Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0851 ATGCGCAGACTCGTTTCAGTTTCTTCCGAACTCAAGTCGACTAGAAAACCCACCTCCTCTTCTTCATTTTATTACTCACACAATTCAACTTCTACCTCGTCAATCACTACGAACCCCACTAGTCTACCTAGGTTCTTCACAAAACATTCAAATTCGCCAAAATCATCAGAATTTCCATCTGGGTATGTACCCGGGTATCAAGGCTACGGCTCCTTGAACCGGTCTTCCTCGTCTCAGAGAGTGTATTCTCTGCACCCAACGAGTCTGCTAAATTGTGAGAGGTACGTGGCTAAATCAAGGGGTTTTAGCAGCGAACCGGACCGAGAGTGTATAGAGTATGATGTGGTTATTGTCGGAGCTGGACCTGCCGGATTAGCTGCAGCGATACGTTTGAAGCAAATGTGCCATGAGAAGGACCTTGATTTGTCCGTCTGTGTCGTTGAGAAGGGTGCTGAAGTTGGTGCTCATATTCTTTCTGGGAATGTTTTTGAACCACGGGCTTTGGATGAACTTATCCCAAGTTGGAGGCAGGATGAGGAACTAATTGGAGTTCCTGTTACTTCTGACAAGTTTTGGTTTCTTACAAAGAATCGGGCCATTTCACTTCCATGCCCTTTCAATAACAAAGGAAACTATGTTATAAGTTTAAGTCAGCTAGTCCGTTGGATGGGATCAAAAGCGGAAGAGTTGGGAATAGAAATCTATCCAGGCTTCGCTGCTAGTGAGGTGTTATTTGATAAAAATGAGAAAGTTATTGGTATTGGAACTAATGATATGGGAGTTGCCAAAGATGGGTCAAAGAAAGACAATTTTCAGCGTGGAGTAGAATTGAAAGGGGGCGTTACACTTTTGGCTGAGGGATGTCGAGGATCTTTATCAGAGAAAATAATGAGAAAATATGGCTTGAGAGAAAAAGGACATGCTCAGCATCAAACATATGCTTTGGGAATTAAAGAGGTTTGGGAAGTAAATGAGGAAAAGCATAAGCCTGGTACTGTGCTTCACACTTTGGGTTGGCCCCTCGATCAAAAGACTTATGGTGGATCATTTTTGTACCACATGAAAGATAGACAGATTTCGATTGGCCTTGTGGTTGCTTTAAATTATCAGAACCCCTTCTTGAGTCCTTATGAAGAATTTCAGAAACTAAAACACCATCCTTCCATCAGACCACTCCTGGATGGTGGAACTGTTCTTCAATATGGTGCTCGCACTTTAAATGAGGGTGGTTTTCAGTCAATTCCATATCCAGTTTTTCCTGGAGGAGCGATTATTGGATGCTCAGCTGGCTTCCTAAATGTGCCAAAGATAAAGGGAACACACAGTGCAATGAAATCAGGGATGCTGGCTGCAGAGGCTGCATTTGGCGAACTTAATGGAAGCTTGAAAATGGACGTTTATTGGGATACTTTAAGAGACTCCTGGATATGGGATGAACTATACCGGGCTCGGAATTACAGACCTGCGTTTGAGCATGGGCTTGTCCCAGGGTTGGCCTTTAGTGCTTTGGAGCACTACATACTCAAAGGAAGGTCTCCTCTAACACTCAAGCATGGAAAGCCTGATCACGAATCTACAGATCTTGCCCATTTGCACTCTCCAATTCAATATCCAAAGCCTGATGGAGTTGTATCATTCGACGTACCAACCTCTCTACACAGGAGCAACACAAATCATGAACATGACCAGCCAGCTCATCTTCAGTTAAAGGACCCCACAATTCCGGAGCGAGTGAATTTACCAGACTATGCTGCACCTGAGTCACGATATTGTCCTGCTCGAGTATACGAGTATATAGCAGATGAAAAGCATGAAATGAAGTTGCAAATAAATGCTCAAAATTGCCTGCACTGCAAGGCTTGTGATATAAAAGACCCGATCCAAAACATAGAGTGGACTGTGCCAGAAGGAGGAGGTGGTCCAGGATACAATGTCATGTAA 1941 43.69 MRRLVSVSSELKSTRKPTSSSSFYYSHNSTSTSSITTNPTSLPRFFTKHSNSPKSSEFPSGYVPGYQGYGSLNRSSSSQRVYSLHPTSLLNCERYVAKSRGFSSEPDRECIEYDVVIVGAGPAGLAAAIRLKQMCHEKDLDLSVCVVEKGAEVGAHILSGNVFEPRALDELIPSWRQDEELIGVPVTSDKFWFLTKNRAISLPCPFNNKGNYVISLSQLVRWMGSKAEELGIEIYPGFAASEVLFDKNEKVIGIGTNDMGVAKDGSKKDNFQRGVELKGGVTLLAEGCRGSLSEKIMRKYGLREKGHAQHQTYALGIKEVWEVNEEKHKPGTVLHTLGWPLDQKTYGGSFLYHMKDRQISIGLVVALNYQNPFLSPYEEFQKLKHHPSIRPLLDGGTVLQYGARTLNEGGFQSIPYPVFPGGAIIGCSAGFLNVPKIKGTHSAMKSGMLAAEAAFGELNGSLKMDVYWDTLRDSWIWDELYRARNYRPAFEHGLVPGLAFSALEHYILKGRSPLTLKHGKPDHESTDLAHLHSPIQYPKPDGVVSFDVPTSLHRSNTNHEHDQPAHLQLKDPTIPERVNLPDYAAPESRYCPARVYEYIADEKHEMKLQINAQNCLHCKACDIKDPIQNIEWTVPEGGGGPGYNVM 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5824870 5841287 + Conep18aG0087700.1 Cone18ag0851 457812

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0851 646 Pfam ETF-QO, ubiquinone-binding 313 406 IPR049398 -
Cone18ag0851 646 Pfam NAD(P)-binding Rossmann-like domain 117 162 - -
Cone18ag0851 646 Pfam Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 542 644 IPR007859 GO:0051536(InterPro)
Cone18ag0851 646 SUPERFAMILY FAD-linked reductases, C-terminal domain 312 408 - -
Cone18ag0851 646 FunFam Electron transfer flavoprotein-ubiquinone oxidoreductase 547 641 - -
Cone18ag0851 646 Gene3D - 184 546 - -
Cone18ag0851 646 PANTHER ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE 97 646 IPR040156 GO:0004174(PANTHER)|GO:0004174(InterPro)|GO:0022900(InterPro)|GO:0022900(PANTHER)|GO:0031305(PANTHER)
Cone18ag0851 646 SUPERFAMILY FAD/NAD(P)-binding domain 111 543 IPR036188 -
Cone18ag0851 646 Gene3D - 112 483 IPR036188 -
Cone18ag0851 646 MobiDBLite consensus disorder prediction 7 40 - -
Cone18ag0851 646 Gene3D - 547 641 - -
Cone18ag0851 646 SUPERFAMILY 4Fe-4S ferredoxins 546 645 - -
Cone18ag0851 646 MobiDBLite consensus disorder prediction 1 40 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0851 K00311 - - vvi:100244062 989.178
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1268 Blo01g00193 . . Bda08g00158 . . . Bma05g01166 . . . Cma14g01519 . Car14g01343 Sed12g0692 . Cpe03g01278 Bhi01g01188 Tan10g1201 Cmetu06g1782 . Hepe05g1300 . Lcy11g1259 . . . . . . . . . Cone18ag0851 . . . . . . . . Bda13g00549 Bpe05g00974 . . . . . Cmo14g01554 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012450 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 29