Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1310 ATGGATGAGAGGGATTCTGAAAGACGGTATGCAGACGGTCTTAATAATTTACATGATTCTGTTGATCACATTCCTGTAAAGGACCACTTCATCGATCCAACGAGTTTTGGAAGCAGCAGTCCATATTATAATCTGCGCTGCGTAAAAATTCCGGGTAGAGGGTCAGGGCAAAGGTATAATGACATAGAAGGTCAAAGGAGTCCTCTCAGTCCTGGTTATTACTCTTCAAGGCATCAGGGGATGGCAGAATATCCATATTCTCCGTCTTCTGGAAGATACCATCTACCAGAATATTGTGAGAATCTTGTCTGGATGTCAAATGGAAGTATAATTAGTGATAATTCGGGTTTTCCTAGTAATATTATGATGAACAGTACTGGATGTATTTTCCTCAGAATCAATCCCCTATGTTTGCAGTTGTTAGTCCATCAGCAATTAAACGCATGGGTTGAGGAAACAAGATTGCATAATACTGGAGGTGGAAGCAGGTTGGGTAATGATTACTACTTTGTAGATGATCCTACCTTGAACTTCCCCATTGGGCAGAGTAATTTAACAGAGGGTCAATGCACTACTAATCATAGACCCGGGTCTGAATTGGAGAATGAAGTATTTCACAAACAAGTGTGGCCCGGTTCATCTTATGCACACATTCCTTCACCTGAAAAATGTGGGGTGGTGTCTGGTAATAATAATGGCTTATGGAAAAATGTTCAAAATCCATCGCAAGTTGTTTCACCCTCTTATGAAATTAGATTTTCAGATAAGAATTGCGAGGGGGAACTTCCTGAGATGTTAAGTTTGAAGCTATTAGACACTAGAGCAGCACTAGAAGAGGCCGATCAGGTGAAAGCTCAAATAGAAGAAACTGATGGCGTGAAGCTTGATTTAGTATCCAAAGAAGAAACCGGAAATGATTCAGAGTTAGTGGAGGAATCTGAGTTGGAAGCTGATAATGATCATCAAGAGACTTCTAAAATTGAGCTAACAGAGGCTGAAGACAGGAGTCATCTCAAGGGGATTACAGTTCATTTTGGGAAATGGAAAGGTTCCAATGTAGCCATAAAGAGGATCAGGGCCAGCTGTTTTTCTGGGCGTCCATCTGAAAGAGAATGCTTGATTTCAGATTTCTGGAAGAAGGCTCTCATAATGAATTCTTTACATCATCCAAACATTGTTTCGTTCTATGGTATTGTTCGTGATGGTCCTGATGGATCCCTAGCAACCGTGACAGAATTCATGCGTAAGAGACTCATCATAGCAATGGATGCTGCTTTTGGGATGGAGTCTTTACACGGGAGGAACACTGTTCATTTTGACTTGAAATGTGAGAATCTTCTAGTTAATATGAGAGATCCTCAACGTCCTGTATGCAAGATTGGCGATTTGGGTTTATCCAAGGTAAAACAACACACCTTAGTGTCAGGAGGTGTTCGTGGAACCTTACTTTTGATGGCACCTGAGCTACTTAGTGGAATAAGGAACATGGTCACAGAGAAGGTGGGTTATCCTCCTTACAGGACACAGCCTGTGAAATTTTCTTACCTTTAA 1551 41.13 MDERDSERRYADGLNNLHDSVDHIPVKDHFIDPTSFGSSSPYYNLRCVKIPGRGSGQRYNDIEGQRSPLSPGYYSSRHQGMAEYPYSPSSGRYHLPEYCENLVWMSNGSIISDNSGFPSNIMMNSTGCIFLRINPLCLQLLVHQQLNAWVEETRLHNTGGGSRLGNDYYFVDDPTLNFPIGQSNLTEGQCTTNHRPGSELENEVFHKQVWPGSSYAHIPSPEKCGVVSGNNNGLWKNVQNPSQVVSPSYEIRFSDKNCEGELPEMLSLKLLDTRAALEEADQVKAQIEETDGVKLDLVSKEETGNDSELVEESELEADNDHQETSKIELTEAEDRSHLKGITVHFGKWKGSNVAIKRIRASCFSGRPSERECLISDFWKKALIMNSLHHPNIVSFYGIVRDGPDGSLATVTEFMRKRLIIAMDAAFGMESLHGRNTVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLLLMAPELLSGIRNMVTEKVGYPPYRTQPVKFSYL 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9105690 9108075 + Conep18aG0135200.1 Cone18ag1310 458271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1310 516 Pfam Protein kinase domain 347 500 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag1310 516 PANTHER SERINE-THREONINE PROTEIN KINASE 340 501 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone18ag1310 516 MobiDBLite consensus disorder prediction 299 324 - -
Cone18ag1310 516 SUPERFAMILY Protein kinase-like (PK-like) 342 499 IPR011009 -
Cone18ag1310 516 ProSiteProfiles Protein kinase domain profile. 295 516 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag1310 516 Gene3D Phosphorylase Kinase; domain 1 340 413 - -
Cone18ag1310 516 SMART serkin_6 336 516 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag1310 516 Gene3D Transferase(Phosphotransferase) domain 1 414 503 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag1310 Cone-Chr18:9105690 Cone2ag0627 Cone-Chr2:3992967 1.17E-92 dispersed
Cone18ag1310 Cone-Chr18:9105690 Cone16ag0368 Cone-Chr16:6068296 3.42E-94 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82348 PF00254 FKBP_C 9.40E-17 CL0487 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1310 - - - 0.0