Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone18ag1268 | ATGATGGTTGATCAGACAGCGGCGATACAAGAAGCAGCCTATGCCGGCATGAAGAGCATGGAGCACCTGATCCAAATCCTGTTCCATCAACCGCCACCTCAGAGCTGCCGTCTTAACCGTCACCCGGAATTCACGGAAGTATCTGACGCCACCGTCGCCAAGTTTAAACAAGTTATCTCACTCTTAAACCGGACTGGCCACGCCCGGTTCCGCCGCGGACCCAGAAACACACCGGCACCGTCTGATTCTGATTCTCACCCATCCGACCCGGTTCACGACCTCTCTCGTCTTAACTTGGCCGGTTCGACTAAATCTTATCCCGATCATCAACCCAACCTGAATACAACTAAATCGTTGAAACGAAAGGCGTCTACTGAGTCAGAGACCGAGTTGTTGTCTATGACTCAGTACACAAAGGAGCTGGCATTTACCACGTCAGCAGCTCATAATTCTTCCTCTACGTCGTCGTTGTTCTCCTCGATTACTGGAGACAGCAGCGTTTCCAACGGAAAACTAGGTCCGTCTCTGTTTTTAGCACCGACGACAACCTTCTCCTCCGGTAAACCGCCTCTGTCGTTGACTCACAGGAAAAAGTGCCAAGAGCACGCCGTCTCCGGTAAAACTTCCTCCTCCGGCCGCTGCCACTGCTCCACGAGAAGAAAATTGAGGACGAAGAGGAGCATAAGAGTGCCGGCGATTAGTTCCAGGATCGCCGATATCCCCGCCGATGAATACTCGTGGAGAAAATACGGCCAAAAGCCGATCAAAGGTTCACCTTACCCACGAGCGTACTACAAGTGCAGTAGCATAAGAGGGTGTCCAGCAAGGAAACACGTGGAAAGGGCCCAAGATAACCCCACGATGCTCATCGTGACTTACGAAGGAGAGCACCGTCACGGCGGCCCACAGGCGGCGGCACAACCTGAGTCAGCTGCCGCCAATGGGTTTCTCTTACACAAGAGTTAA | 966 | 52.8 | MMVDQTAAIQEAAYAGMKSMEHLIQILFHQPPPQSCRLNRHPEFTEVSDATVAKFKQVISLLNRTGHARFRRGPRNTPAPSDSDSHPSDPVHDLSRLNLAGSTKSYPDHQPNLNTTKSLKRKASTESETELLSMTQYTKELAFTTSAAHNSSSTSSLFSSITGDSSVSNGKLGPSLFLAPTTTFSSGKPPLSLTHRKKCQEHAVSGKTSSSGRCHCSTRRKLRTKRSIRVPAISSRIADIPADEYSWRKYGQKPIKGSPYPRAYYKCSSIRGCPARKHVERAQDNPTMLIVTYEGEHRHGGPQAAAQPESAAANGFLLHKS | 321 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 8911535 | 8913040 | - | Conep18aG0130800.1 | Cone18ag1268 | 458229 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone18ag1268 | 321 | Pfam | Plant zinc cluster domain | 196 | 239 | IPR018872 | - | |
Cone18ag1268 | 321 | SUPERFAMILY | WRKY DNA-binding domain | 239 | 302 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone18ag1268 | 321 | Gene3D | WRKY domain | 231 | 303 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone18ag1268 | 321 | MobiDBLite | consensus disorder prediction | 66 | 131 | - | - | |
Cone18ag1268 | 321 | MobiDBLite | consensus disorder prediction | 298 | 321 | - | - | |
Cone18ag1268 | 321 | SMART | WRKY_cls | 241 | 301 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone18ag1268 | 321 | MobiDBLite | consensus disorder prediction | 98 | 120 | - | - | |
Cone18ag1268 | 321 | ProSiteProfiles | WRKY domain profile. | 236 | 302 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone18ag1268 | 321 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 8 | 304 | IPR044810 | GO:0003700(InterPro) | |
Cone18ag1268 | 321 | FunFam | WRKY transcription factor 65 | 225 | 302 | - | - | |
Cone18ag1268 | 321 | Pfam | WRKY DNA -binding domain | 243 | 299 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag1083 | Cone-Chr17:8073748 | Cone18ag1268 | Cone-Chr18:8911535 | 2.17E-82 | dispersed | |
Cone18ag1268 | Cone-Chr18:8911535 | Cone4ag1861 | Cone-Chr4:13342698 | 1.28E-88 | dispersed | |
Cone11ag0216 | Cone-Chr11:1074395 | Cone18ag1268 | Cone-Chr18:8911535 | 3.03E-194 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45237 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone18ag1268 | - | - | - | 0.0 |