Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1166 ATGTCACCAACCGATTCTTCACGGGAGGAAAATGTTTACATGGCCAAGTTGGCTGAACAGGCTGAGCGCTATGAGGAAATGGTCGAGTTTATGGAAAAGGTTGTGAAGACAGTAGATGTCGAGGAACTAACTGTGGAGGAAAGGAACCTCCTCTCTGTGGCTTATAAGAATGTGATTGGGGCTAGGAGAGCTTCATGGAGGATCATCTCTTCCATTGAGCAGAAGGAGGAGAGCAGGGGAAATGAGGACCATGTCTCAATCATCAAGGAGTACAGAGGAAAGATCGAAACTGAACTGAGCAAGATCTGTGATGGAATCTTGAACCTTCTGGAATCGCATCTGATCCCATCTGCCTCATCTGCCGAGTCTAAGGTGTTTTACCTGAAGATGAAGGGTGATTATCATAGGTACTTGGCTGAATTTAAGACGGGGGCTGAGAGGAAGGAAGCTGCTGAAAGCACTTTGTTGGCTTACAAGTCTGCTCAGGACATTGCTCTTGCTGATCTAGCTCCCACTCACCCAATAAGGCTTGGACTTGCACTTAACTTCTCAGTGTTCTATTATGAAATCCTTAATTCACCTGATCGTGCTTGCAATCTTGCGAAACAGGCTTTTGATGAGGCAATTTCTGAGCTGGATACATTGGGTGAGGAATCATACAAAGATAGTACGTTGATCATGCAACTTCTCCGAGACAACCTCACACTCTGGACTTCTGACATCACGGATGATGTTGGGGACGAGGCGAAGGAAGCACCAAAACGTGAATCTGGCGAGGGACCTCATTGA 789 46.39 MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVVKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSIIKEYRGKIETELSKICDGILNLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDVGDEAKEAPKRESGEGPH 262
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8370951 8373909 + Conep18aG0120500.1 Cone18ag1166 458127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1166 262 SMART 1433_4 8 251 IPR023410 -
Cone18ag1166 262 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cone18ag1166 262 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cone18ag1166 262 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cone18ag1166 262 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cone18ag1166 262 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cone18ag1166 262 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Cone18ag1166 262 PANTHER 14-3-3 PROTEIN 7 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cone18ag1166 262 Coils Coil 14 34 - -
Cone18ag1166 262 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cone18ag1166 262 PIRSF 14-3-3 3 251 IPR000308 -
Cone18ag1166 262 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Cone18ag1166 262 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cone18ag1166 262 Gene3D - 1 250 IPR036815 -
Cone18ag1166 262 FunFam 14-3-3 protein epsilon 4 251 - -
Cone18ag1166 262 Pfam 14-3-3 protein 14 238 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1206 Cone-Chr17:8795615 Cone18ag1166 Cone-Chr18:8370951 8.03E-150 dispersed
Cone18ag1166 Cone-Chr18:8370951 Cone20ag0521 Cone-Chr20:2823921 1.16E-151 dispersed
Cone11ag0333 Cone-Chr11:1622365 Cone18ag1166 Cone-Chr18:8370951 1.09E-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1166 K06630 - rcu:8261199 484.567