Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone18ag0852 | ATGGACAAGGACAAGTCGCAAGGTCAGGGTGGAGGTTTTCCTCCTCCGTCAGGTCGTTACTCAGGCTTTTCACCTCCTGGCAATAATTTCAATTCAAAACCTGAGCAATCCTCATCTTCGATGTTATTTGCTTCGATGGCTTCTGGTGGGAGTGCAGAAATGGGTCAATTTAATCATGGAATGTCTGATTCTAATCACTTCAGTCACGATATTAGTCGAATGCCTGACAATCCACCAAGAAGTAGGGGGCACAGACGGGCCCACTCCGAAATCCTTACTCTTCCTGATGATATCAGTTTTGATAGTGATCTTGGAGTCGTAGGTGGGGCTGATGGGCCATCATTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTATCTTGATATGGATAAGTTCAATGCATCATCTGCAACGTCTGCATTTCAAGTGGGGGAGCCATCGTCAGCTGTAGCCGGAGGAACATCTGCTCCCACACCTGGATCAGCTACTTCTAATGAAAATCTTGCCATTGGGTCTAATGGGAGGCCTAGAATTAGGCACCAACATAGCCAGTCCATGGATGGGTCCACAACAATCAAACCAGAGATGCTTGTCTCAGGATCTGATGATATCTCTGCAGCTGATACCAAGAAAGCCATGTCAGCTGCAAAGCTTGCTGAGCTAGCACTGATTGATCCCAAACGTGCGAAGAGGATCTGGGCAAATAGGCAATCAGCTGCTAGATCAAAGGAAAGAAAGATGCGGTACATTTCTGAACTTGAACGGAAAGTGCAGACTTTGCAAACAGAAGCAACTTCTTTGTCTGCTCAGCTAACCCTCTTGCAGAGAGATACAAATGGTCTCACTGTTGAGAACAGTGAACTGAAATTGCGGTTACAATCAATGGAGCAACAGGTTCACCTGCAAGATGCTTTGAATGATGCATTGAAAGAGGAAATTCAGCATCTGAAAGTATTGACAGGTCAGACAATGCCAAATGGTGGGCCCCTCATGAACTTTGCTCCTCCCTTCGGAGCTGACCAGCAATTTTATTCCAACAACCATGCAGCTGCCATGCAAACTCTCCTGACTGCACAACAATTTCAGCAGATGCAGATTCAGTCTCAGAAGCAGCAGTTTCAGCAGCATCAATTACATCAGCAACTTCAGCAGCATCAACAACAGCAGCAGCAACAGCAACAAACTGGGGAGCCGAAAATGAGAGGGGGGCCCACATCTTCTCCGAGCCAGAACGATATTTCATCAGATATGAATTCTTCTTCCTCGAAGGACTGTTGA | 1281 | 46.06 | MDKDKSQGQGGGFPPPSGRYSGFSPPGNNFNSKPEQSSSSMLFASMASGGSAEMGQFNHGMSDSNHFSHDISRMPDNPPRSRGHRRAHSEILTLPDDISFDSDLGVVGGADGPSFSDDTEEDLLSMYLDMDKFNASSATSAFQVGEPSSAVAGGTSAPTPGSATSNENLAIGSNGRPRIRHQHSQSMDGSTTIKPEMLVSGSDDISAADTKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYISELERKVQTLQTEATSLSAQLTLLQRDTNGLTVENSELKLRLQSMEQQVHLQDALNDALKEEIQHLKVLTGQTMPNGGPLMNFAPPFGADQQFYSNNHAAAMQTLLTAQQFQQMQIQSQKQQFQQHQLHQQLQQHQQQQQQQQQTGEPKMRGGPTSSPSQNDISSDMNSSSSKDC | 426 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 5842041 | 5846348 | - | Conep18aG0087800.1 | Cone18ag0852 | 457813 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone18ag0852 | 426 | Gene3D | - | 227 | 280 | - | - | |
Cone18ag0852 | 426 | CDD | bZIP_plant_RF2 | 229 | 278 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone18ag0852 | 426 | Coils | Coil | 376 | 396 | - | - | |
Cone18ag0852 | 426 | SMART | brlzneu | 224 | 288 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone18ag0852 | 426 | FunFam | probable transcription factor PosF21 | 227 | 280 | - | - | |
Cone18ag0852 | 426 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 226 | 289 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone18ag0852 | 426 | MobiDBLite | consensus disorder prediction | 22 | 68 | - | - | |
Cone18ag0852 | 426 | SUPERFAMILY | Leucine zipper domain | 228 | 279 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone18ag0852 | 426 | MobiDBLite | consensus disorder prediction | 147 | 196 | - | - | |
Cone18ag0852 | 426 | Pfam | bZIP transcription factor | 228 | 280 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone18ag0852 | 426 | Coils | Coil | 244 | 313 | - | - | |
Cone18ag0852 | 426 | MobiDBLite | consensus disorder prediction | 1 | 86 | - | - | |
Cone18ag0852 | 426 | MobiDBLite | consensus disorder prediction | 378 | 426 | - | - | |
Cone18ag0852 | 426 | MobiDBLite | consensus disorder prediction | 69 | 86 | - | - | |
Cone18ag0852 | 426 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 68 | 401 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag0852 | Cone-Chr18:5842041 | Cone5ag0141 | Cone-Chr5:607378 | 2.45E-56 | dispersed | |
Cone11ag0660 | Cone-Chr11:4403987 | Cone18ag0852 | Cone-Chr18:5842041 | 5.34E-251 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45194 | PF01027 | Bax1-I | 9.90E-47 | CL0453 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone18ag0852 | - | - | - | 0.0 |