Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone18ag0900 | ATGGTCGCGGTGAACGCGGCGCTGGGAACATTGGTAATGGTACTCAACCGGTGGCTACAACTCAGTCGGACTCCGCCACTAGTTGCAAAAGCATTAGCGTCTCCGGCGCCTGCTTCCACTTCTTCAGCGCCGTCTATGCCGTCTTCGACTCAGGCGCCGGCTCCGGTATCTAGTCCGGCGGCTAATCCTCCGCAGACTCAGAGTTCTGCGGCTCCTGCTCCTGTTTCCGTTGTGTCTACAACAGCCTCGGCGATTGGGACTTCCTTGAACAGTGAGGTCGAGAAGAAGCTTGTACTTCAGTCGCCTCCTCCGTCTTCGTCGAAGGCGCTGCGTTTTCCACAGAGGCCTGGATATGGTACCATTGGCACAAAAATTCTTGTTCGGGCTAATCATTTTCTAGTGGAGATTGCAGACAGGGATCTTCATCAATACGATGTGTCCATGATTCCTGAAGTTACCTCCAAGAAAGTTTGTAGAGATGTGATGAAGGTGCTTTCAGATTTGCATCGTGCATCACACTTGGGTGGGAGAATGAAAATCCGTGAATACCGAGTGACCATCAAATTTGCCTCCAAGCCTGACCTGCATCATCTACAACAGTTTATAAGTGGTAGGCAGCTGGATTTGCCTCAAGAGACTATTCAAGTGCTTGACGTAGTTCTTCGAGCATCTCCATCCGAGAAGTGCACAGTCATTGGGAGGTCTTTTTTTGCACCTAATTTAGGGCCAAAGGGTGAGTCTGGAAGGGGAGACCTTGGCAATGGTCTTGAATATTGGAGGGGGTTTTATCAAAGCCTTTGTCCAACCCAGATGGGATTGTCACTTAATGTTGATATCTCTGCAACATCTTTCTATGATGCAATTCCAGTAACAGATTTCATTAAAAAACATTTTAATTTTAGAGATACTTCAAGGCTGTTATCCGATCAAGATCGTGTTAAGATCAAGAGGGCTTTGAGAGGAGTTAGGGTGGAAGTAACTCATCAGGGAAATTCAAAAAAATACAAAATTACTGGAGTGTCATCCCTACTTTTAAGCCAACTCACGTTCCCTTTGGAGGATGGCTCAAGGATGTCAGTTGTTAAATATTTCCGTGAGAAGTATGGTGTTGTGCTTAAAGATGTGGCTCTTCCCGCTCTACAAGCTGGAAAAGATTCAAATCCTGTGTTTTTGCCTATGGAGGTCTGTCAAATAGTTTCTGGACAAAGATATACTAAGAAGTTGAATGAGGCACAAGTAACTGCTCTATTAAGAAAAACTTGTCGGCGACCAGATCTGAGGGAAGAGGACATAAAGCAGATGGTGGAGCGGAGTAATTTCAATGAGGACAAGCTTGTAAGTAATGAATTCGGGATTCGAGTGAAGGAACAACTGACTTTGGTTGAGGCTCGTGTTTTACCACCTCCTATGGCTCAATTCTTCAAAAAAATGATTGATGGCGGTCGAGTGGAAATCTGGCCCTGCATTAATTTCTCTACACGAGTGCATCCAAACTTGCCAGTTGACTTTTGTGGGGAGTTGGTCAATATGTGCAACAGTAAGCGAATGAATTTCAATCCTGATCCATTGATTCCCATACGTTCTGCTAACCCTGCTCAAATTGAAAGGGCTCTTAATGAGGTGCACAAGCAATCACAAATTGAACTTAAGAGGAGGGGGCAGGAGAATAAACGGCTGCAGCTTCTAATCATTATTTTGCCTGATAAAACTGGATCCTATGGAACGATAAAACGAGTGTGTGAAACTGAACTTGGTATCATCTCTCAGTGCTGTCAGCCTAAGGAAGCATCAAAGCTCAAGAAACAGTATTTCGAAAATTCGGCCCTTAAAATCAATGTTAAGGTTGGGGGACGAAACACTGTGATGAATGATGCTATTCATGGAAGGATGCCTCTTGTGAATGATCGCCCGACAATAATTTTCGGGGCTGATGTAACACATCCACAACCTGGGGAAGACTCTAGCCCTTCAATAGCAGCGGTGGTTGCTTCCATGGACTGGCCTGAGGTGACCAAGTACAGAGGGATTGTCGTTGCGCAAGAGCACCGTCAGGAGATTCTTCAAGATCTCTTCAAAACTTTCCGAGATCCTCAGAAAGGAGAAGTCAGTGAAGGCATTGTTAGAGAATTACTAATTGCATTCAGACAATCAACCGGATATAAACCACATAGAATAATATTCTACAGATGGTACTCCAATCGAAAATTACTTGATTGTGCAGTTCCTCCAGCTTATTATGCCCACTTAACTGCTTTCCAAGCACGTTACTACATCAAAGGCAATGCCTCAGACAGTGCATCCACAGAGGGAGTCAGAAGTTCAGAGTTCCGTCCCCTTTCAACCATTCAGGAGCATATCAAAGATGTGATGTTCTTCTGTTGA | 2382 | 44.84 | MVAVNAALGTLVMVLNRWLQLSRTPPLVAKALASPAPASTSSAPSMPSSTQAPAPVSSPAANPPQTQSSAAPAPVSVVSTTASAIGTSLNSEVEKKLVLQSPPPSSSKALRFPQRPGYGTIGTKILVRANHFLVEIADRDLHQYDVSMIPEVTSKKVCRDVMKVLSDLHRASHLGGRMKIREYRVTIKFASKPDLHHLQQFISGRQLDLPQETIQVLDVVLRASPSEKCTVIGRSFFAPNLGPKGESGRGDLGNGLEYWRGFYQSLCPTQMGLSLNVDISATSFYDAIPVTDFIKKHFNFRDTSRLLSDQDRVKIKRALRGVRVEVTHQGNSKKYKITGVSSLLLSQLTFPLEDGSRMSVVKYFREKYGVVLKDVALPALQAGKDSNPVFLPMEVCQIVSGQRYTKKLNEAQVTALLRKTCRRPDLREEDIKQMVERSNFNEDKLVSNEFGIRVKEQLTLVEARVLPPPMAQFFKKMIDGGRVEIWPCINFSTRVHPNLPVDFCGELVNMCNSKRMNFNPDPLIPIRSANPAQIERALNEVHKQSQIELKRRGQENKRLQLLIIILPDKTGSYGTIKRVCETELGIISQCCQPKEASKLKKQYFENSALKINVKVGGRNTVMNDAIHGRMPLVNDRPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEVTKYRGIVVAQEHRQEILQDLFKTFRDPQKGEVSEGIVRELLIAFRQSTGYKPHRIIFYRWYSNRKLLDCAVPPAYYAHLTAFQARYYIKGNASDSASTEGVRSSEFRPLSTIQEHIKDVMFFC | 793 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 6382469 | 6389572 | + | Conep18aG0092600.1 | Cone18ag0900 | 457861 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone18ag0900 | 793 | Gene3D | - | 474 | 627 | - | - | |
Cone18ag0900 | 793 | SMART | DUF1785_2 | 230 | 287 | IPR014811 | - | |
Cone18ag0900 | 793 | MobiDBLite | consensus disorder prediction | 36 | 75 | - | - | |
Cone18ag0900 | 793 | ProSiteProfiles | Piwi domain profile. | 561 | 729 | IPR003165 | GO:0003676(InterPro) | |
Cone18ag0900 | 793 | Pfam | Piwi domain | 562 | 729 | IPR003165 | GO:0003676(InterPro) | |
Cone18ag0900 | 793 | SMART | Piwi_a_2 | 561 | 759 | IPR003165 | GO:0003676(InterPro) | |
Cone18ag0900 | 793 | Pfam | Argonaute linker 1 domain | 232 | 285 | IPR014811 | - | |
Cone18ag0900 | 793 | SUPERFAMILY | PAZ domain | 282 | 441 | IPR036085 | GO:0005515(InterPro) | |
Cone18ag0900 | 793 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2C | 115 | 729 | - | GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER) | |
Cone18ag0900 | 793 | Pfam | PAZ domain | 292 | 416 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cone18ag0900 | 793 | Gene3D | - | 629 | 735 | IPR036397 | GO:0003676(InterPro) | |
Cone18ag0900 | 793 | Gene3D | - | 739 | 793 | IPR036397 | GO:0003676(InterPro) | |
Cone18ag0900 | 793 | CDD | PAZ_argonaute_like | 287 | 399 | - | - | |
Cone18ag0900 | 793 | Gene3D | paz domain | 281 | 404 | - | - | |
Cone18ag0900 | 793 | ProSiteProfiles | PAZ domain profile. | 289 | 400 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cone18ag0900 | 793 | SUPERFAMILY | Ribonuclease H-like | 556 | 729 | IPR012337 | - | |
Cone18ag0900 | 793 | Pfam | N-terminal domain of argonaute | 176 | 221 | IPR032474 | - | |
Cone18ag0900 | 793 | SMART | PAZ_2_a_3 | 292 | 416 | IPR003100 | GO:0003723(InterPro)|GO:0005515(InterPro) | |
Cone18ag0900 | 793 | Pfam | Argonaute linker 2 domain | 427 | 470 | IPR032472 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag0593 | Cone-Chr18:2966035 | Cone18ag0900 | Cone-Chr18:6382469 | 0 | dispersed | |
Cone18ag0900 | Cone-Chr18:6382469 | Cone19ag0371 | Cone-Chr19:3158324 | 2.72E-231 | dispersed | |
Cone11ag0605 | Cone-Chr11:3730042 | Cone18ag0900 | Cone-Chr18:6382469 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone18ag0900 | K11593 | - | vvi:100258447 | 826.239 |