Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0817 ATGAGAGTTTCACATGCTCTGTCAAAACCTCACAGTAGACGAGTATTTAAGCTTTCTCTAGAGCCATCTCCTGCTCCTGTACCTTCTCCACATTCTCAAGGGCGTAGCAGCTCACCATTAACTAATCATCATCGGCATCATCGTCATGTTAGATCTCATTTGGTTGCTCCAACCCCTTCTAAAGGCCAAGGATGTGATCAAATCTGTGTGGAGCCGCTTACTGCAACTCCCTTTGGTTCTCCTTGTGGATGTGTGTTTCCCATGAAAGTCCAACTTCTTTTGGACATAGCACCTTTTTCTGTTTTTCCTGTAATGAATGAGCTTGAGATTGAGATTGCAGAGGGTACGTATTTGACACAAAGTCAAGTAAAAATAATGGGTGCTAGTGCTGATACTCATAATCAAGGGAGAACAGTGGTGGATGTTAACCTGGTACCCCTTGGAGAGAAGTTTGATAACACCACTGCAGTCTTAACATCCGAGAGATTTTGGCATAAGAATGTGCCTCTTAATAGCACTCTTTTTGGTAGTTATGATGTGATGTATGTCAGATATCCAGGGCTGCCTTCTTCACCACCTTATGGGAGTTATATGGGGAAGGGTCCAAGTGGAAGTCCAGAAGATCTTCCTATCTCTGTGAATTTCATAAACAAGAGCAAGAGGATGAGTGTTAGAACCATTGCCATCATTGCTTTGTCTGCATTTGTATTATTATTGGTTTTCCTTGGTGCTCTGTTTGTTTATGTAAAATGGAGGAAGTTTAGAAGGCCGTCAAGTGCTGTTGGTCCTGCCTTTACATCATCTATAAATAAAAGATCCAGTACTGGGTCCGTCCTGTCAAGTAGCACGGCAAGCTCTACCTCAGTTTCCCTGATTTCCACCATGGCTACTTGTATTCCATCTGTCAAGACATTTTCCCGCCCTGCACTTGTGAAAGCCACAGACAAGTTTAGCTCAAAGAGGCTTCTAGGCGAAGGGGGATTTGGGCGTGTTTATCATGGCATTATAGAAGATGGAACTGAAGTTGCAGTTAAGTTGCTTACTAGGGAGAATAATCAGAATGGTGACCGTGAATTTATTGCAGAAGTTGAGATGCTTAGTCGGTTACATCACCGTAATCTCGTGAAATTGATCGGTATATGCATTGAAGGTCGCATGCGCTGCTTAGTCTATGAGCTTGTTCACAATGGCAGTGTTGAGTCCCATTTGCATGGTGTTGACATGAAAAAGGGACCTCTTGACTGGGATGCGCGGTTGAAAATTGCTCTTGGAGCAGCAAGAGGGTTGGCTTATCTTCATGAAGATTCTAACCCTCGAGTAATTCACCGGGATTTCAAGGCTAGTAATGTTTTATTGGAAGATGACTTCACCTCCAAGGTTTCAGATTTTGGACTGGCGAGGGAAGCAACTGAAGGAAGTCAACATATATCTACACGGGTTATGGGAACTTTTGGGTATGTAGCCCCTGAATATGCAATGACAGGACATCTACTTGTCAAAAGTGATGTTTACAGTTATGGCGTTGTTCTGCTCGAGCTTCTCTCTGGCAGAAAACCTGTGAACATGTCCCAACCTCAGGGACAGGAGAACCTAGTAACATGGGCACGAACCCTACTTACTAGTAGAGAAGGATTGGAGCAACTGATTGATCCTTCTTTGGCCGGAAGTTATGACTTTGATGACATGGCTAGGGTAGCAGCCATTGCTTCTATGTGTGTACACCCAGAAGTGACTCACAGGCCATTTATGGGAGAAGTTGTGCAGGCTCTTAAACTTATATATAATGACACAGACGAGACAAGTGGGGATTTTTGCAGCCAAAAGGAATCCTCTGCTCGAGACTCGGACTTCAAAGGAGATCATCTTGTACCATCAGATAGCAGTTGGTGGAATGTTGGTGGGCTAACACCTCGATTGACTTATGGGCTGGCCTCTTCCTTCATTACGATGGAGTACAGCTCTGGCCCGCTTGAAGAGATGGGAAATAGACCCCATTCAACTTCAAGTTTAGTAGGAGATGAGACATCTTTACCAATGAGGCATGGGAACAGATCTGGCCCCTTGAGAACAATTCGGAGCAAGCCTGCTTTGTATAGATTGTCAGGTAGTAGGAGTGATCATGGGGGACTTCTTTCGAGACAAATTTGGAATGATGGGTACTGGGTTTAA 2169 44.17 MRVSHALSKPHSRRVFKLSLEPSPAPVPSPHSQGRSSSPLTNHHRHHRHVRSHLVAPTPSKGQGCDQICVEPLTATPFGSPCGCVFPMKVQLLLDIAPFSVFPVMNELEIEIAEGTYLTQSQVKIMGASADTHNQGRTVVDVNLVPLGEKFDNTTAVLTSERFWHKNVPLNSTLFGSYDVMYVRYPGLPSSPPYGSYMGKGPSGSPEDLPISVNFINKSKRMSVRTIAIIALSAFVLLLVFLGALFVYVKWRKFRRPSSAVGPAFTSSINKRSSTGSVLSSSTASSTSVSLISTMATCIPSVKTFSRPALVKATDKFSSKRLLGEGGFGRVYHGIIEDGTEVAVKLLTRENNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRMRCLVYELVHNGSVESHLHGVDMKKGPLDWDARLKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTSKVSDFGLAREATEGSQHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVNMSQPQGQENLVTWARTLLTSREGLEQLIDPSLAGSYDFDDMARVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDTDETSGDFCSQKESSARDSDFKGDHLVPSDSSWWNVGGLTPRLTYGLASSFITMEYSSGPLEEMGNRPHSTSSLVGDETSLPMRHGNRSGPLRTIRSKPALYRLSGSRSDHGGLLSRQIWNDGYWV 722
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5195317 5211939 - Conep18aG0084300.1 Cone18ag0817 457778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0817 722 PANTHER OS01G0750732 PROTEIN 67 616 IPR050885 -
Cone18ag0817 722 Gene3D Phosphorylase Kinase; domain 1 289 393 - -
Cone18ag0817 722 FunFam receptor-like serine/threonine-protein kinase ALE2 290 393 - -
Cone18ag0817 722 MobiDBLite consensus disorder prediction 658 688 - -
Cone18ag0817 722 Gene3D Transferase(Phosphotransferase) domain 1 394 616 - -
Cone18ag0817 722 ProSiteProfiles Protein kinase domain profile. 317 593 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0817 722 MobiDBLite consensus disorder prediction 660 674 - -
Cone18ag0817 722 MobiDBLite consensus disorder prediction 40 54 - -
Cone18ag0817 722 MobiDBLite consensus disorder prediction 20 62 - -
Cone18ag0817 722 FunFam Receptor-like serine/threonine-protein kinase ALE2 394 611 - -
Cone18ag0817 722 SUPERFAMILY Protein kinase-like (PK-like) 297 593 IPR011009 -
Cone18ag0817 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone18ag0817 722 Pfam Protein tyrosine and serine/threonine kinase 320 588 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone18ag0817 722 MobiDBLite consensus disorder prediction 599 619 - -
Cone18ag0817 722 CDD STKc_IRAK 323 593 - -
Cone18ag0817 722 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0816 Cone-Chr11:6690935 Cone18ag0817 Cone-Chr18:5195317 0 dispersed
Cone17ag0100 Cone-Chr17:531345 Cone18ag0817 Cone-Chr18:5195317 4.70E-198 dispersed
Cone17ag0409 Cone-Chr17:1940575 Cone18ag0817 Cone-Chr18:5195317 2.47E-119 dispersed
Cone18ag0752 Cone-Chr18:4146543 Cone18ag0817 Cone-Chr18:5195317 1.46E-116 dispersed
Cone18ag0817 Cone-Chr18:5195317 Cone7ag1127 Cone-Chr7:8486782 1.86E-198 dispersed
Cone11ag0794 Cone-Chr11:6350743 Cone18ag0817 Cone-Chr18:5195317 2.00E-95 wgd
Cone11ag0812 Cone-Chr11:6623544 Cone18ag0817 Cone-Chr18:5195317 2.93E-88 wgd
Cone11ag0700 Cone-Chr11:4775332 Cone18ag0817 Cone-Chr18:5195317 1.71E-117 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82327 PF01556 DnaJ_C 2.10E-38 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0817 - - - 0.0