Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone18ag0872 | ATGTCCGAGTCTTATGATCAATCATCCCCTGCTTTTGACAGACCCAGGTCGGTGGCGAAGAAGGTTCTCGCTAAGTCCCAACATGAAGGAGCTGGTGCTGTTGTTAGAAGAAGCATCGGAAGTAATGATTTGAAGAATTTAGACCCATTTCTTATGTTGGATCAATTCTCAGTTAGCCCTCCTGCTGGATTTCCTGACCATCCCCACAGAGGGTTTGAAACTGTAACATATATGTTACAAGGAGGAATCACCCATCAAGATTTTGCTGGGCATAAGGGTACAATCTGGACAGGGGATGTGCAGTGGATGACAGCTGGCAGAGGGATTATCCACTCTGAAATGCCTGCTGGAGAAGGAACCCAAAAAGGTCTCCAACTATGGATCAATTTGAAATCAAGAGATAAAATGATTGAGCCAACATATCAAGAGCTACTAAGTGAGAATATTCCTAAAGTGGAAAAAGACGGTGTTAAGGTTAAGGTTATAGCTGGAGCATCAATGGGAGTTGAGTCTTTAGTTTATACTCAGACTCCAACAATGTATCTTGATTTCACTATAAAACCAAGAGCTCATGTGCATCAAAGCATTCCAGAATCTTGGAACTCTTTCATCTATGTAATAGAAGGTGAGGGGGTGGTGGGGTCTACCAACTCATTGCCCGTGACGGCTCATCATATTATTGTTCTGGGGCCCGGCAACGGCGTGAGTGTGTGGAACAGATCATCTGATCCGCTCAGATTCGTGCTAATTGCAGGACAACCATTAAATGAAGAAGTAGTTCAATATGGACCTTTTGTAATGAACACACAAGCTGAGATTAACCAAGCTATTGAGGACTATCATTACTCCAAGAATGGGTTTGAAATGGCCAAGTCTTGGAGGTCTCAATAA | 891 | 43.1 | MSESYDQSSPAFDRPRSVAKKVLAKSQHEGAGAVVRRSIGSNDLKNLDPFLMLDQFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIWTGDVQWMTAGRGIIHSEMPAGEGTQKGLQLWINLKSRDKMIEPTYQELLSENIPKVEKDGVKVKVIAGASMGVESLVYTQTPTMYLDFTIKPRAHVHQSIPESWNSFIYVIEGEGVVGSTNSLPVTAHHIIVLGPGNGVSVWNRSSDPLRFVLIAGQPLNEEVVQYGPFVMNTQAEINQAIEDYHYSKNGFEMAKSWRSQ | 296 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 6073918 | 6075745 | + | Conep18aG0089800.1 | Cone18ag0872 | 457833 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone18ag0872 | 296 | PANTHER | PIRIN-RELATED | 3 | 296 | IPR012093 | - | |
Cone18ag0872 | 296 | Gene3D | Jelly Rolls | 150 | 255 | IPR014710 | - | |
Cone18ag0872 | 296 | CDD | cupin_pirin_C | 178 | 254 | - | - | |
Cone18ag0872 | 296 | Pfam | Pirin C-terminal cupin domain | 181 | 285 | IPR008778 | - | |
Cone18ag0872 | 296 | Gene3D | Jelly Rolls | 29 | 281 | IPR014710 | - | |
Cone18ag0872 | 296 | Pfam | Pirin | 35 | 128 | IPR003829 | - | |
Cone18ag0872 | 296 | FunFam | pirin | 29 | 170 | - | - | |
Cone18ag0872 | 296 | PIRSF | Pirin | 14 | 294 | IPR012093 | - | |
Cone18ag0872 | 296 | CDD | cupin_pirin_N | 33 | 130 | - | - | |
Cone18ag0872 | 296 | SUPERFAMILY | RmlC-like cupins | 17 | 294 | IPR011051 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag0872 | Cone-Chr18:6073918 | Cone9ag0037 | Cone-Chr9:158582 | 6.02E-143 | dispersed | |
Cone11ag0632 | Cone-Chr11:4131211 | Cone18ag0872 | Cone-Chr18:6073918 | 1.67E-196 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone18ag0872 | K06911 | - | csv:101205861 | 502.286 |