Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0964 ATGGAGATGATTCCGGAATCAAAACCAAAGAAATTCCACATGGGGCGGGTCCCAGATTCAATTGTTCAAACAACCTCACCAAGAGAAGCAGGTCATGTTTCAAATGCTCGGTCAGCTATGGTAAGGGAAGAAGTAAGAAGATATGATCCTAGGGACTCTCAAGAGTTAGACTCTCCTTTTCCTACAAGAATTTGGAAAGGAAAGACCTTTTTGCCAGAGAATGAAGAGCTCATGGATGAAGTAACAATCAAGAGCAATGATGATTCAAATGATGAAGGTGGTCCAAGTTCTTTCTCTGGAGCTAGTCATCCTCCTGAACCCATTAATTCAGATCCCATGAGAACTGTCTTTGTACCACTACATCAGAACAAAACCGAGGCTCGATGTCTGATGAAGAGCTTGTCTATGAAGGGTCCTTTTCTTGAAGATCTTTCGATCCGGGTCCCACCAAAGAAACTGAGCCCGACAATTATTTCCCCAACAGGAAGTTTTGTTGAAGAACCTAATGACTTTTGTGCATCATCTTCTCCGTTTTTCATTCAGCGTGCATCTCAGAATACAGAGAGCTCTCTCCTTCATCCAGATTCTGAAGAGAAGGAATGCATTTGGGATGCTTCTTTGCCTCCAAGTGGAAATGTAAGTCCACATAGTAGTATAGACAGCATAGGTGTTGCTACAGCCATGAGCGTCGTTAATAGCTGTGCTAGCACATATAGGAGTGAGGTGATCACTAGTGATGGAATGCTTAGTGTGGGAAGGAATTGTGAGAGTACAAAAGGAAGTCTAAGTGTTAGAGGAGACCATTCAATGGAGAGTGCAAAAACAAGTATGAGCCGAGCAAGTGATAGTAGTGGTCTTAGTGATGAGAGTAGTTGGAGCAACGTGACTGGAAGTGCCAACAAGCCTCACAAAGGGAATGATCCTAGGTGGAAGGCCATCCTTGCTATACGAGCAAGAGATGGGATTCTAGGAATGAGTCAATTTAGATTGCTCAAAAGGCTTGGATGTGGTGACATTGGTAGCGTTTATCTCTCGGAATTGAGCGGGACCCGCTGTTACTTCGCTATGAAAGTGATGGACAAGGCATCCCTTGCTAGCAGGAAGAAGTTGACTAGAGCCCAGACAGAAAGAGAGATTCTGCAGTTGCTGGACCATCCGTTTCTGCCCACTTTATATACCCATTTTGAGACTGATAGATTTTCATGTTTAGTCATGGAGTATTGTCCAGGAGGTGATCTTCATGCTCTAAGACAACGCCAACCAGGCAGACATTTTTCAGAGTATGCTGCACGGTTTTATGCAGCAGAGGTTCTATTGGCACTTGAATATCTTCACATGCTGGGAGTTGTGTACAGAGACTTGAAACCCGAAAATGTTCTGGTCCGTGATGATGGCCACATAATGCTCTCTGACTTTGACCTTAGCCTACGATGTGCAGTTTCACCGACCCTCATAAAATCCTCTTCATTCAATTATGATCCTTCAAAACGAGCTTCTAGTGGCTCATTTTGTGTCCAGCCTACCTGTAATGAGCCCACATCATCATGCATCCAGCCCGCTTGCTTTCTTCCACGTCTCTTCCCTCAAAAGAGCAATAAGAACCGAAAACCACGAACGGAACCCTCATTACCATTCAGTACACTCCCTGAGCTTGTCGCGGAGCCCACGACAGCCCGGTCCATGTCATTTGTCGGGACCCATGAATATCTAGCTCCCGAAATTATCAAAAAAGAAGGCCATGGAAGTGCTGTTGATTGGTGGACATTTGGCATTTTCTTGCATGAACTTTTATACGGTAAGACCCCATTCAAAGGGTCTGGAAACACAGCTACACTGTTCAATGTGGTGGGCCAGCAGTTGAGATTCCCTGAATCTCCAGCAACTAGTTATGCAAGCCGGGATCTCATCAAGGGTTTGCTTGTAAAGGAGCCACAGCATAGGCTTGGGGTGAAGAGAGGTGCAACTGAGATTAAGCAGCACCCTTTCTTTGAAGGTGTGAATTGGGCGTTGATAAGGTGCAGCACTCCACCTGAAGTGCCTAGACCAGTGGAGACCGAGGTTCTGCCTGGGAAGTTCGGGCAGATTGGCACCGTAGGGGTGGGCAGTAACAGTAAGAGGATGGTAGGTACAGACATGATGAAATCTGGGGGTAAATATCTCGACTTTGAGTTCTTTTAA 2178 45.45 MEMIPESKPKKFHMGRVPDSIVQTTSPREAGHVSNARSAMVREEVRRYDPRDSQELDSPFPTRIWKGKTFLPENEELMDEVTIKSNDDSNDEGGPSSFSGASHPPEPINSDPMRTVFVPLHQNKTEARCLMKSLSMKGPFLEDLSIRVPPKKLSPTIISPTGSFVEEPNDFCASSSPFFIQRASQNTESSLLHPDSEEKECIWDASLPPSGNVSPHSSIDSIGVATAMSVVNSCASTYRSEVITSDGMLSVGRNCESTKGSLSVRGDHSMESAKTSMSRASDSSGLSDESSWSNVTGSANKPHKGNDPRWKAILAIRARDGILGMSQFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHALRQRQPGRHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIKSSSFNYDPSKRASSGSFCVQPTCNEPTSSCIQPACFLPRLFPQKSNKNRKPRTEPSLPFSTLPELVAEPTTARSMSFVGTHEYLAPEIIKKEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNTATLFNVVGQQLRFPESPATSYASRDLIKGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVETEVLPGKFGQIGTVGVGSNSKRMVGTDMMKSGGKYLDFEFF 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7023430 7026902 - Conep18aG0099100.1 Cone18ag0964 457925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0964 725 ProSiteProfiles Protein kinase domain profile. 328 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0964 725 Gene3D Phosphorylase Kinase; domain 1 326 411 - -
Cone18ag0964 725 Gene3D Transferase(Phosphotransferase) domain 1 412 479 - -
Cone18ag0964 725 MobiDBLite consensus disorder prediction 1 64 - -
Cone18ag0964 725 FunFam Serine/threonine-protein kinase D6PK-like 326 411 - -
Cone18ag0964 725 MobiDBLite consensus disorder prediction 258 301 - -
Cone18ag0964 725 SUPERFAMILY Protein kinase-like (PK-like) 310 685 IPR011009 -
Cone18ag0964 725 Pfam Protein kinase domain 329 478 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0964 725 Pfam Protein kinase domain 560 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0964 725 FunFam serine/threonine-protein kinase D6PK-like 558 681 - -
Cone18ag0964 725 MobiDBLite consensus disorder prediction 39 56 - -
Cone18ag0964 725 MobiDBLite consensus disorder prediction 1 15 - -
Cone18ag0964 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone18ag0964 725 SMART serkin_6 328 663 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag0964 725 FunFam serine/threonine-protein kinase D6PK-like 412 479 - -
Cone18ag0964 725 MobiDBLite consensus disorder prediction 84 113 - -
Cone18ag0964 725 MobiDBLite consensus disorder prediction 258 305 - -
Cone18ag0964 725 Gene3D Transferase(Phosphotransferase) domain 1 558 680 - -
Cone18ag0964 725 CDD STKc_phototropin_like 326 682 - -
Cone18ag0964 725 PANTHER FLIPPASE KINASE 1-RELATED 193 685 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0177 Cone-Chr10:861393 Cone18ag0964 Cone-Chr18:7023430 7.62E-178 dispersed
Cone18ag0964 Cone-Chr18:7023430 Cone5ag1793 Cone-Chr5:12725115 6.65E-221 dispersed
Cone11ag0540 Cone-Chr11:3027379 Cone18ag0964 Cone-Chr18:7023430 0 wgd
Cone14ag0490 Cone-Chr14:2403091 Cone18ag0964 Cone-Chr18:7023430 0 wgd
Cone15ag0519 Cone-Chr15:2535127 Cone18ag0964 Cone-Chr18:7023430 8.83e-316 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82333 PF00271 Helicase_C 3.80E-07 CL0023 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0964 - - - 0.0