Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1289 ATGGGGATCACTCTTGAGGAGATAAAGAATGAAACTGTTGATCTGGAGAAAATTCCGATTGAGGAAGTGTTTGAGCAATTGAAATGTACTCGAGAAGGTCTATCAGCCCAGGAGGGAGAAAGTCGACTTCAGATCTTTGGCCCAAACAAGTTAGAAGAGAAAAAGGAAAGCAAGTTGCTGAAGTTTCTGGGTTTCATGTGGAATCCATTGTCATGGGTCATGGAAGCTGCCGCTATTATGGCAATTGCCTTGGCCAATGGAGGTGGGAAGCCACCAGATTGGCAGGACTTTGTAGGTATCGTCTGTCTCTTGGTCATTAACTCCACCATTAGTTTCATCGAAGAAAACAATGCTGGCAACGCTGCTGCTGCTCTCATGGCTGGTCTTGCGCCTAAAACTAAGGTGCTTAGAGACGGGCAATGGAAAGAGCAGGATGCTGCAATTCTTGTTCCAGGAGACATCATTAGCATCAAACTAGGAGACATTGTCCCTGCTGATGCTCGTCTCCTTGAAGGTGATCCTTTAAAGATTGATCAATCTGCGCTCACTGGAGAATCACTTCCTGTTACGAGAAACCCAGGAGATGAAGTTTTCTCTGGTTCAACCTGCAAACAAGGAGAACTTGAAGCTGTTGTGATTGCTACTGGAGTTCATACTTTCTTTGGAAAGGCAGCACATCTTGTTGACAGCACCAACCAAGTCGGACACTTCCAAAAGGTTCTTACTGCTATTGGGAATTTCTGTATCTGCTCCATTGCAGTCGGAATGCTCATTGAGATTGTAGTCATGTACCCGATTCAGCATCGTGAATATAGGAAGGGTATTGACAATCTTTTGGTCCTCTTGATCGGAGGAATCCCAATTGCCATGCCTACTGTCTTGTCAGTGACAATGGCTATTGGGTCTCACAAGTTATCCCAACAAGGTGCCATCACCAAGCGTATGACTGCCATTGAAGAAATGGCTGGCATGGATGTACTCTGCAGTGACAAGACAGGGACACTTACTCTCAACAAGCTTACTGTTGACAAAAACTTGATTGAGGTATTTGCCAAGGATGTGGACAAAGATCATGTGATGTTGCTTGCAGCAAGGGCTTCGAGAACTGAAAACCAAGATGCTATTGATGCTGCCATTGTGGGAACACTAGCAGACCCAAAGGAGGCTCGTGCTGGAATAAGAGAGGTGCACTTCTTCCCATTCAATCCTGTAGACAAGAGAACTGCTCTGACTTACATTGATTCAAATGGAAACTGGCATCGTGCTAGCAAAGGTGCTCCTGAGCAGATCTTGACTCTCTGCAACTGCAAGGAGGACTTCAAGAGAAAGGTTCATGCCATCATTGATAAGTTTGCTGAGCGTGGCCTTCGATCATTGGCAGTTGCTAGACAGGAAGTGCCTGAGAAAACTAAGGAAAGTTCTGGTGGTCCATGGCAATTTGTTGGTCTATTGTCCCTCTTCGATCCTCCAAGACACGACAGTGCTGATACCATCCGCAGGGCTCTTAACTTGGGTGTGAACGTCAAAATGATCACTGGCGATCAACTTGCCATTGCCAAGGAGACTGGCCGGAGACTTGGAATGGGTACAAACATGTACCCCTCTGCTTCTTTACTCGGTCAACACAAAGATGAGAGCATAGCTGGCCTTCCAGTTGAGGAATTGATCGAAAAGGCTGATGGGTTTGCTGGAGTTTTCCCAGAACACAAATACGAAATTGTGAAGAAGTTGCAAGAAAGCAAGCACATTTGTGGAATGACAGGAGATGGTGTGAATGATGCCCCTGCTTTGAAAAAGGCCGACATTGGTATTGCTGTGGCTGATGCTACAGATGCTGCACGAAGTGCTTCTGATATTGTTCTCACAGAGCCTGGACTGAGTGTCATCATCAGTGCAGTGCTTACCAGCAGAGCCATCTTCCAGAGAATGAAGAACTATACCATCTATGCAGTTTCCATTACAATCCGTATTGTGTTTGGCTTCATGCTTATTGCACTCATCTGGAAGTTTGATTTCTCGCCATTCATGGTTCTGATCATTGCTATTCTTAATGACGGTACAATCATGACCATCTCTAAGGATAGAGTGAAGCCATCTCCATTGCCTGATAGCTGGAAACTTAAAGAGATATTCGCTACCGGAGTCGTACTTGGAGGTTACTTGGCAATAATGACAGTCGTATTCTTTTGGATCATGAAGGAGACAGATTTCTTCTCAGATAAATTCGGAGTGAGATCCATTAGGGACAAGCCAGATGAAATGATGGCTGCTCTGTACCTACAAGTCAGTATTGTCAGCCAGGCTCTAATCTTCGTCACTCGTTCTCGTGGTTGGTCCTTCTATGAACGCCCCGGTCTACTTCTGATGGGCGCTTTCTTGATTGCACAACTGGTGGCGACTGTCATTGCAGTATATGCCAGCTGGGGTTTCGCAAGGATTGAAGGATGTGGATGGGGCTGGGCCGGAGTGATCTGGCTTTACAGCGTTGTGTTCTACTTCCCGCTTGACATAATGAAGTTTGCAATCCGTTACATCTTAAGTGGCAAGGCCTGGAATAACTTGCTTGAAAACAAGACTGCATTCACAACGAAGAAGGACTATGGAAAAGAAGAGAGGGAAGCCCAATGGGCCCATGCTCAAAGGACCCTCCATGGGCTTCAACCCCCACAAACATCCAACCTCTTCTCTGAAAAGAGCAGCTACAGAGAACTTTCTGAGATTGCAGAACAGGCCAAACGACGGGCAGAAGTTGCAAGGCTTAGGGAGCTGACTACACTAAAGGGTCACGTGGAGTCGGTGGTGAAGCTGAAGGGGCTGGACATTGATACGATTCAGCAGCATTACACCGTGTGA 2853 46.23 MGITLEEIKNETVDLEKIPIEEVFEQLKCTREGLSAQEGESRLQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGQWKEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTRNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLIEIVVMYPIQHREYRKGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKDVDKDHVMLLAARASRTENQDAIDAAIVGTLADPKEARAGIREVHFFPFNPVDKRTALTYIDSNGNWHRASKGAPEQILTLCNCKEDFKRKVHAIIDKFAERGLRSLAVARQEVPEKTKESSGGPWQFVGLLSLFDPPRHDSADTIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQHKDESIAGLPVEELIEKADGFAGVFPEHKYEIVKKLQESKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLAIMTVVFFWIMKETDFFSDKFGVRSIRDKPDEMMAALYLQVSIVSQALIFVTRSRGWSFYERPGLLLMGAFLIAQLVATVIAVYASWGFARIEGCGWGWAGVIWLYSVVFYFPLDIMKFAIRYILSGKAWNNLLENKTAFTTKKDYGKEEREAQWAHAQRTLHGLQPPQTSNLFSEKSSYRELSEIAEQAKRRAEVARLRELTTLKGHVESVVKLKGLDIDTIQQHYTV 950
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
18 9012121 9019396 + Conep18aG0133100.1 Cone18ag1289 458250
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1289 950 PANTHER CALCIUM-TRANSPORTING ATPASE 16 874 - GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER)
Cone18ag1289 950 Gene3D - 93 814 - -
Cone18ag1289 950 Gene3D - 340 487 IPR023299 GO:0000166(InterPro)
Cone18ag1289 950 FunFam Plasma membrane ATPase 340 487 - -
Cone18ag1289 950 Pfam Cation transporter/ATPase, N-terminus 17 80 IPR004014 -
Cone18ag1289 950 FunFam Plasma membrane ATPase 131 215 - -
Cone18ag1289 950 NCBIfam plasma-membrane proton-efflux P-type ATPase 33 805 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Cone18ag1289 950 Pfam E1-E2 ATPase 130 307 - -
Cone18ag1289 950 PRINTS P-type cation-transporting ATPase superfamily signature 482 493 - -
Cone18ag1289 950 PRINTS P-type cation-transporting ATPase superfamily signature 610 622 - -
Cone18ag1289 950 PRINTS P-type cation-transporting ATPase superfamily signature 504 514 - -
Cone18ag1289 950 PRINTS P-type cation-transporting ATPase superfamily signature 178 192 - -
Cone18ag1289 950 PRINTS P-type cation-transporting ATPase superfamily signature 328 342 - -
Cone18ag1289 950 PRINTS P-type cation-transporting ATPase superfamily signature 587 606 - -
Cone18ag1289 950 Pfam haloacid dehalogenase-like hydrolase 324 601 - -
Cone18ag1289 950 Coils Coil 901 921 - -
Cone18ag1289 950 Gene3D - 325 624 IPR023214 -
Cone18ag1289 950 CDD P-type_ATPase_H 33 840 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Cone18ag1289 950 NCBIfam HAD-IC family P-type ATPase 562 675 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone18ag1289 950 NCBIfam HAD-IC family P-type ATPase 100 359 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone18ag1289 950 SFLD p-type atpase 310 638 IPR044492 -
Cone18ag1289 950 Gene3D - 131 215 - -
Cone18ag1289 950 SUPERFAMILY HAD-like 324 634 IPR036412 -
Cone18ag1289 950 Gene3D - 899 950 - -
Cone18ag1289 950 FunFam ATPase 4 plasma membrane-type 586 814 - -
Cone18ag1289 950 SFLD Haloacid Dehalogenase 310 638 - -
Cone18ag1289 950 FunFam Plasma membrane ATPase 479 635 - -
Cone18ag1289 950 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 846 IPR023298 -
Cone18ag1289 950 ProSitePatterns E1-E2 ATPases phosphorylation site. 330 336 IPR018303 -
Cone18ag1289 950 SMART Cation_ATPase_N_a_2 14 86 IPR004014 -
Cone18ag1289 950 PRINTS H+-transporting ATPase (proton pump) signature 759 780 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone18ag1289 950 PRINTS H+-transporting ATPase (proton pump) signature 587 603 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone18ag1289 950 PRINTS H+-transporting ATPase (proton pump) signature 559 575 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone18ag1289 950 PRINTS H+-transporting ATPase (proton pump) signature 618 643 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone18ag1289 950 PRINTS H+-transporting ATPase (proton pump) signature 444 462 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone18ag1289 950 SUPERFAMILY Calcium ATPase, transduction domain A 131 228 IPR008250 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0301 Cone-Chr16:3467576 Cone18ag1289 Cone-Chr18:9012121 0 dispersed
Cone17ag0028 Cone-Chr17:197752 Cone18ag1289 Cone-Chr18:9012121 3.09E-192 dispersed
Cone18ag1289 Cone-Chr18:9012121 Cone4ag1855 Cone-Chr4:13314103 0 dispersed
Cone11ag0196 Cone-Chr11:963847 Cone18ag1289 Cone-Chr18:9012121 0 wgd
Cone16ag0309 Cone-Chr16:3628541 Cone18ag1289 Cone-Chr18:9012121 2.77E-17 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1289 K01535 - csv:101221564 1703.34