Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0776 ATGGTTGGGTTGGATCAATATATCACCAAGAATGCTACTTTGACAAATGAAAAGGAAGTTGATGCTCACCCGATCAGAGCCATGAAATTCTCTGTCTCACCTGTTGTTCGTGTTACAGTTCAGTGCAAGGTGGCTTCTGATCTTCCCAAACTAGTGGAATGTCTCAAGCGATTGGCCAAGTCGGATCCTATGGATCTGCAAGAGGACTTCATGGATGGTGCTGAGATCATCAAATCTGATCCGGTCATGAGCAATTCGCTGAACAAGCACAACCGTCTCTACATGGAAGCTCGTCCCCTGGAGGAAGGGCTTGCCGAAGCCATTGATGATGGCAGTATCGGACCAAGAGACCACCCCAAAGTCTGTTCCAAGTTTCTTGGAGGAATTGTCTTGGGCAAGACTGAGAATTCTCCAAGACATTCTAGGATCTTTGTGTGA 438 46.8 MVGLDQYITKNATLTNEKEVDAHPIRAMKFSVSPVVRVTVQCKVASDLPKLVECLKRLAKSDPMDLQEDFMDGAEIIKSDPVMSNSLNKHNRLYMEARPLEEGLAEAIDDGSIGPRDHPKVCSKFLGGIVLGKTENSPRHSRIFV 145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4404214 4404726 + Conep18aG0080100.1 Cone18ag0776 457737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0776 145 Gene3D - 77 137 IPR014721 -
Cone18ag0776 145 SUPERFAMILY Ribosomal protein S5 domain 2-like 80 126 IPR020568 -
Cone18ag0776 145 Gene3D Elongation Factor G (Translational Gtpase), domain 3 32 69 - -
Cone18ag0776 145 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 64 - GO:0003746(PANTHER)|GO:0003924(PANTHER)|GO:0005829(PANTHER)|GO:0006414(PANTHER)|GO:0043022(PANTHER)|GO:1990904(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag0776 Cone-Chr18:4404214 Cone3ag1479 Cone-Chr3:33478279 6.23E-62 dispersed
Cone18ag0776 Cone-Chr18:4404214 Cone7ag0591 Cone-Chr7:2838868 1.63E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0776 K03234 - cit:102616295 202.216