Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1173 ATGGCTCAGCTGACGGAGGTAGCGGAGGTCGATCGGCTTCGAACGGTTTCGTCGTTTCCAGGCGACGATACGGATTATGAGGATGCTACGCCTTTTCTTTCTCGAGGACTTAGTGATCCTACGGGGATTAATATCCAACAGATGCGACGGCGTGCCAGCGGCGGCGTAAAGCCTGGGCCGCCGAAGCGTCAGTTGTCTTTTAGCCGAGATATAGGCCATGCCGCTGCTGAGACCTATCTCATCACTCGGCTTACGTTTACTCTTCTCCGATACCTTGGGATAGGCTACCGATGGATTACAAGATTGACTGCCCTGGTTTGTTATGCTATGCTACTTATGCCTGGTTTTCTACGAGTTGCATACTATTATTTCTTTTCAAGCCAGGTACGACGGAGTATAGTTTATGGTGATCAACCAAGAAATAGGTTAGATTTGTATTTATCTAGAAATACTGATGGAGGAAAGCCAGTTGTAATATTTGTAACTGGTGGAGCCTGGATTATTGGGTACAAAGCATGGGGTTCTCTTTTAGGACTGCGTTTAGCAGAAAGGGACATCATAGTGGCCTGCATCGATTACAGGAATTTTCCCCAGGGTACGGTCAGTGATATGGTAAAAGATGCTTCTCAAGGGATCTCATTTGTCTGCAACAACATAGCTGATTATGGGGGTGATCCTAACAGAATCTATCTAACGGGGCAATCAGCTGGTGCACATATTTCTGCTTGTGCTCTCTTGGAGCAAGCAATTAAAGAATATGAGACGGAAAAGGACTTATCATGGAGTGTTTCTCAGATAAATGCTTATTTTGGCTTATCAGGATGTTACAACTTAACTAATTTAGTTGATCACTTCCATAACCGAGGATTATATCGCTCCCTCTTTCTAAGCATAATGGAAGGTGAAAAGTCGCTGCCGCTTTTTTCTCCTGAGGTTAGAATACAGGACCCAAGTGTCAGAGATGCTGCTTCTCTCTTGCCTCCTATTACACTTTTCCATGGAACTGCTGATTATTCTATACCACCAGATGCAAGTAAGACATTTGTGGATACTCTTCGAAAGGCCGGTGCACAAGCTGAACTCATTCTTTACAAGGGTAAAACTCATACAGATTTGTTTCTTCAGGATCCTTTGAGAGGGGGCAAGGATGATCTTTTCGACCATGTACTTTCTGTGATACATGCTGATGATAAAGAAGCTCTTGAGAAGGATGTGACAGCTCCTCCAAGAAGACGGCTCGTCCCAGAGCTATTGTTGAGTTTAGCACGAGTAATCAGTCCTTTCTGA 1287 44.52 MAQLTEVAEVDRLRTVSSFPGDDTDYEDATPFLSRGLSDPTGINIQQMRRRASGGVKPGPPKRQLSFSRDIGHAAAETYLITRLTFTLLRYLGIGYRWITRLTALVCYAMLLMPGFLRVAYYYFFSSQVRRSIVYGDQPRNRLDLYLSRNTDGGKPVVIFVTGGAWIIGYKAWGSLLGLRLAERDIIVACIDYRNFPQGTVSDMVKDASQGISFVCNNIADYGGDPNRIYLTGQSAGAHISACALLEQAIKEYETEKDLSWSVSQINAYFGLSGCYNLTNLVDHFHNRGLYRSLFLSIMEGEKSLPLFSPEVRIQDPSVRDAASLLPPITLFHGTADYSIPPDASKTFVDTLRKAGAQAELILYKGKTHTDLFLQDPLRGGKDDLFDHVLSVIHADDKEALEKDVTAPPRRRLVPELLLSLARVISPF 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8402498 8407593 - Conep18aG0121200.1 Cone18ag1173 458134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1173 428 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 125 377 - -
Cone18ag1173 428 Pfam BD-FAE 143 352 IPR049492 -
Cone18ag1173 428 SUPERFAMILY alpha/beta-Hydrolases 111 393 IPR029058 -
Cone18ag1173 428 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 58 394 IPR050300 GO:0016298(PANTHER)
Cone18ag1173 428 Gene3D alpha/beta hydrolase 124 377 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0326 Cone-Chr11:1592711 Cone18ag1173 Cone-Chr18:8402498 2.34E-283 wgd
Cone18ag1173 Cone-Chr18:8402498 Cone19ag0869 Cone-Chr19:6807475 2.74E-187 wgd
Cone18ag1173 Cone-Chr18:8402498 Cone6ag0481 Cone-Chr6:2385093 7.69E-88 wgd
Cone18ag1173 Cone-Chr18:8402498 Cone6ag0481 Cone-Chr6:2385093 7.69E-88 wgd
Cone18ag1173 Cone-Chr18:8402498 Cone9ag0493 Cone-Chr9:2361622 2.58E-174 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1173 K15889 - mdm:103442493 623.239