Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1329 ATGTGGAGCTATGTGTGGACTTGCAGAAAGGAAGAGAAAGCTGAGCAGGCCCGTGCTAAGGCACAAGCTCTGGAAGAAGCCCTTGATGTTGATGACTTGGAAGCAGACAGAAGACCGGAAGATCTTATGCTTAGTTATGTTAGCGGAGAAAAGGGAAAAGATCGCTCTGATCGGGAAGTTGTTACCCCTTGGTTCAAATTTTTGTGGGAGGCTTACAGAATAGGACTTGAGATCTTGCGGAACAATTCAAAGTTGGAGGCGCTTTATGCGATGATAGCTCATTGGGCTTTCCAGTTCTGCAAGCAGTACAAAAGGAAGACAGAATTTCGTAGGTTGTGTGAAATTATCAGGAATCACCTTTCAAATCTTAATAAATATAGAGACCAAAGAGATCGGCCTGACCTGTCAGCCCCCGAGAGCTTGCAACTGTACCTTGACACTAGAATTGAACAGCTAAAGATGGCTGCAGAGCTTGAACTCTGGCAGGAAGCTTTTCGTTCAGTTGAAGATATTCATGGCTTGATGTGCATGGTTAAGAAAACACCCAAGGCGTCCTTGATGGTGGTTTATTATGCCAAATTAGCAGAAATTTTCTGGATTTCATCTGGCCATCTTTATCATGCTTATGCATGGTTGAAGCTTTTCACCCTTCAGAAAAGCTTCAATAAGAATTTAAGCCAGAAGGACTTGCAATTGATAGCATCCTCTGTTGTTTTAGCTGCTCTTTCAGTGTCTCCCTATGACAACACACATCGCGCATCCCATTTGGAACTTGAAATTGGAAAGGAGCGTAACTGGAGGATGGCCAATCTTTTAGGCTTCAATCTTGACCCTAAACTTGACAGTAGGGAAATGCTTTCACGGTCAAACCTTTTAACTGAATTGGTTTCTAAAGGAATTCTGAGCTGTGCAACTCAGGAAGTAAAAGATATTTACCATCTCTTGGAGCATGATTTTTTCCCACTTGATCTCGGGTCAAAGTTGCAGCTCTTGTTGAACAAAATCTCAAAGCTTGGGGGCAAGCTTTCTTCAGCTTCTTCTGTCCCAGAAGTGCATCTGTCTCAATATGTGTCTGGCCTGGAAAAAATTGCCACGCTGAGGTTGCTTCAGCAGGTGCCTCAGGTTTACCAGACAATGAAAATTAAGAGCTTATCTCGGATGATTCCATTTTTCGATCTTCCTATCATTGAGAAAATTTCTGTGGATGCTGTTAAACAAAATTTCATAGCCATGAAAGTTGACCATACAAGGGGGGTGGTTTTATTTGGCAGTTTGGGGGTTGAATCGGATGGTCTACAGAATCATCTAACTATTCTTGCTGAATCCTTGAACAAAGCAAGGGCCATGATCTATCCACCTGTCGGGAAGGCATCCAAAATAGGTGAGATATTTCCTGGTTTAGCAGATACAGTGGATAAAGAACACAAAAGACTTCTTGCACGAAAGTCTATTATAGAAAAAAGGAAAGAAGATCAGGAGTGCCAACTTTTGGAAATGGAACGTGAGGAAGAGTCAAATAGGGTAAGATTACAGAAAATAACAGAAGAGGCAGAGCAAAAGAGACTTGCAACCGAGTATGAGCGAAGGAAAACCCAAAGGCTCCTTAGGGAAATAGAAGAGCGGGAGCTTGAAGAAGCGCAAGCTTTACTTCAGGCACGTGGCACTAAGAAGAAAGGAAAGAAGCCAATCATAGAAGGGGAAAAGATAACAAAACAAAGTTTAATGAAGCTGGCTCTGGATGAGCAGCTTAAGGAGAGGCAGGAAATGGAGAAGAAGTTACAAAAGCTAGCTAAAATCATGGACTATTTGGAGAGAGCAAAACGAGAAGAGTCTGCACCTCTAATCGAAGCTGCATTTCAAAAACGTGTAGTTGAAGTAAGAGTGCTTAACGAACGAGAGCAACAGCTGGAGGTTGAGCTTAGCAAGCAGCACCATAAACAGGACCTCAAGGAGAAGAATCGACTGGCACGAATAATGGAGCATAAGACTATATTCCAGGAAAGAGTGATGAGCCGTCGCCAAGAAGAGTTTGATAGACTTAGAGCAGAGAAGGAGGAGCAAATCCAGCAAAGAATTCAGACTAGGAAGCTGGAGAGGATGGTTAAGAGGAAGAAAGTATTTTTTGTGAGGGGTGAAGAGGAACGACTTAGAATACTGCATGAACAGGAGGAAGCTCGCAAGCGTGAAGAGGCAGAGAGGCGAAGAAAGGAAGAAGCTGAACGCAAGGCAAAACTGGATGAGATTGCTGAAAAACAGAGGCAAAGGGAGCGAGAACTAGATGAAAAGGAAAGACTGAGGAAAGAAGCTCTGCTTGGGAGATCGTCCGAGGGGCCGGCTAGACATTCCGAGATTCCTCCTTTACCTCGCCCATCAGAATCTCTGGCTGCTGCTGCTGCTGCTGCCCTAACCCCCGGAAAATATGTACCCAGGTTCAAAAGGGCAAGCACTGAAGGGTCTGCTCCTGTTCCTGGTCCAGCTCCATCGCCTGAACCTGACCGATGGGGCAGCAGCCGGGCAGATCCTCGAGTTGCCCCGTTAGGTGATCGGGACATATGGCGTGACGATGACCGTAGACCATCCTCATTTGGGAGCCTAAGCAGCAGATCATCTTGGTCTTCTTCCAAGGTTCTCTCACACGGTGAACGCTGA 2649 44.85 MWSYVWTCRKEEKAEQARAKAQALEEALDVDDLEADRRPEDLMLSYVSGEKGKDRSDREVVTPWFKFLWEAYRIGLEILRNNSKLEALYAMIAHWAFQFCKQYKRKTEFRRLCEIIRNHLSNLNKYRDQRDRPDLSAPESLQLYLDTRIEQLKMAAELELWQEAFRSVEDIHGLMCMVKKTPKASLMVVYYAKLAEIFWISSGHLYHAYAWLKLFTLQKSFNKNLSQKDLQLIASSVVLAALSVSPYDNTHRASHLELEIGKERNWRMANLLGFNLDPKLDSREMLSRSNLLTELVSKGILSCATQEVKDIYHLLEHDFFPLDLGSKLQLLLNKISKLGGKLSSASSVPEVHLSQYVSGLEKIATLRLLQQVPQVYQTMKIKSLSRMIPFFDLPIIEKISVDAVKQNFIAMKVDHTRGVVLFGSLGVESDGLQNHLTILAESLNKARAMIYPPVGKASKIGEIFPGLADTVDKEHKRLLARKSIIEKRKEDQECQLLEMEREEESNRVRLQKITEEAEQKRLATEYERRKTQRLLREIEERELEEAQALLQARGTKKKGKKPIIEGEKITKQSLMKLALDEQLKERQEMEKKLQKLAKIMDYLERAKREESAPLIEAAFQKRVVEVRVLNEREQQLEVELSKQHHKQDLKEKNRLARIMEHKTIFQERVMSRRQEEFDRLRAEKEEQIQQRIQTRKLERMVKRKKVFFVRGEEERLRILHEQEEARKREEAERRRKEEAERKAKLDEIAEKQRQRERELDEKERLRKEALLGRSSEGPARHSEIPPLPRPSESLAAAAAAALTPGKYVPRFKRASTEGSAPVPGPAPSPEPDRWGSSRADPRVAPLGDRDIWRDDDRRPSSFGSLSSRSSWSSSKVLSHGER 882
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9201622 9207168 - Conep18aG0137100.1 Cone18ag1329 458290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1329 882 Gene3D - 275 408 - -
Cone18ag1329 882 Gene3D - 182 256 - -
Cone18ag1329 882 MobiDBLite consensus disorder prediction 862 882 - -
Cone18ag1329 882 Coils Coil 482 520 - -
Cone18ag1329 882 Coils Coil 14 34 - -
Cone18ag1329 882 MobiDBLite consensus disorder prediction 843 861 - -
Cone18ag1329 882 Coils Coil 670 690 - -
Cone18ag1329 882 Pfam PCI domain 351 423 IPR000717 -
Cone18ag1329 882 ProSiteProfiles PCI domain profile. 236 427 IPR000717 -
Cone18ag1329 882 MobiDBLite consensus disorder prediction 724 882 - -
Cone18ag1329 882 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 11 874 IPR027512 GO:0001732(PANTHER)|GO:0002188(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0005852(InterPro)|GO:0043614(PANTHER)|GO:0071540(PANTHER)|GO:0071541(PANTHER)
Cone18ag1329 882 Coils Coil 579 609 - -
Cone18ag1329 882 Gene3D UVR domain 131 181 - -
Cone18ag1329 882 Pfam eIF3a, PCI domain, TPR-like region 11 321 IPR054711 -
Cone18ag1329 882 MobiDBLite consensus disorder prediction 724 774 - -
Cone18ag1329 882 Coils Coil 719 768 - -
Cone18ag1329 882 FunFam Eukaryotic translation initiation factor 3 subunit A 131 182 - -
Cone18ag1329 882 FunFam Eukaryotic translation initiation factor 3 subunit A 182 256 - -
Cone18ag1329 882 FunFam Eukaryotic translation initiation factor 3 subunit A 266 408 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag1329 Cone-Chr18:9201622 Cone1ag1535 Cone-Chr1:57325335 0 dispersed
Cone11ag0153 Cone-Chr11:718675 Cone18ag1329 Cone-Chr18:9201622 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1329 K03254 - csv:101215735 1117.06