Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1094 ATGGATTTAACGTGTGGTTTGAGACAGCCAAATTTTTTAAGTGGAGGTGAACGAACGAGCTATAAAGCATTGAACCATTTTGTTTCACAGAATGGGTTCAATAGAAGCAGAGTTGGTAATTCTATGTTTCTTGGCAGTTCACGAATTGTTTCTAAAGCAAGTTTGACTAAGAAGATGAAGAGGATAATAGCTTCTAATGGTTCTAGGAACTCGGGCCTGATTTCTAATCAAGAGTTTGACAGCCATTTATGGATTGCAAATCCGAGAAGATATTTCAGTTGTAATTTTGGTAGTTCTTTCAAGATATCGAGGGTGGTTCACTCACAGTGCCAGAGTAATGATTCTTTAGCATTTATTGATGGGAATGGGCGAAATGTAGAACTCATTGATGGTCATGGAGATAGCTTGGGAGTGGGACCTATTGATGATTCCCAATCAATAGGTTCTGTTGAAAATGATGGAAAACAAGAAGGAGAGGGAGAATCATCAAGCGTGGAAGAGTTGAAAGAATTGCTGCAGAAGGCCATGAAAGAATTGGAAGCTGCAAGGCTCAACAGTGCTGTATTTGAGGAAAAGGCTCAAGAAATATCTGAAGCTGCAATTGCTTTGCGAGATGAAGCAACAATTGCTTGGGCTGATGTGAACTCTACTCTTGATGCTATTCAACAGATAGTTAATGAAGAAAACTTTGCCAAAGAAGCTGTGCAGAAAGCAACAATGGCTCTTTCATTAGCAGAGGCAAGGCTTCAGGTCATGGTAGAAGAAGGAGAGCATTCTAGAGAAGATTCAAGAAATGCAGATGGTGAGTATGGTATTAAGGAGGAGGAAGATGGTCTGTTAGTTGCTCAAGAGGGCATGAGGGAATGTCAGGAGAACCTGGCAACATGTGAGGCAGAGCTGATCCGCTTACAGACTAGAAAAGGGGAGTTAAAGAAGGAAGTGGACAGGTTGAATGATCTTGCTGAAAAAGCACAGCTGAATTCCTTGAAAGCTGAGGAGGATGTGACAAACATAATGCTTTTAGCTGAGCAAGCTGTTGCTTTTGAACTTGAAGCTGCACAACGGGTCAGTGATGCAGAAATTGCTCTACAGAAAGCAGATAGATCTCTATCTACTTCTTCTATTGACATCAAAGAAACCGCACAAAGGCAAGACTTTAATGATGAGAGTCTTTTTGAGGAGGAGAGACTGGCTCAAGGGGTTTCTAGTGACATCATATTGGAAAGGGCTGGAGATTTGCCAATAGTCAGTGATTCTTTGGCTGTCAAACCTTTACCAGATAGCTTCTCTGATTTAGAGGATTTGAATCAATCTAATGACTTAAGTGACCATGAGAAAGGAAAATTGAATTTAGACTCTGCTAGAGATGCTGAATTCGAATCAGAAAAGCCAAAGAATGTGAGTCAGACAAAAAAGCAGGAAACTCAGAAGGATTTGACTAGAGAAAACTCCCCGTTAAGTGGTCCTAAGGCATTGTTGAACAAATCTTCTCGCTTCTTTTCTGCATCATTCTTTTCTTTTACTGTTGATGGGACTGAGCTCACGCTAGCATCAGTTGCTCAGGGTCTTATGGAGTCTGCTTGGAATCAATTGCCTAAGCTAATCTTTGGGTTATTACTATTAGGAGCAGGGGCCACCTTTTATGTGACTCGAGCTGAAAGGAATTCTCTGCTGTTGCAACAGCCCGATGTTATTACCGCTAGCTTTGAAGAAGTTTCCTCAAATGCGAAGCCTCTGCTTCAAAAATTAAGGAGACTTCCTAAGAGAGTTGAAAAATTGATTGCAATGATTCCTCATCAAGAGGTGAATGAGGAGGAAGCTTCTCTTTTTGACATGTTGTGGCTATTGCTTGCTAGTGTTATATTTGTGCCCATGTTCCAGAAAATTCCCGGAGGCAGTCCTGTTCTTGGGTACTTGGCTGCTGGCATCTTGATTGGGCCTTATGGTCTCTCCATTATTCGTCACGTGCATGGGACAAAAGCAATTGCTGAATTTGGAGTTGTTTTCTTATTGTTCAATATTGGCCTTGAGCTCTCAGTTGAACGGCTGAGTTCCATGAAGAAATATGTTTTTGGGTTAGGCTCTGCTCAGGTTTTGGTTACAGCAGCAGCAGTTGGCTGTATTACTCATTTTGTCTGTGGGCAGGCTGGTCCTGCTGCAATAGTAATTGGGAATGGCCTAGCTTTATCATCCACTGCTGTAGTGCTACAGGTGTTACAAGAGCGAGGTGAGAGCACATCTCGGCATGGACGTGCTACATTTTCTGTCCTACTATTCCAGGATTTGGCTGTTGTGGTTTTGTTAATACTCATACCTCTTATTTCACCGAATTCGTCAAAAGGAGGGATTGGTTTTCAAGCTATTGCTGAAGCTCTTGGATTGGCTGCTGTTAAGGCGGCCGTTGCCATCACTGCCATAATTGCTGGTGGGCGCTTGCTGCTTCGACCAATTTATAAGCAGATTGCCGAGAATCAAAATGCAGAGATATTCTCTGCCAACACACTCCTTGTTATTTTGGGGACTAGTCTACTTACAGCAAGGGCTGGACTGTCCATGGCGTTGGGTGCATTTTTAGCTGGTTTGCTACTCGCAGAAACAGAGTTTTCCTTGCAGGTTGAATCTGATATAGCTCCCTATCGTGGCCTTTTGTTAGGGCTTTTCTTCATGACGGTTGGAATGTCCATCGATCCAAAACTTCTTCTTTCAAACTTTCCAGTCATTATGGGGTCACTAGGAGTCCTAATTGTTGGCAAGACCATGTTGGTTGCTTTAGTTGGCAAGCTTTTTGGCATCTCAATTATATCTGCGGTACGAGTTGGTCTGCTTCTTGCTCCAGGTGGAGAGTTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGTATAATGTCTTCTCAACTGTCATCTTTGCTGTTTCTTGTGGTGGGAATTTCTATGGCCCTCACACCATATCTAGCGGCTGGAGGCCAATTGATTGCTTCTCGGTTTGAGCTGCATGATGTTCGGAGTTTGCTACCTGCCGAGAGTGAGACAGATGATTTGCAAGGCCATATAATTATATGTGGGTTTGGACGAGTTGGCCAGATAATAGCCCAGCTTCTTTCAGAACGACTGATACCCTTTGTTGCTCTTGATGTGAGAAGGTACCTAGCACTAATAAAACCGAGATGCATCTTTTAA 3180 42.7 MDLTCGLRQPNFLSGGERTSYKALNHFVSQNGFNRSRVGNSMFLGSSRIVSKASLTKKMKRIIASNGSRNSGLISNQEFDSHLWIANPRRYFSCNFGSSFKISRVVHSQCQSNDSLAFIDGNGRNVELIDGHGDSLGVGPIDDSQSIGSVENDGKQEGEGESSSVEELKELLQKAMKELEAARLNSAVFEEKAQEISEAAIALRDEATIAWADVNSTLDAIQQIVNEENFAKEAVQKATMALSLAEARLQVMVEEGEHSREDSRNADGEYGIKEEEDGLLVAQEGMRECQENLATCEAELIRLQTRKGELKKEVDRLNDLAEKAQLNSLKAEEDVTNIMLLAEQAVAFELEAAQRVSDAEIALQKADRSLSTSSIDIKETAQRQDFNDESLFEEERLAQGVSSDIILERAGDLPIVSDSLAVKPLPDSFSDLEDLNQSNDLSDHEKGKLNLDSARDAEFESEKPKNVSQTKKQETQKDLTRENSPLSGPKALLNKSSRFFSASFFSFTVDGTELTLASVAQGLMESAWNQLPKLIFGLLLLGAGATFYVTRAERNSLLLQQPDVITASFEEVSSNAKPLLQKLRRLPKRVEKLIAMIPHQEVNEEEASLFDMLWLLLASVIFVPMFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAAAVGCITHFVCGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLLSNFPVIMGSLGVLIVGKTMLVALVGKLFGISIISAVRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPYLAAGGQLIASRFELHDVRSLLPAESETDDLQGHIIICGFGRVGQIIAQLLSERLIPFVALDVRRYLALIKPRCIF 1059
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8008730 8016926 + Conep18aG0112700.1 Cone18ag1094 458055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1094 1059 Gene3D - 1001 1052 - -
Cone18ag1094 1059 MobiDBLite consensus disorder prediction 456 479 - -
Cone18ag1094 1059 Coils Coil 286 334 - -
Cone18ag1094 1059 Gene3D - 605 991 IPR038770 -
Cone18ag1094 1059 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 323 1047 - GO:0009507(PANTHER)|GO:0015386(PANTHER)|GO:0016020(PANTHER)
Cone18ag1094 1059 MobiDBLite consensus disorder prediction 456 489 - -
Cone18ag1094 1059 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 616 896 IPR004771 GO:0006812(InterPro)|GO:0008324(InterPro)|GO:0016020(InterPro)
Cone18ag1094 1059 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1014 1047 IPR036291 -
Cone18ag1094 1059 MobiDBLite consensus disorder prediction 139 164 - -
Cone18ag1094 1059 Coils Coil 162 192 - -
Cone18ag1094 1059 FunFam K(+) efflux antiporter 2 chloroplastic 605 991 - -
Cone18ag1094 1059 Pfam Sodium/hydrogen exchanger family 619 985 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1015 Cone-Chr12:8556218 Cone18ag1094 Cone-Chr18:8008730 8.84E-81 dispersed
Cone18ag1094 Cone-Chr18:8008730 Cone8ag1043 Cone-Chr8:9593958 2.49E-79 dispersed
Cone11ag0413 Cone-Chr11:2044628 Cone18ag1094 Cone-Chr18:8008730 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1094 K03455 - mdm:103406153 1352.42