Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0978 ATGGAGGTGGAGTGGGAGGAGAAGGAGGCGGAGGAGGAAAGGGGGAAGCGAAGGAAAAGGGAGGTGGAAGAGGAAGACGATCGCTGCACAGAGGTGGTTGAGCCGGAGAGTGTTCTTCCAAGGATGATTCTCACAGTTCTGCTTGTTGAAGCTGATGATTCCACTCGTCAGATCATCGCCGCTCTTCTTCGTAGATGCAGTTACAGAGTCTGTGCAGTTCCTGATGGATTAGAAGCATGGGAGACTTTAAAGGGGAGTCCGAAAAACATAGATCTAATATTAACTGAAGTCAATCTGCCATCGATATCCGGATTCGCACTTCTTACTTTAGTCATGGAGCATGACATTTGCAAAAACATTCCTGTTATAATGATGTCTTCAAATGATTCAATCAGCATTGTATTGAAATGCATGTTCAAAGGAGCGGCCGACTTTCTCATTAAGCCTGTTAGGAAGAATGAGCTGAAGAACCTATGGCAGCATGTATGGAGAAGGCAAACTTTAATTGGTGGACAAATTCCTCAAAAATTAACTGTGCCGCAAAATAAAGTTGAAGCAACCTCTGAGAATAAGGCAATCAGTAATTCAAGTGAATATGCAGATTCTGGAAAGAAAAATAAGGAATGTAGTGAGAAGGGAGAGGATACCCAAAGCTCTTGTACAAACCCTTGCTTGGAAGAGGAGAGTCCATACATCCCAAATATGCATTGTCTTTCACAGCTTAATAATAGGAGCGCTTCTAGTTTAAGAAACTTGGAGATAGAGAAGCATGAGCTCAGTGGTAAACCGCATAGGGAGTTTGATATGATTGAGAGAAACACTGGAGAGAGGTCAGAAAGGTTAGGATCAGAGAATGTAGCATGTGATAAAGCTTACTTCTCAAGTAACTTGAGACTTCAAGGAGACCAGGCTTGTGCAGAAACAGTGACTCGACATCTATTTATGGGGCCTCAGTTTGATAGAGACAATGCTGATAATACCCGAGAAATTGATAGCTCCAATAATGAACAAGATAAACCTTCTACAGCCATCGACTTCATTGGAACGTTTTATAATGGCCCGATGCCCACTTATGGAGTCACAGGTTTCAATGATGCCGGTACAAACAAACAGCTTAATCCACATCTGGAACTTTCTCTGAGAAGTGTCTGTTCAAGCAGCTCAAACAACCAGCTCAATCATTCTAATGCATCAGCCTTTTCATGGTACAATAATTGTAAGACCTTGCTGCCCTTTTCTCATATGCTCTCTGTTGATCAGACTAGATCAGAGGCAGATGCCAGTGAATCACATAATCCATTGCCAAACCAATTCTCTGAAAACTCGTGCTGTACTTCTCAAAGGCATGGAGTAATCCCTGGACAATCTGAACAAAATTCCTACGCAGATCCTCATATGGGTCGGATTCCAGATCTGGAAACATGCACACAATATGGTCATGCACCATCTGTTTTCTCTACTCAAACCCGACCAGCCCAGCAGGAAGACCAGCTGCACTTTCCCATGACTATATCAACGAACTCTGATCTTAATATTCCCAACTTGGAACAAGCTCAGAATCAATTTGAAAATAACTCTGATGAGTCTCCAGAAGAGGGAAAATTTTTGGAACCCACCAGACAAGAGGTGAAAAATAAATCTTCTGCCCCTACTCAAAGTGCGAGTAGTGGTTTATGTGATGGTGCTCCGGATCTTGTTAATAGCAATGTGTATGGAAGCATTTGTAGCAGAAATGATGGTAGTGCCTTGTCTATGGGATTGGAAAAGAAGATGGCAGACACTGATTCGGTGAAGGATAGCAAGCTAATTGTTCAGGAAGGATTTAAAGGAATGGACCTTCATCGTTCTAGTCAAAGGGAGGCTGCTCTGTTGAAGTTCCGAATGAAACGAAAAGACCGATGCTATGAGAAAAAGGTAAGATACCAAAGCCGACAGAAACTGGCAGAGCAGAGACCTCGAATGAAAGGACAATTTGTGCGTAGACAACAACCGTCAGGTGCTGATTATCCTGCTACTGCTTCATGA 2025 42.81 MEVEWEEKEAEEERGKRRKREVEEEDDRCTEVVEPESVLPRMILTVLLVEADDSTRQIIAALLRRCSYRVCAVPDGLEAWETLKGSPKNIDLILTEVNLPSISGFALLTLVMEHDICKNIPVIMMSSNDSISIVLKCMFKGAADFLIKPVRKNELKNLWQHVWRRQTLIGGQIPQKLTVPQNKVEATSENKAISNSSEYADSGKKNKECSEKGEDTQSSCTNPCLEEESPYIPNMHCLSQLNNRSASSLRNLEIEKHELSGKPHREFDMIERNTGERSERLGSENVACDKAYFSSNLRLQGDQACAETVTRHLFMGPQFDRDNADNTREIDSSNNEQDKPSTAIDFIGTFYNGPMPTYGVTGFNDAGTNKQLNPHLELSLRSVCSSSSNNQLNHSNASAFSWYNNCKTLLPFSHMLSVDQTRSEADASESHNPLPNQFSENSCCTSQRHGVIPGQSEQNSYADPHMGRIPDLETCTQYGHAPSVFSTQTRPAQQEDQLHFPMTISTNSDLNIPNLEQAQNQFENNSDESPEEGKFLEPTRQEVKNKSSAPTQSASSGLCDGAPDLVNSNVYGSICSRNDGSALSMGLEKKMADTDSVKDSKLIVQEGFKGMDLHRSSQREAALLKFRMKRKDRCYEKKVRYQSRQKLAEQRPRMKGQFVRRQQPSGADYPATAS 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7213447 7217925 - Conep18aG0100500.1 Cone18ag0978 457939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0978 674 MobiDBLite consensus disorder prediction 1 26 - -
Cone18ag0978 674 PANTHER TWO-COMPONENT RESPONSE REGULATOR 25 253 IPR045279 GO:0009736(InterPro)
Cone18ag0978 674 Gene3D - 42 218 - -
Cone18ag0978 674 MobiDBLite consensus disorder prediction 542 558 - -
Cone18ag0978 674 ProSiteProfiles Response regulatory domain profile. 45 163 IPR001789 GO:0000160(InterPro)
Cone18ag0978 674 SMART REC_2 44 159 IPR001789 GO:0000160(InterPro)
Cone18ag0978 674 MobiDBLite consensus disorder prediction 643 674 - -
Cone18ag0978 674 MobiDBLite consensus disorder prediction 527 541 - -
Cone18ag0978 674 MobiDBLite consensus disorder prediction 317 341 - -
Cone18ag0978 674 MobiDBLite consensus disorder prediction 180 200 - -
Cone18ag0978 674 CDD psREC_PRR 46 149 - -
Cone18ag0978 674 Pfam CCT motif 619 661 IPR010402 GO:0005515(InterPro)
Cone18ag0978 674 Pfam Response regulator receiver domain 46 157 IPR001789 GO:0000160(InterPro)
Cone18ag0978 674 MobiDBLite consensus disorder prediction 180 222 - -
Cone18ag0978 674 ProSiteProfiles CCT domain profile. 619 661 IPR010402 GO:0005515(InterPro)
Cone18ag0978 674 SUPERFAMILY CheY-like 44 171 IPR011006 -
Cone18ag0978 674 MobiDBLite consensus disorder prediction 9 26 - -
Cone18ag0978 674 Coils Coil 5 25 - -
Cone18ag0978 674 MobiDBLite consensus disorder prediction 522 561 - -
Cone18ag0978 674 MobiDBLite consensus disorder prediction 423 445 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1299 Cone-Chr13:9702566 Cone18ag0978 Cone-Chr18:7213447 7.10E-12 dispersed
Cone18ag0310 Cone-Chr18:1521944 Cone18ag0978 Cone-Chr18:7213447 6.79E-50 dispersed
Cone18ag0978 Cone-Chr18:7213447 Cone3ag0296 Cone-Chr3:1530099 2.78E-42 dispersed
Cone1ag1021 Cone-Chr1:55118294 Cone18ag0978 Cone-Chr18:7213447 3.99E-85 wgd
Cone18ag0978 Cone-Chr18:7213447 Cone5ag0728 Cone-Chr5:3135786 5.80E-93 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45207 PF00561 Abhydrolase_1 8.40E-22 CL0028 Cone TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0978 K12130 - vvi:100253885 502.671