Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1145 ATGCGCAAATCTCTTCGCCTAGGTAATCCAGTAACTAGTGGCAATTGCACCTTGCTGCTGCAGCATCCGAGGCAATTCGAGTCGAAAATCATTATGAGAATCTTCATCTCCATTATCTTCTTTCTCTTCATCTTCTCTAATCATGCAGCTGCATATGATCCGTTGGATCCAACCGGGAACATAACGATTAAGTGGGATATTATGTCGTGGACGCCGGACGGTTATGTGGTTAGCAGTGGTAACTATGAACAATTTTCAAATGTACCGGCACATAATGAGCCCGGGTTGGACCTTAGGGTGGACGTGGGCCAAGAAATAAGTGATATGGTCCATGGTGAGTGTTGGCAAGCCGGCACCTCGAACAAGACAGTTAAGCTTCCTAAGAAGTTCACTTTGCTTGGGCCGGGACCGGGATACGCTTGTGGTCCGACTAAAGTTGTGCCTTCCACCGCTTTTCTCACCCCAGATCGCCGACGCAAAACTCAGGCACTGATGACATGGAATGTGACATGCACATATTCACAGTTCCTGGCCAGAAAGAACCCAGGTTGTTGTGTCTCCTTCTCATCTTTCTACAATGACACTATCACTCCTTGCCCTTCCTGTGCTTGTGGATGCCGAGCCAAAGACACTTGTGTCAAGAGTGATTCTCACCTTCTGAAAATGGTGGGAGTAAACACTCCCAGAAAAGACAACGCCCCATTGCTCCAATGCACACATGACATGTGTCCGGTTAGGGTTCATTGGCGTGTGAAGGTCAACTACAAGGACTATTGGCGTGTTAAGATTTCCATCACAAACTTCAATTACCGCATGAACTACACCCGGTGGAGTCTTGTCATTCAGCATCCAAATCTCAACAATGTCACTCAAGTTTTCAGCTTTGATTACAAGCCCCTTGTCCCCTACCAATCCATAAATGATACCGGGATGTTTTACGGGATAAAATACTACAGCGACTTGCTTATGGAAGCTGGACCATTTGGAAATGTTCAATCCGAAGTGCTACTTCAAAAGGACAAGAAAACTTTCACGTTCAAGAAAGGATGGGCTTTTCCGACGAAGGTTTACTTCAATGGCGATGAATGCATGCTGCCGCCGCCACCCATTTCTACCCAATTCTGCTATAATGCACGTCTCTTTGCTTTCTCTACTATTACTATTACTACTACTACTCTATTTGCTTCAATATTGCTTGTTTTCTTATTAGGGCTTTTTTGA 1221 45.29 MRKSLRLGNPVTSGNCTLLLQHPRQFESKIIMRIFISIIFFLFIFSNHAAAYDPLDPTGNITIKWDIMSWTPDGYVVSSGNYEQFSNVPAHNEPGLDLRVDVGQEISDMVHGECWQAGTSNKTVKLPKKFTLLGPGPGYACGPTKVVPSTAFLTPDRRRKTQALMTWNVTCTYSQFLARKNPGCCVSFSSFYNDTITPCPSCACGCRAKDTCVKSDSHLLKMVGVNTPRKDNAPLLQCTHDMCPVRVHWRVKVNYKDYWRVKISITNFNYRMNYTRWSLVIQHPNLNNVTQVFSFDYKPLVPYQSINDTGMFYGIKYYSDLLMEAGPFGNVQSEVLLQKDKKTFTFKKGWAFPTKVYFNGDECMLPPPPISTQFCYNARLFAFSTITITTTTLFASILLVFLLGLF 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8250218 8252437 - Conep18aG0118300.1 Cone18ag1145 458106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1145 406 PANTHER PROTEIN COBRA 36 98 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Cone18ag1145 406 PIRSF COBRA 24 114 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cone18ag1145 406 PIRSF COBRA 97 405 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cone18ag1145 406 Pfam COBRA-like protein 119 174 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0028 Cone-Chr13:177797 Cone18ag1145 Cone-Chr18:8250218 2.60E-172 dispersed
Cone18ag1145 Cone-Chr18:8250218 Cone19ag0037 Cone-Chr19:253809 5.36E-141 dispersed
Cone11ag0355 Cone-Chr11:1740982 Cone18ag1145 Cone-Chr18:8250218 3.57E-218 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1145 - - - 0.0