Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone18ag1061 | ATGGAAGGTGGCGATAATTGGGATCTCCACGCGGTGGTCAGAGGTTGTTGCTCCACCACCACCACCACCAACGCAACAACCGCCGCCGCCGCCACTATCTCCCCTTCTTTCACCGATCAATCAATTTTCTTAGCTGATTTTGACGTTGATGATGTAAGTAATAAATACTCTTCTTATAGTGACCATTTTAATTTCTCTCTCCAACAACAAGAACTACCACCCTTTGAAGAGAAGAACACTAATACCTTTGATCAGGAATTGCATGAGCTTTTCAGGCCCTTCTTCACCCTGTCTGCCAGATCTCCACCGCCACAGTCGCCTCAGTATCAGCAGCCTCAGCCACCGCCTCCTCTTCCTCCTCCTTCTCTATCTAATGTTCTTCAAATTACACAACAAAAACCTCTTCATCAAGTACTTAAGCAACAGTCTCATCCTCCCTCTCATGTCAATATACCAAGATCCAAACGAAGAAAGAACCAGCAAAAGACGGTATGTCAGGTACCGGCCGAGAATCTCTCTTCCGACATCTGGGCTTGGCGTAAATACGGTCAAAAACCCATCAAAGGCTCGCCTTATCCAAGGGGGTATTATAGGTGTAGCAGCTCAAAGGGGTGTTTAGCTCGGAAACAAGTGGAGCGGAGCAGATCCGACCCCGGAATTTTCATCGTGACCTATACAGCGGAGCACAACCATCCTGCGCCGACGCACCGGAACTCTCTCGCCGGTTCGACTCGTCAAAAGTCATCTTTCACAGCCGGCCAGACAGTCACTGTTGCAGGTGACGGAAGCAAATCTCAACCCCGAGATGTTCCGATTAGTGGCCCCTCCTCCTCCTCCTCGCCTTCTTTGGAGCTGGAAGACGATCAAGTTTTCATGCCTCAGATGATGATCGGTACGACCTGTGTGGTGGAGTGCAAGGAGGAGGAGAAGGAAGATTGGGGAGAAGAGGAGTTAGGGTTAGAAGACGACGATGAATTTGGAATATCGGAGATGCAGGTGGCTGTCGCCGGAGATGATAATTTGCTTGTGGATTGTTTTGAGGTTGATCAGGTGCTGGACGGGACAACGCGGCCGGAGGCGTCTGCTGAATGCTTTCCCGATCTGTTTCCTCCGAGTTTTGGTGGCCTTTCTTGGACCGTTAACAATGCCGCCACCGCCGCTGGTGGAATCTGA | 1173 | 50.3 | MEGGDNWDLHAVVRGCCSTTTTTNATTAAAATISPSFTDQSIFLADFDVDDVSNKYSSYSDHFNFSLQQQELPPFEEKNTNTFDQELHELFRPFFTLSARSPPPQSPQYQQPQPPPPLPPPSLSNVLQITQQKPLHQVLKQQSHPPSHVNIPRSKRRKNQQKTVCQVPAENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERSRSDPGIFIVTYTAEHNHPAPTHRNSLAGSTRQKSSFTAGQTVTVAGDGSKSQPRDVPISGPSSSSSPSLELEDDQVFMPQMMIGTTCVVECKEEEKEDWGEEELGLEDDDEFGISEMQVAVAGDDNLLVDCFEVDQVLDGTTRPEASAECFPDLFPPSFGGLSWTVNNAATAAGGI | 390 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 7777622 | 7779360 | - | Conep18aG0109400.1 | Cone18ag1061 | 458022 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone18ag1061 | 390 | SMART | WRKY_cls | 173 | 233 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone18ag1061 | 390 | SUPERFAMILY | WRKY DNA-binding domain | 170 | 234 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone18ag1061 | 390 | MobiDBLite | consensus disorder prediction | 97 | 166 | - | - | |
Cone18ag1061 | 390 | Pfam | WRKY DNA -binding domain | 175 | 232 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone18ag1061 | 390 | MobiDBLite | consensus disorder prediction | 226 | 284 | - | - | |
Cone18ag1061 | 390 | Gene3D | WRKY domain | 157 | 227 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone18ag1061 | 390 | MobiDBLite | consensus disorder prediction | 124 | 149 | - | - | |
Cone18ag1061 | 390 | FunFam | WRKY transcription factor 22 | 156 | 227 | - | - | |
Cone18ag1061 | 390 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 7 | 326 | IPR044810 | GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone18ag1061 | 390 | ProSiteProfiles | WRKY domain profile. | 168 | 234 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone18ag1061 | 390 | MobiDBLite | consensus disorder prediction | 105 | 123 | - | - | |
Cone18ag1061 | 390 | MobiDBLite | consensus disorder prediction | 231 | 262 | - | - | |
Cone18ag1061 | 390 | MobiDBLite | consensus disorder prediction | 269 | 284 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag1061 | Cone-Chr18:7777622 | Cone6ag1143 | Cone-Chr6:8641222 | 1.77E-40 | dispersed | |
Cone11ag0447 | Cone-Chr11:2253478 | Cone18ag1061 | Cone-Chr18:7777622 | 1.12E-204 | wgd | |
Cone14ag0050 | Cone-Chr14:312009 | Cone18ag1061 | Cone-Chr18:7777622 | 1.77E-48 | wgd | |
Cone14ag0387 | Cone-Chr14:1810039 | Cone18ag1061 | Cone-Chr18:7777622 | 3.15E-61 | wgd | |
Cone15ag0055 | Cone-Chr15:335860 | Cone18ag1061 | Cone-Chr18:7777622 | 3.35E-47 | wgd | |
Cone15ag0424 | Cone-Chr15:2001244 | Cone18ag1061 | Cone-Chr18:7777622 | 1.23E-59 | wgd | |
Cone18ag1061 | Cone-Chr18:7777622 | Cone6ag0812 | Cone-Chr6:4127490 | 2.30E-41 | wgd | |
Cone18ag1061 | Cone-Chr18:7777622 | Cone9ag0811 | Cone-Chr9:3902804 | 4.63E-39 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45215 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone18ag1061 | K13425 | - | vvi:100256849 | 259.225 |