Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag0994 ATGGGTTCAAATGGAAAGGTCTATAGCTTCGATGAAGTGGCGAAGCATAATCACAGGAAGGATTGCTGGATTGTTATATCTGGGAAGGTGTACAATGTAACCTCTTTCCTAGAAGAACATCCCGGCGGCGATGAAGTCTTGCTATTAGCTGTCGAAAAAGATGCGACGGATGATTTTGAGGATGTGGGCCATAGTGAATCGGCAAAACAACTACTGGAAAATTACTATGTTGGCAAAGTCGACACTGCAACTCTTCCGGAGAAACCAAATTACCGTCCGACTCCAACTACAGAATCGGCATCGGAATCGAAGAAATCTTATGGGGTTTTGATAAAAGTCTTGCAATTGCTTCTCCCTTTGTTGATCGCGGGCCTAGCATATTCACTGCCATACTTTCGCACAAAAGTGTGA 411 44.04 MGSNGKVYSFDEVAKHNHRKDCWIVISGKVYNVTSFLEEHPGGDEVLLLAVEKDATDDFEDVGHSESAKQLLENYYVGKVDTATLPEKPNYRPTPTTESASESKKSYGVLIKVLQLLLPLLIAGLAYSLPYFRTKV 136
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7305465 7306387 + Conep18aG0102300.1 Cone18ag0994 457955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag0994 136 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cone18ag0994 136 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cone18ag0994 136 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cone18ag0994 136 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cone18ag0994 136 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cone18ag0994 136 FunFam Cytochrome b5 type B 2 85 - -
Cone18ag0994 136 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 80 IPR001199 -
Cone18ag0994 136 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cone18ag0994 136 PANTHER CYTOCHROME B5 4 119 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cone18ag0994 136 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 90 IPR036400 -
Cone18ag0994 136 Gene3D - 2 84 IPR036400 -
Cone18ag0994 136 SMART Cyt_b5_2 8 81 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0449 Cone-Chr14:2102538 Cone18ag0994 Cone-Chr18:7305465 7.82E-63 dispersed
Cone15ag0479 Cone-Chr15:2260879 Cone18ag0994 Cone-Chr18:7305465 8.28E-58 dispersed
Cone18ag0994 Cone-Chr18:7305465 Cone4ag0397 Cone-Chr4:1806930 5.07E-45 dispersed
Cone1ag1008 Cone-Chr1:55070293 Cone18ag0994 Cone-Chr18:7305465 5.18E-46 wgd
Cone18ag0994 Cone-Chr18:7305465 Cone5ag0716 Cone-Chr5:3082824 1.52E-29 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag0994 K23490 - mdm:103424638 182.956