Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1215 ATGAAGCAATATCATGAACTCCAACTAAGACGACAAGTAGAGATGCTCTGTCTTCTTGTCGTTTTACCTCTAGCCTTCTCTGATCTCGCATCCGACAGAGCAACTCTTGTCGATTTTCGGGCATCCGTAGGTGGTCGGCCCCTCCTCGTATGGAACCTCTCCGACGCCACTCCATGCTCATGGGTTGGCGTCAACTGCACCAAAACAGGCGTTTACGAGCTCCGCCTTCCCGCCATGGGTCTTGCCGGCCACCTCCCTCTCGGACTCGGCAACCTGACTCAACTCCAAACACTCTCTCTCCGATTCAACTCGCTGTCCGGCCCACTCCCTGCCGATTTGTCCAACCTCCACAACCTACGCAACCTCTACTTACACGGCAACTCCTTCTCCGGCGAAATCCCGGATTTTCTCTCCATCCTTCAGAACTTAGTTCGGTTGAATTTAGCCAACAACAACTTCTCCGGCGAGATCCCGTTAGGGTTTAACAATCTCACGAGGTTAGCTACTCTCTACTTAGAAAGCAACCACCTTTCCGGCCCAATCCCTCTTCTAAACATACCCACTTTAATCCAATTCAATATCTCTTACAATCAGCTAAATGGGTCCGTCCCACTAAAGCTCTCTGTTTTCCCTGATACCGCTTTCGCCGGAAACTCCCTTTGCGGCCAGCCATTATCCCCCTGCATTAAACCCAAGAAGAAACTCTCCGGTGGAGCAATCGCCGGAATCGTGATCGGTGCTTTCTTTGGATTCATAATCTTACTCACCATTCTATTATTGTTGTGTAAGAAATCAAAGGGTGGTAGAGAAAATCAGAAATCAAGGTCGAAAGAGATCTCTCCGGCATTAACCGAAACGGCTAAGGACGGTCCTAGAGAAAAGGCAGTGGGGCCTGGTGAGGGGAGTAGTGATAGTATGAGTGTAGAGTACTCTGGTTTGGTTAAAGGGAGGCTCAAGAGTGGAATGAGTAAGAGCTTGGTTTTTATAGGGAATGCTCCTAAGGTGTTTGATTTGGAGGATTTGTTAAGAGCATCAGCAGAGGTGCTAGGGAAAGGCACGTTTGGGACGGCGTATAAGGCGACGCTCGAGGTGGGGGTGGCAATGGCTGTTAAGAGGCTTAAGGATGTGGTCGTTTCAGAGAGGGAGTTTAGGGACAAGATTGAAGAAGTGGGGAGGATGAATCATGAGAGCTTGGTCCCTCTTAGAGCTTATTACAACAATACTGATGAGAAGCTTCTGGTTTTTGATTACATGCCCATGGGAAGCCTATCAGCACTTTTACATGGGTGTGAGGCAGGAAGGACTCCATTGAATTGGGAAGCAAGGTCCGGAATAGCCCTAAGAGCGGCTCGCGGGATCAGCTACTTACACTCTCACATGATGTCCCATGGAAACATCAAATCATCCAACATCCTCCTCGACAAATCATTCCAAGGTTGTGTCTCGGACTTCGGCCTAGCCCAGCTGGCAAGCCCCGCATCAAGTCCTAACCGAATTGCAGGCTATCGGGCCCCAGAAGTAACTGACCCGCACAAGGTGTCTGAAAAGGCGGATGTCTATAGCTTCGGAGTTCTCCTTTTGGAGCTTCTAACCAGGCGGGCTCCAACTTACTCGCTATTGAACGAAGAAGGGGTTGACCTTCCGAGATGGGTCCAGTCCGTGGTCCACGAGGAGTGGACTTCCGAAGTGTTTGACATTGAGCTTCTTAGATACCAGAACGTAGAGGAAGAGATGGTGCAACTTTTACAGCTCGCTTTGCAATGTACGGCTCCTTACCCGGATAATCGGCCTTCGATGGATGAGGTGGTAGGAAGAATAGAGGAGATTTGTCGATCGAGCTTAGAGATCATGAATAGTTAG 1860 49.52 MKQYHELQLRRQVEMLCLLVVLPLAFSDLASDRATLVDFRASVGGRPLLVWNLSDATPCSWVGVNCTKTGVYELRLPAMGLAGHLPLGLGNLTQLQTLSLRFNSLSGPLPADLSNLHNLRNLYLHGNSFSGEIPDFLSILQNLVRLNLANNNFSGEIPLGFNNLTRLATLYLESNHLSGPIPLLNIPTLIQFNISYNQLNGSVPLKLSVFPDTAFAGNSLCGQPLSPCIKPKKKLSGGAIAGIVIGAFFGFIILLTILLLLCKKSKGGRENQKSRSKEISPALTETAKDGPREKAVGPGEGSSDSMSVEYSGLVKGRLKSGMSKSLVFIGNAPKVFDLEDLLRASAEVLGKGTFGTAYKATLEVGVAMAVKRLKDVVVSEREFRDKIEEVGRMNHESLVPLRAYYNNTDEKLLVFDYMPMGSLSALLHGCEAGRTPLNWEARSGIALRAARGISYLHSHMMSHGNIKSSNILLDKSFQGCVSDFGLAQLASPASSPNRIAGYRAPEVTDPHKVSEKADVYSFGVLLLELLTRRAPTYSLLNEEGVDLPRWVQSVVHEEWTSEVFDIELLRYQNVEEEMVQLLQLALQCTAPYPDNRPSMDEVVGRIEEICRSSLEIMNS 619
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8658053 8660829 + Conep18aG0125500.1 Cone18ag1215 458176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1215 619 FunFam Probable inactive receptor kinase RLK902 29 185 - -
Cone18ag1215 619 Gene3D Ribonuclease Inhibitor 140 228 IPR032675 -
Cone18ag1215 619 SUPERFAMILY Protein kinase-like (PK-like) 347 605 IPR011009 -
Cone18ag1215 619 ProSiteProfiles Protein kinase domain profile. 343 609 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag1215 619 SUPERFAMILY L domain-like 51 207 - -
Cone18ag1215 619 FunFam pollen receptor-like kinase 1 314 417 - -
Cone18ag1215 619 MobiDBLite consensus disorder prediction 269 307 - -
Cone18ag1215 619 Pfam Protein kinase domain 347 603 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag1215 619 Gene3D Transferase(Phosphotransferase) domain 1 418 615 - -
Cone18ag1215 619 Gene3D Ribonuclease Inhibitor 31 139 IPR032675 -
Cone18ag1215 619 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 418 618 - -
Cone18ag1215 619 Gene3D Phosphorylase Kinase; domain 1 312 417 - -
Cone18ag1215 619 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Cone18ag1215 619 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524(InterPro)
Cone18ag1215 619 PANTHER OS05G0588300 PROTEIN 17 610 IPR050994 -
Cone18ag1215 619 Pfam Leucine Rich Repeat 142 164 IPR001611 GO:0005515(InterPro)
Cone18ag1215 619 Pfam Leucine Rich Repeat 94 116 IPR001611 GO:0005515(InterPro)
Cone18ag1215 619 Pfam Leucine Rich Repeat 118 138 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0255 Cone-Chr16:2817920 Cone18ag1215 Cone-Chr18:8658053 2.59E-193 dispersed
Cone18ag1215 Cone-Chr18:8658053 Cone2ag0777 Cone-Chr2:33756899 2.50E-188 dispersed
Cone11ag0271 Cone-Chr11:1312509 Cone18ag1215 Cone-Chr18:8658053 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82346 PF06027 SLC35F 9.70E-91 CL0184 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1215 - - - 0.0