Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0985 ATGGGGAAGAAAGGATCATTGGGCAGTAGCACTTCATGGCTAACTGCTGTTAAAAGAGCTTTCAGATCTCCTACTAAAGACGATGATGAGAAGAAGAGGGAGAAGAGGAGGTGGATATTCAGAAAACCAGCAAATCATTCTGAACCGGTGTCGTCCAGTCATACAACAACAGCTACAACAAAATTAAAAGAGGAGCAGAAACATGCTCTCGCCGTGGCGGTTGCCACCGCCGAGGCAGCAATAGCCACCGCTCAGGCCGCCGTGGAGGTGGCCAGGCTCACCAGGCCGTCTAACCACGCTAGAGAGCAACACTCCGCCATTATCATTCAAACTGCTTTTAGAGGATACCTGGCAAGGAGAGCACTAAGAGCACTAAAAGGGTTGGTCAAATTGCAAGCATTAGTGAGAGGACACAATGTGAGAAAGCAAGCAAAGATGACACTTAGATGTATGCAAGCTCTGGTTAGGGTTCAGTCTAGAGTCCTTGATCATAGGATGAGGCTGTCTCATGAAGGAAGTAGGAAATCTACTTTTAGTGACACTAATAGTATTCTTCAAGACATCTCAGACCGAAAATCGATCTCTCAATCAAGAGAAGGAAGTAGTGTTGCAGATGATTGGGATGAGAGGCCTCACACTATTGAAGAAGTTAAAGCCATGTTGCAGCATCGAAAAGAGGCAGCCATTAAGCGTGACAGAACCTTATCTCATGCCTTTTCTCAACAGATATGGAGGAATAGGAACTCATCAATAGGCAATGAAGACGAGCTTGGAGAGAGACCCAGGAGGCTTGATCAATTGATGACAAAGAAACCATGGGAGAACAGAGGAAGAGCTTCAACCGATCAAAGAGACCCCATCAAAACCGTTGAAATGGACACTTCTCAACCTTATTCATACTTAGCTACAAATTCTCATAGAATGACCCAACAACAACAAAGAATAAACCCACATCCTGTTTCTTCTTCTCCGCTACACCGAGCCCACCATCACCCTCCTTCAATCTCACCGTCCCCTTCCAAAGCCCGACCCATACAAATCCGATCCGCTAGCCCATGTTGTGGTAGAGAAGATAGGACCTTTCATACATCTCAAACACCAAGTTTAAGGTCAAATTATTACTATAGTGGTAATAGTCAACCTCACGGCAGAAATGGTGGAACCAGTAGTAGTAGTACTACTACTACAATAAGTACTCATAATGGTTCTTCTGCATTGCCTAATTACATGGCTGCCACTGAGTCAGCCAAGGCACGAGTCCGGTCTCAGAGTGCACCGAGACAGAGACCGGCTACACCGGAGAGAGACCGACCCGGGTCCGCAAGAAAAAGGCTTTCTTTTCCGGTCCCACCGGATAATTATGGCGGAGGGATCAGCTATGGAGGTTGTTATGGGAATAATTTGAGGAGTCCAAGCTTTAAGAGTGTTAGTGGAGTCGTAGTCGGAGAAGGAGGGCATTATGGACATTATGGACATTATGGTGGTGTAGAGCAACAGTCTAATTACTCTTCTTGCTGTACTGAAAGTCTTGGTGGTGAGATTTCTCCTTCTTCAACTAGTGATCTTAGAAGGTGGTTGAGGTGA 1584 45.83 MGKKGSLGSSTSWLTAVKRAFRSPTKDDDEKKREKRRWIFRKPANHSEPVSSSHTTTATTKLKEEQKHALAVAVATAEAAIATAQAAVEVARLTRPSNHAREQHSAIIIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQSRVLDHRMRLSHEGSRKSTFSDTNSILQDISDRKSISQSREGSSVADDWDERPHTIEEVKAMLQHRKEAAIKRDRTLSHAFSQQIWRNRNSSIGNEDELGERPRRLDQLMTKKPWENRGRASTDQRDPIKTVEMDTSQPYSYLATNSHRMTQQQQRINPHPVSSSPLHRAHHHPPSISPSPSKARPIQIRSASPCCGREDRTFHTSQTPSLRSNYYYSGNSQPHGRNGGTSSSSTTTTISTHNGSSALPNYMAATESAKARVRSQSAPRQRPATPERDRPGSARKRLSFPVPPDNYGGGISYGGCYGNNLRSPSFKSVSGVVVGEGGHYGHYGHYGGVEQQSNYSSCCTESLGGEISPSSTSDLRRWLR 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7248465 7250854 + Conep18aG0101300.1 Cone18ag0985 457946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0985 527 MobiDBLite consensus disorder prediction 21 36 - -
Cone18ag0985 527 MobiDBLite consensus disorder prediction 18 63 - -
Cone18ag0985 527 MobiDBLite consensus disorder prediction 189 211 - -
Cone18ag0985 527 MobiDBLite consensus disorder prediction 306 451 - -
Cone18ag0985 527 ProSiteProfiles IQ motif profile. 126 153 - -
Cone18ag0985 527 MobiDBLite consensus disorder prediction 251 294 - -
Cone18ag0985 527 Pfam Protein of unknown function (DUF4005) 351 461 IPR025064 -
Cone18ag0985 527 MobiDBLite consensus disorder prediction 358 410 - -
Cone18ag0985 527 Pfam IQ calmodulin-binding motif 129 145 IPR000048 GO:0005515(InterPro)
Cone18ag0985 527 Pfam IQ calmodulin-binding motif 104 123 IPR000048 GO:0005515(InterPro)
Cone18ag0985 527 Gene3D - 99 155 - -
Cone18ag0985 527 ProSiteProfiles IQ motif profile. 102 130 - -
Cone18ag0985 527 FunFam IQ-domain 11 101 152 - -
Cone18ag0985 527 SMART iq_5 101 123 IPR000048 GO:0005515(InterPro)
Cone18ag0985 527 SMART iq_5 124 145 IPR000048 GO:0005515(InterPro)
Cone18ag0985 527 MobiDBLite consensus disorder prediction 252 289 - -
Cone18ag0985 527 PANTHER IQ-DOMAIN 5-RELATED 13 440 - -
Cone18ag0985 527 MobiDBLite consensus disorder prediction 306 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0010 Cone-Chr14:61618 Cone18ag0985 Cone-Chr18:7248465 1.45E-19 dispersed
Cone18ag0985 Cone-Chr18:7248465 Cone20ag0275 Cone-Chr20:1221713 3.10E-19 dispersed
Cone11ag0521 Cone-Chr11:2740499 Cone18ag0985 Cone-Chr18:7248465 2.38E-287 wgd
Cone18ag0985 Cone-Chr18:7248465 Cone5ag0723 Cone-Chr5:3115307 3.52E-25 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0985 - - - 0.0