Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1144 ATGGCTGAATCTAGCTCGCGAGCTCACACGTTGGGCCAGACAGAGATTAATTGGGACAAGCTTGATAAGACTAAATTTTATGTCGTAGGAGCCGGTCTGTTTACAGGGGTCACAGTTGCTCTGTACCCTGTTTCCGTTGTGAAAACAAGGCTACAGGTTGCTACAAAGGAATCTGCTGAGAAAAATGCATTTTCTGTCATTAGAGGCATATTGAAAAATGATGGCATTCCTGGTCTCTACAGAGGATTTGGCACTGTAATAACTGGTGCTATTCCTGCCAGGATTATTTTTCTTACTGCTTTAGAGACCACAAAAGTGGGAGCCTTCAAGGCGCTTGAGCCGTTCAAATTTTCTGAACCTACTCAGGCAGCCATAGCAAATGGATTAGGTGGCATGGCAGCTTCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATCAGCCAAAAGTTAATGGTGCAAGGATACTCTGGCCATGCAAAATATAGTGGTGGTTTAGATGTTGCTCGTAAGGTCATAAAATCTGATGGCATTAAAGGTTTATATAGAGGATTTGGTTTATCCGTAATGACTTATTCACCATCTAGTGCTGTATGGTGGGCAAGTTATGGTTCAAGTCAACGGGTCATATGGAGGCTCTTAGATGATGGGAATAAGTCTGAAGAAGCAAACCCCCGTGATGGTAAAATAGTGTTAGTTCAAGCTGCTGGTGGGATAATCGCTGGTGCAACTGCATCCTGTATCACCACACCATTAGACACCATAAAGACACGCTTGCAGGTAATTGGTCACGAAAAGAAGAGCACTGCCAGGCAAGTAGTTAGAAGCTTAATTGCAGATGATGGATGGAAAGGATTTTACAAAGGATTGGGACCAAGATTTTTCAGCATGTCAGCATGGGGAACCTCAATGATATTGACCTACGAATATTTGAAACGCTTGTGTGCAACGAATTAA 960 42.6 MAESSSRAHTLGQTEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVATKESAEKNAFSVIRGILKNDGIPGLYRGFGTVITGAIPARIIFLTALETTKVGAFKALEPFKFSEPTQAAIANGLGGMAASLFSQAVFVPIDVISQKLMVQGYSGHAKYSGGLDVARKVIKSDGIKGLYRGFGLSVMTYSPSSAVWWASYGSSQRVIWRLLDDGNKSEEANPRDGKIVLVQAAGGIIAGATASCITTPLDTIKTRLQVIGHEKKSTARQVVRSLIADDGWKGFYKGLGPRFFSMSAWGTSMILTYEYLKRLCATN 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8246994 8249856 - Conep18aG0118200.1 Cone18ag1144 458105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1144 319 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085(InterPro)
Cone18ag1144 319 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085(InterPro)
Cone18ag1144 319 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085(InterPro)
Cone18ag1144 319 FunFam Mitochondrial substrate carrier family protein 27 319 - -
Cone18ag1144 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 315 IPR018108 -
Cone18ag1144 319 Gene3D Mitochondrial carrier domain 27 319 IPR023395 -
Cone18ag1144 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Cone18ag1144 319 Pfam Mitochondrial carrier protein 31 106 IPR018108 -
Cone18ag1144 319 Pfam Mitochondrial carrier protein 234 316 IPR018108 -
Cone18ag1144 319 Pfam Mitochondrial carrier protein 124 211 IPR018108 -
Cone18ag1144 319 SUPERFAMILY Mitochondrial carrier 19 312 IPR023395 -
Cone18ag1144 319 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 9 318 - -
Cone18ag1144 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 107 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag1144 Cone-Chr18:8246994 Cone7ag1234 Cone-Chr7:9152009 4.52E-87 dispersed
Cone15ag0699 Cone-Chr15:3802527 Cone18ag1144 Cone-Chr18:8246994 2.28E-102 transposed
Cone11ag0356 Cone-Chr11:1743377 Cone18ag1144 Cone-Chr18:8246994 4.11E-222 wgd
Cone18ag1144 Cone-Chr18:8246994 Cone6ag0430 Cone-Chr6:2086342 1.20E-12 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1144 K15121 - rcu:8260256 520.776