Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone18ag0995 | ATGACTGCTACTTCCAACGTAGAAAGCCTCTGGCTTTTCGCCCTAGCCTCTAAATTTGAAAACATAACTCGAGAAAACATCCTACTCTCATTCTTAATCATCGCCTTCACGTGGCTAACCGTAAATCTCATCTTCTGGGCTCACCCAAGAGGCCCAGCATGGGGCAGGAGCTGGTGGGCCAACAAGCGTCCGAATAATAATATAATCCCAGGCCCAAGAGGCTTCCCCCTGATTGGAAGCATGAACCTCATGGTAAACTTAGCCCACCGCCGTATTGCCGCCATGGCTCAATCTCTCAACGCCAGCCGTCTCATGGCCTTCAGCCTCGGAACCACTCGCGTCATTGTGACGTGTAATCCTGATGTGGCGAAAGAGATCCTCAACAGTTCGGTTTTTGCTGACCGTCCGATCAAGGAGTCTGCTTACGGCTTGATGTTCAACCGTGCCATCGGGTTCGCATCGTACGGTGTTTATTGGCGGACTCTGAGGAGAATCTCGTCAAATCATCTCTTCTGTCCAAAACAGATTACCGCTTCTGAGTGTTCGAGGAGATTAATAGTTTCGGAAATGGTTGGAATCTTTAAACAAGAAGAGGATTGCTTCCCTGTTCGGAGTGTACTAAAACGGGGTTCTCTGAACCACATGATGAGCTCCGTTTTCGGAAAATCTTACCCGTTGGATTCGAATACTAATTACGAGGTTGATGAATTAAGAGAGCTTGTCGACGAAGGGTATGATCTTTTGGGTTTGTTAAACTGGTCAGACCATCTTCCGGTTTTGGCCGATTTCGATATTCAAAGAATCCGGTTCAGATGCTCCAAACTTGTACCCAAAGTGACCCGGTTCGTCGGACGAGTTATCGCTGAACACCGAGCTGCTCAAACCGGACCAGACGGGCCAAAAGATTTCGTTAATGTGTTGCTTTCTCTACAAGGAGAGAATAAACTATCTGATTCCGATATGATCGCTGTTCTTTGGGAAATGATATTCAGGGGAACTGACACAGTGGCGGTTTTGATCGAGTGGGTCCTAGCGAGGATGGTGCTTCATCTTGAAGTCCAATCAAAGGTACATGATGAGTTAGATAAGGTTGTCGGAAGATCACGCGCCGTGACTGAATCCGATCTTCCGTCTCTGAGCTATTTGACGGCTGTGATTAAGGAGGTTTTGAGGCTACACCCGCCGGGCCCACTCCTCTCATGGGCCCGTTTGGCTATCACTGATACGATTGTTGATGGGTATCATGTGCCCAAAGGGACCACAGCGATGGTGAATATGTGGTCTATTGCAAGGGACCCACTTATTTGGGCGGATCCATTGGAATTTATGCCTGATAGGTTTGTATCCCAAGAATCTGGACACGTGGAGTTTTCGATTATGGGCTCGGATCTAAGGCTTGCTCCCTTCGGGTCGGGTCGCAGGATTTGTCCGGGAAAGAATCTGGGGTTGACTACGGTTAGTTTCTGGGTGGCGTCGCTTTTGCATGAGTTTAAATGGTTACCGTCGGATGAGAATGCGATTGACTTATCTGAAGTTTTAAAGTTGTCTTGTGAAATGGCCAACCCTCTGACCGTAAAAGTACGTGGCAGGCGCAGTTAA | 1599 | 48.09 | MTATSNVESLWLFALASKFENITRENILLSFLIIAFTWLTVNLIFWAHPRGPAWGRSWWANKRPNNNIIPGPRGFPLIGSMNLMVNLAHRRIAAMAQSLNASRLMAFSLGTTRVIVTCNPDVAKEILNSSVFADRPIKESAYGLMFNRAIGFASYGVYWRTLRRISSNHLFCPKQITASECSRRLIVSEMVGIFKQEEDCFPVRSVLKRGSLNHMMSSVFGKSYPLDSNTNYEVDELRELVDEGYDLLGLLNWSDHLPVLADFDIQRIRFRCSKLVPKVTRFVGRVIAEHRAAQTGPDGPKDFVNVLLSLQGENKLSDSDMIAVLWEMIFRGTDTVAVLIEWVLARMVLHLEVQSKVHDELDKVVGRSRAVTESDLPSLSYLTAVIKEVLRLHPPGPLLSWARLAITDTIVDGYHVPKGTTAMVNMWSIARDPLIWADPLEFMPDRFVSQESGHVEFSIMGSDLRLAPFGSGRRICPGKNLGLTTVSFWVASLLHEFKWLPSDENAIDLSEVLKLSCEMANPLTVKVRGRRS | 532 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 7308166 | 7309926 | - | Conep18aG0102400.1 | Cone18ag0995 | 457956 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone18ag0995 | 532 | SUPERFAMILY | Cytochrome P450 | 69 | 530 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0995 | 532 | Pfam | Cytochrome P450 | 70 | 508 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0995 | 532 | PRINTS | E-class P450 group I signature | 476 | 499 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0995 | 532 | PRINTS | E-class P450 group I signature | 383 | 401 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0995 | 532 | PRINTS | E-class P450 group I signature | 425 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0995 | 532 | PRINTS | E-class P450 group I signature | 466 | 476 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0995 | 532 | PRINTS | E-class P450 group I signature | 340 | 366 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0995 | 532 | PRINTS | E-class P450 group I signature | 320 | 337 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0995 | 532 | FunFam | Cytochrome P450 78A5 | 61 | 530 | - | - | |
| Cone18ag0995 | 532 | Gene3D | Cytochrome P450 | 56 | 531 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0995 | 532 | CDD | CYP78 | 100 | 523 | - | - | |
| Cone18ag0995 | 532 | PANTHER | CYTOCHROME P450 78A7-RELATED | 2 | 527 | IPR051996 | - | |
| Cone18ag0995 | 532 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 469 | 478 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone18ag0995 | 532 | PRINTS | P450 superfamily signature | 467 | 476 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0995 | 532 | PRINTS | P450 superfamily signature | 331 | 348 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0995 | 532 | PRINTS | P450 superfamily signature | 384 | 395 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag0995 | 532 | PRINTS | P450 superfamily signature | 476 | 487 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone18ag0995 | Cone-Chr18:7308166 | Cone6ag0519 | Cone-Chr6:2591809 | 1.91E-173 | dispersed | |
| Cone11ag0515 | Cone-Chr11:2677425 | Cone18ag0995 | Cone-Chr18:7308166 | 0 | wgd | |
| Cone14ag0450 | Cone-Chr14:2111433 | Cone18ag0995 | Cone-Chr18:7308166 | 2.63E-280 | wgd | |
| Cone15ag0480 | Cone-Chr15:2267032 | Cone18ag0995 | Cone-Chr18:7308166 | 1.04E-268 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone18ag0995 | K20619 | - | cit:102613914 | 756.518 |