Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1172 ATGGACCCTCGCCGGCCTTCCCGCTCCGTAATCGACCCTAAAGTCCGGCACGTCGGGTTCTTCGCTCCCGCAGCCCCGCCCAACCGTTCACATTCGGGTCCTCCCGACCCGATCTCATCATCCTCTTCCCCTCCGGTTTCCGACATCTCACCGTCCGGAAACTCCCTCTCTCCCGTTATGATTCCGCCGCCGCGCCACTCCTCCGAAAACTTACTCATCTCTTCCCGTCCGGTCCCCACCTCTCCCCTCCGTTGCGACTCTTTGACCGCCGGCCAGTGGAAAAATTTCCCGGCCTCTTCACCTACGTCGTCGTTTCCCAGCAAGACTTCTGGAAACTGGGAGTTATCAAACGGCCTCGTTCTATCGCCTCGTCGAGGACCTAGGGGTAATTTGGTAAAATCAGGGAATCTTGTTGCCTCGTCGTCACTTCCTAGTGGCGGATTCGATTTAACGGTGAAAGCGAGCAGCGTTCCAGCTAGCGGGCTAACTACAGTTTCTCAAGTGAATTTGCCTCCTGGTATCTCTGAGAAAGGTGGAGGAGAATCAATTGAAGTTCAAAGCAGCAAACCCGCAAGTTCAAAGCCATTGAAAGACAAAACCACTAAAGCTGAAAGGCGGTCCATTCAAGAAGCTCAACGTGCCGCGAAAGCTGCGTCAAAAGGTGAAGGAAGTAGTAAGCCAGCTGCTAAACCTGACAAGGCTGCAAAGCCCCCCCCTTCACAGAAGAATGACAGTGCTTCTGTGGCTGCTTCTGAGAAGAAGGGTAGCGATCGTGTTCCAGAAAAAGATAGGAAAAAAGACGCTCCACATCCACGCATGCAATATGATGATATGAGCCGGGTGGAAAAGGCAAAAAGGCGTTCTGTTGTAAAACAAACTGAAGCTAGAAAGAGAGTGGAGCTGTTTAGGCATTTGCCTCAGTATGAACACGGTACTCAGCTTCCTGATCTTGAAGCGAAGTTTTTCCAACTTGATCCTGTTCATCCGGCTGTTTACAAGGTTGGATTACAGTACTTATCAGGTGACATTTGTGGCGGCAATGCGCGTTGCATTGCAATGCTTCAAGCATTTCAAGAAGCCATTAAAGACTACAACACCCCACCTGAAAAAACTCTCACTAGAGACCTAACGGCAAAAATAAGCAGCTACGTCTCATTTCTTATTGAATGCAGACCCCTATCAGTCAGCATGGGAAATGCAATTCGGTTCCTAAAGGGTAGAATTGCCAAACTACCCTTGACCCTTTCCGAGTCCGATGCAAAACTCTCTCTCCACTCAGATACTGACCGATTCATAAACGAAAAGATCATACTTGCGGACAAGGTTATAGTCAAGCATGCAGTAACAAAAATCCGGGATGGTGATGTTCTTCTTACTTATGGGTCTGCCTCTGTAGTTGAAATGATATTAATTGAAGCCCATGAACTTGGGAAAAAGTTCCATGTTATTGTAGTAGATTCTCGTCCGAAGCTTGAAGGACAGCTTTTGCTGCGTAGATTGGTGGGAAAGGGTCTTAGCTGTACATATACTAACATAAACTCGGTTTCTTACATAATGCATGAAGTTACTAGGGTTTTTCTGGGTGCTTCTTCGGTTTTATCTAATGGAACGGTTTATTCGAGGGTTGGAACTGCTTGTGTTGCCATGGTTGCTCATGCTTTTCGGGTTCCGGTTTTAGTTTGCTGTGAAGCGTATAAATTTCACGAAAGGGTACAGCTTGATTCTATATGCTGTAACGAGCTTGGTGACCCGGATGCTATTTCAAATGTTTTGGGTGGAGAGGAGATTAGCCCTTTGGAGGGTTCTGCTAACAATGAAAACCTGACATTTTTGAATTTGATGTATGATGCAACTCCCATGGATTATATCTCAATGATAATCACAGATTACGGCATGCTACCACCAACGAGTGTTCCTGTGATTGTGCGAGAATACCTCCGAGAACATCTTTGGATTGGATAG 1962 47.15 MDPRRPSRSVIDPKVRHVGFFAPAAPPNRSHSGPPDPISSSSSPPVSDISPSGNSLSPVMIPPPRHSSENLLISSRPVPTSPLRCDSLTAGQWKNFPASSPTSSFPSKTSGNWELSNGLVLSPRRGPRGNLVKSGNLVASSSLPSGGFDLTVKASSVPASGLTTVSQVNLPPGISEKGGGESIEVQSSKPASSKPLKDKTTKAERRSIQEAQRAAKAASKGEGSSKPAAKPDKAAKPPPSQKNDSASVAASEKKGSDRVPEKDRKKDAPHPRMQYDDMSRVEKAKRRSVVKQTEARKRVELFRHLPQYEHGTQLPDLEAKFFQLDPVHPAVYKVGLQYLSGDICGGNARCIAMLQAFQEAIKDYNTPPEKTLTRDLTAKISSYVSFLIECRPLSVSMGNAIRFLKGRIAKLPLTLSESDAKLSLHSDTDRFINEKIILADKVIVKHAVTKIRDGDVLLTYGSASVVEMILIEAHELGKKFHVIVVDSRPKLEGQLLLRRLVGKGLSCTYTNINSVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVLVCCEAYKFHERVQLDSICCNELGDPDAISNVLGGEEISPLEGSANNENLTFLNLMYDATPMDYISMIITDYGMLPPTSVPVIVREYLREHLWIG 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8396216 8399926 + Conep18aG0121100.1 Cone18ag1172 458133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1172 653 MobiDBLite consensus disorder prediction 1 133 - -
Cone18ag1172 653 MobiDBLite consensus disorder prediction 158 290 - -
Cone18ag1172 653 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 50 649 - -
Cone18ag1172 653 MobiDBLite consensus disorder prediction 68 117 - -
Cone18ag1172 653 Pfam Initiation factor 2 subunit family 345 635 IPR000649 GO:0044237(InterPro)
Cone18ag1172 653 MobiDBLite consensus disorder prediction 254 290 - -
Cone18ag1172 653 SUPERFAMILY NagB/RpiA/CoA transferase-like 300 645 IPR037171 -
Cone18ag1172 653 MobiDBLite consensus disorder prediction 195 211 - -
Cone18ag1172 653 MobiDBLite consensus disorder prediction 42 56 - -
Cone18ag1172 653 Gene3D - 439 646 IPR042529 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0328 Cone-Chr11:1599476 Cone18ag1172 Cone-Chr18:8396216 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1172 K03680 - mdm:103442487 868.611