | 388 | 471 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cone18ag0774 | 536 | MobiDBLite | consensus disorder prediction | 191 | 207 | - | - | |
Cone18ag0774 | 536 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 388 | 535 | IPR027417 | - | |
Cone18ag0774 | 536 | CDD | Ribosomal_L18_L5e | 259 | 355 | - | - | |
Cone18ag0774 | 536 | SUPERFAMILY | Translational machinery components | 244 | 355 | - | - | |
Cone18ag0774 | 536 | Gene3D | - | 474 | 536 | IPR027417 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag0774 | Cone-Chr18:4400631 | Cone3ag1479 | Cone-Chr3:33478279 | 1.02E-64 | dispersed | |
Cone18ag0774 | Cone-Chr18:4400631 | Cone7ag0437 | Cone-Chr7:1953297 | 1.37E-23 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone18ag0774 | K02881 | - | csv:101213193 | 325.479 |