Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone18ag1132 | ATGGACAACCTAATAGCACGCGGCGGCGGCCGGCCGGTACTGCCACCACAATTTCTCTCCGGCCTGCCAGATCTCCACCTCCACCCCCACCCCCACCACTACCAAAACCAACAACACCAACAAACCTCCGAAGAAGACGACGAACAAGCCGAAAGCCAGAACCGGAGCGGTGGAAGCAGCTTAAACCACCACCACAACAACTCTGACCAGCCCTCTAACGGACCGGACTCATCGACAAGGTCACCATCTTCTATCAGAAGGCCACGCGGCCGCCCGTCCGGTTCAAAAAACAAACCCAAACCGCCCATCATAATAACCCGAGACAGTCCCAACGCGCTCCGGTCCCACGTGATGGAAATCGCCAACGAATGTGACATCATGGAAAGCCTGACCACCTTCGCAAGGCGGAGGCAGAGAGGGGTTTGTATTCTAAGCGGGACAGGAACCGTGGCTAATGTTACTCTAAAGCAGCCGGCTTCGCCTGGTGCGGTGGTTACTTTACATGGAAGGTTTGAAATCTTATCGCTATCCGGTTCGTTTCTTCCGCCTCCAGCCCCGCCTGCCGCGTCGGGTTTGACGATATATCTGGCCGGAGGGCAAGGGCAGGTGTTGGGAGGGAGTGTGGTGGGACACCTTTTAGCGGCGGGGCCTGTAGTTGTTATGGCAGCTTCTTTTGGTAATGCCGCGTATGAGAGGTTGCCGCTTGAGGATGAAGAAATTGTTCCGGCCGGTACTGGCGGTGGTCCGGTGCTGGAAAACAGTCCGATCGGAGGACAGCAGCAGTTGTTGAATGGCGATAGCTCTAACGCGTCGTCTGGTTTGTTTCATGGGATGCCGCAAAATTTACTAAATGCACCTGATCAGGCATTCTGGACCACACCTCGTCCACCTTATTGA | 897 | 55.52 | MDNLIARGGGRPVLPPQFLSGLPDLHLHPHPHHYQNQQHQQTSEEDDEQAESQNRSGGSSLNHHHNNSDQPSNGPDSSTRSPSSIRRPRGRPSGSKNKPKPPIIITRDSPNALRSHVMEIANECDIMESLTTFARRRQRGVCILSGTGTVANVTLKQPASPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVLGGSVVGHLLAAGPVVVMAASFGNAAYERLPLEDEEIVPAGTGGGPVLENSPIGGQQQLLNGDSSNASSGLFHGMPQNLLNAPDQAFWTTPRPPY | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 8173667 | 8174563 | + | Conep18aG0116800.1 | Cone18ag1132 | 458093 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone18ag1132 | 298 | Gene3D | - | 113 | 241 | - | - | |
Cone18ag1132 | 298 | PIRSF | ESCAROLA | 22 | 295 | IPR014476 | GO:0003680(InterPro) | |
Cone18ag1132 | 298 | MobiDBLite | consensus disorder prediction | 53 | 90 | - | - | |
Cone18ag1132 | 298 | CDD | DUF296 | 114 | 225 | IPR005175 | - | |
Cone18ag1132 | 298 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 44 | 261 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER) | |
Cone18ag1132 | 298 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 114 | 225 | IPR005175 | - | |
Cone18ag1132 | 298 | ProSiteProfiles | PPC domain profile profile. | 110 | 247 | IPR005175 | - | |
Cone18ag1132 | 298 | MobiDBLite | consensus disorder prediction | 254 | 278 | - | - | |
Cone18ag1132 | 298 | MobiDBLite | consensus disorder prediction | 1 | 110 | - | - | |
Cone18ag1132 | 298 | MobiDBLite | consensus disorder prediction | 243 | 278 | - | - | |
Cone18ag1132 | 298 | FunFam | AT-hook motif nuclear-localized protein | 113 | 240 | - | - | |
Cone18ag1132 | 298 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 110 | 241 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag1132 | Cone-Chr18:8173667 | Cone8ag0353 | Cone-Chr8:2019529 | 1.14E-96 | dispersed | |
Cone11ag0388 | Cone-Chr11:1912189 | Cone18ag1132 | Cone-Chr18:8173667 | 1.60E-168 | wgd | |
Cone14ag0141 | Cone-Chr14:683830 | Cone18ag1132 | Cone-Chr18:8173667 | 1.80E-78 | wgd | |
Cone14ag0306 | Cone-Chr14:1406920 | Cone18ag1132 | Cone-Chr18:8173667 | 4.94E-18 | wgd | |
Cone15ag0149 | Cone-Chr15:720428 | Cone18ag1132 | Cone-Chr18:8173667 | 1.07E-75 | wgd | |
Cone15ag0333 | Cone-Chr15:1527904 | Cone18ag1132 | Cone-Chr18:8173667 | 5.13E-18 | wgd | |
Cone18ag1132 | Cone-Chr18:8173667 | Cone6ag0720 | Cone-Chr6:3625087 | 3.94E-21 | wgd | |
Cone18ag1132 | Cone-Chr18:8173667 | Cone9ag0724 | Cone-Chr9:3455326 | 1.41E-20 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone18ag1132 | - | - | - | 0.0 |