Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone18ag1289 | ATGGGGATCACTCTTGAGGAGATAAAGAATGAAACTGTTGATCTGGAGAAAATTCCGATTGAGGAAGTGTTTGAGCAATTGAAATGTACTCGAGAAGGTCTATCAGCCCAGGAGGGAGAAAGTCGACTTCAGATCTTTGGCCCAAACAAGTTAGAAGAGAAAAAGGAAAGCAAGTTGCTGAAGTTTCTGGGTTTCATGTGGAATCCATTGTCATGGGTCATGGAAGCTGCCGCTATTATGGCAATTGCCTTGGCCAATGGAGGTGGGAAGCCACCAGATTGGCAGGACTTTGTAGGTATCGTCTGTCTCTTGGTCATTAACTCCACCATTAGTTTCATCGAAGAAAACAATGCTGGCAACGCTGCTGCTGCTCTCATGGCTGGTCTTGCGCCTAAAACTAAGGTGCTTAGAGACGGGCAATGGAAAGAGCAGGATGCTGCAATTCTTGTTCCAGGAGACATCATTAGCATCAAACTAGGAGACATTGTCCCTGCTGATGCTCGTCTCCTTGAAGGTGATCCTTTAAAGATTGATCAATCTGCGCTCACTGGAGAATCACTTCCTGTTACGAGAAACCCAGGAGATGAAGTTTTCTCTGGTTCAACCTGCAAACAAGGAGAACTTGAAGCTGTTGTGATTGCTACTGGAGTTCATACTTTCTTTGGAAAGGCAGCACATCTTGTTGACAGCACCAACCAAGTCGGACACTTCCAAAAGGTTCTTACTGCTATTGGGAATTTCTGTATCTGCTCCATTGCAGTCGGAATGCTCATTGAGATTGTAGTCATGTACCCGATTCAGCATCGTGAATATAGGAAGGGTATTGACAATCTTTTGGTCCTCTTGATCGGAGGAATCCCAATTGCCATGCCTACTGTCTTGTCAGTGACAATGGCTATTGGGTCTCACAAGTTATCCCAACAAGGTGCCATCACCAAGCGTATGACTGCCATTGAAGAAATGGCTGGCATGGATGTACTCTGCAGTGACAAGACAGGGACACTTACTCTCAACAAGCTTACTGTTGACAAAAACTTGATTGAGGTATTTGCCAAGGATGTGGACAAAGATCATGTGATGTTGCTTGCAGCAAGGGCTTCGAGAACTGAAAACCAAGATGCTATTGATGCTGCCATTGTGGGAACACTAGCAGACCCAAAGGAGGCTCGTGCTGGAATAAGAGAGGTGCACTTCTTCCCATTCAATCCTGTAGACAAGAGAACTGCTCTGACTTACATTGATTCAAATGGAAACTGGCATCGTGCTAGCAAAGGTGCTCCTGAGCAGATCTTGACTCTCTGCAACTGCAAGGAGGACTTCAAGAGAAAGGTTCATGCCATCATTGATAAGTTTGCTGAGCGTGGCCTTCGATCATTGGCAGTTGCTAGACAGGAAGTGCCTGAGAAAACTAAGGAAAGTTCTGGTGGTCCATGGCAATTTGTTGGTCTATTGTCCCTCTTCGATCCTCCAAGACACGACAGTGCTGATACCATCCGCAGGGCTCTTAACTTGGGTGTGAACGTCAAAATGATCACTGGCGATCAACTTGCCATTGCCAAGGAGACTGGCCGGAGACTTGGAATGGGTACAAACATGTACCCCTCTGCTTCTTTACTCGGTCAACACAAAGATGAGAGCATAGCTGGCCTTCCAGTTGAGGAATTGATCGAAAAGGCTGATGGGTTTGCTGGAGTTTTCCCAGAACACAAATACGAAATTGTGAAGAAGTTGCAAGAAAGCAAGCACATTTGTGGAATGACAGGAGATGGTGTGAATGATGCCCCTGCTTTGAAAAAGGCCGACATTGGTATTGCTGTGGCTGATGCTACAGATGCTGCACGAAGTGCTTCTGATATTGTTCTCACAGAGCCTGGACTGAGTGTCATCATCAGTGCAGTGCTTACCAGCAGAGCCATCTTCCAGAGAATGAAGAACTATACCATCTATGCAGTTTCCATTACAATCCGTATTGTGTTTGGCTTCATGCTTATTGCACTCATCTGGAAGTTTGATTTCTCGCCATTCATGGTTCTGATCATTGCTATTCTTAATGACGGTACAATCATGACCATCTCTAAGGATAGAGTGAAGCCATCTCCATTGCCTGATAGCTGGAAACTTAAAGAGATATTCGCTACCGGAGTCGTACTTGGAGGTTACTTGGCAATAATGACAGTCGTATTCTTTTGGATCATGAAGGAGACAGATTTCTTCTCAGATAAATTCGGAGTGAGATCCATTAGGGACAAGCCAGATGAAATGATGGCTGCTCTGTACCTACAAGTCAGTATTGTCAGCCAGGCTCTAATCTTCGTCACTCGTTCTCGTGGTTGGTCCTTCTATGAACGCCCCGGTCTACTTCTGATGGGCGCTTTCTTGATTGCACAACTGGTGGCGACTGTCATTGCAGTATATGCCAGCTGGGGTTTCGCAAGGATTGAAGGATGTGGATGGGGCTGGGCCGGAGTGATCTGGCTTTACAGCGTTGTGTTCTACTTCCCGCTTGACATAATGAAGTTTGCAATCCGTTACATCTTAAGTGGCAAGGCCTGGAATAACTTGCTTGAAAACAAGACTGCATTCACAACGAAGAAGGACTATGGAAAAGAAGAGAGGGAAGCCCAATGGGCCCATGCTCAAAGGACCCTCCATGGGCTTCAACCCCCACAAACATCCAACCTCTTCTCTGAAAAGAGCAGCTACAGAGAACTTTCTGAGATTGCAGAACAGGCCAAACGACGGGCAGAAGTTGCAAGGCTTAGGGAGCTGACTACACTAAAGGGTCACGTGGAGTCGGTGGTGAAGCTGAAGGGGCTGGACATTGATACGATTCAGCAGCATTACACCGTGTGA | 2853 | 46.23 | MGITLEEIKNETVDLEKIPIEEVFEQLKCTREGLSAQEGESRLQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGQWKEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTRNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLIEIVVMYPIQHREYRKGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKDVDKDHVMLLAARASRTENQDAIDAAIVGTLADPKEARAGIREVHFFPFNPVDKRTALTYIDSNGNWHRASKGAPEQILTLCNCKEDFKRKVHAIIDKFAERGLRSLAVARQEVPEKTKESSGGPWQFVGLLSLFDPPRHDSADTIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQHKDESIAGLPVEELIEKADGFAGVFPEHKYEIVKKLQESKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLAIMTVVFFWIMKETDFFSDKFGVRSIRDKPDEMMAALYLQVSIVSQALIFVTRSRGWSFYERPGLLLMGAFLIAQLVATVIAVYASWGFARIEGCGWGWAGVIWLYSVVFYFPLDIMKFAIRYILSGKAWNNLLENKTAFTTKKDYGKEEREAQWAHAQRTLHGLQPPQTSNLFSEKSSYRELSEIAEQAKRRAEVARLRELTTLKGHVESVVKLKGLDIDTIQQHYTV | 950 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 9012121 | 9019396 | + | Conep18aG0133100.1 | Cone18ag1289 | 458250 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone18ag1289 | 950 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 16 | 874 | - | GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER) | |
| Cone18ag1289 | 950 | Gene3D | - | 93 | 814 | - | - | |
| Cone18ag1289 | 950 | Gene3D | - | 340 | 487 | IPR023299 | GO:0000166(InterPro) | |
| Cone18ag1289 | 950 | FunFam | Plasma membrane ATPase | 340 | 487 | - | - | |
| Cone18ag1289 | 950 | Pfam | Cation transporter/ATPase, N-terminus | 17 | 80 | IPR004014 | - | |
| Cone18ag1289 | 950 | FunFam | Plasma membrane ATPase | 131 | 215 | - | - | |
| Cone18ag1289 | 950 | NCBIfam | plasma-membrane proton-efflux P-type ATPase | 33 | 805 | IPR006534 | GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro) | |
| Cone18ag1289 | 950 | Pfam | E1-E2 ATPase | 130 | 307 | - | - | |
| Cone18ag1289 | 950 | PRINTS | P-type cation-transporting ATPase superfamily signature | 482 | 493 | - | - | |
| Cone18ag1289 | 950 | PRINTS | P-type cation-transporting ATPase superfamily signature | 610 | 622 | - | - | |
| Cone18ag1289 | 950 | PRINTS | P-type cation-transporting ATPase superfamily signature | 504 | 514 | - | - | |
| Cone18ag1289 | 950 | PRINTS | P-type cation-transporting ATPase superfamily signature | 178 | 192 | - | - | |
| Cone18ag1289 | 950 | PRINTS | P-type cation-transporting ATPase superfamily signature | 328 | 342 | - | - | |
| Cone18ag1289 | 950 | PRINTS | P-type cation-transporting ATPase superfamily signature | 587 | 606 | - | - | |
| Cone18ag1289 | 950 | Pfam | haloacid dehalogenase-like hydrolase | 324 | 601 | - | - | |
| Cone18ag1289 | 950 | Coils | Coil | 901 | 921 | - | - | |
| Cone18ag1289 | 950 | Gene3D | - | 325 | 624 | IPR023214 | - | |
| Cone18ag1289 | 950 | CDD | P-type_ATPase_H | 33 | 840 | IPR006534 | GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro) | |
| Cone18ag1289 | 950 | NCBIfam | HAD-IC family P-type ATPase | 562 | 675 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone18ag1289 | 950 | NCBIfam | HAD-IC family P-type ATPase | 100 | 359 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone18ag1289 | 950 | SFLD | p-type atpase | 310 | 638 | IPR044492 | - | |
| Cone18ag1289 | 950 | Gene3D | - | 131 | 215 | - | - | |
| Cone18ag1289 | 950 | SUPERFAMILY | HAD-like | 324 | 634 | IPR036412 | - | |
| Cone18ag1289 | 950 | Gene3D | - | 899 | 950 | - | - | |
| Cone18ag1289 | 950 | FunFam | ATPase 4 plasma membrane-type | 586 | 814 | - | - | |
| Cone18ag1289 | 950 | SFLD | Haloacid Dehalogenase | 310 | 638 | - | - | |
| Cone18ag1289 | 950 | FunFam | Plasma membrane ATPase | 479 | 635 | - | - | |
| Cone18ag1289 | 950 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 14 | 846 | IPR023298 | - | |
| Cone18ag1289 | 950 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 330 | 336 | IPR018303 | - | |
| Cone18ag1289 | 950 | SMART | Cation_ATPase_N_a_2 | 14 | 86 | IPR004014 | - | |
| Cone18ag1289 | 950 | PRINTS | H+-transporting ATPase (proton pump) signature | 759 | 780 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone18ag1289 | 950 | PRINTS | H+-transporting ATPase (proton pump) signature | 587 | 603 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone18ag1289 | 950 | PRINTS | H+-transporting ATPase (proton pump) signature | 559 | 575 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone18ag1289 | 950 | PRINTS | H+-transporting ATPase (proton pump) signature | 618 | 643 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone18ag1289 | 950 | PRINTS | H+-transporting ATPase (proton pump) signature | 444 | 462 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cone18ag1289 | 950 | SUPERFAMILY | Calcium ATPase, transduction domain A | 131 | 228 | IPR008250 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone16ag0301 | Cone-Chr16:3467576 | Cone18ag1289 | Cone-Chr18:9012121 | 0 | dispersed | |
| Cone17ag0028 | Cone-Chr17:197752 | Cone18ag1289 | Cone-Chr18:9012121 | 3.09E-192 | dispersed | |
| Cone18ag1289 | Cone-Chr18:9012121 | Cone4ag1855 | Cone-Chr4:13314103 | 0 | dispersed | |
| Cone11ag0196 | Cone-Chr11:963847 | Cone18ag1289 | Cone-Chr18:9012121 | 0 | wgd | |
| Cone16ag0309 | Cone-Chr16:3628541 | Cone18ag1289 | Cone-Chr18:9012121 | 2.77E-17 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone18ag1289 | K01535 | - | csv:101221564 | 1703.34 |