Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1355 ATGAATAAAATAATCCCCATCCAACGCTCCCTCGCTTCCGGCCCTACCCTCAGCCCCACCTCAGACCAGCACCCATACTATATACTCTTACGGTATCAAATCCTCGCTCCTGATTCTGACATTGTCGGGCACTGGAACCGAATCTTCCTCATCACATGCATAATCGCTCTCTTCATTGATCCTCTCTACTTTTTCCTTCCTTATGTAGGAGGCCCAGCCTGCCTCCAGACCGATTATGGTCTCGGGTTCTTGATCACTTTCTTCCGCTCCGTAACCGATTTGTTCTTCGTTCTTCACATGGTCATGAAATTCCGCACCGCCTTTGTTTCCCCGAGTTCTAGGGTTTTCGGAAGGGGAGAATTGGTTACGGATCCGAAGGCTATCGCAATGCGGTACTTGAAGTCTGATTTCATGATCGATCTCGCCGCTTTACTTCCTCTCCCACAAATTGTGATATATTTGATTATTCCGAACACGAGGAAGACAAGAACCGATCATGCGAACAACACTCTTGCTTTATTTGTTCTTATTCAATACGTTCCGAGAATTTTTGTCATGTTCCCACTAAATCGGCGGATCGTGAAAACAACCGGGGTTGTTGCAAAAACTGCTTGGGCTGGAGCCGGATACAATCTCATCCTTTACATGCTGGCCAGTCATGTGTTAGGAGCTACATGGTATCTCTTGTCCCTAGGGCGGCAATTCCAGTGCTGGAAATTCGAATGCGAAAAAGAGAACACCTCCAAATATATGCCATGCCTTCCGAATTTCCTAGATTGTAACAGCTTGGGACAGCCCGAACGGAATGCTTGGCTTAACATCACAAGGGTCACTACGAATTGCAACTCAAAGGGGAAAGACCCGTATTTTCAGTTTGGAATGTTTTCGGATGCTATTGTGAATGAGGTTTTCGCTGCAAAATTCATCGACAAGTACTTGTATTGTCTTTGGTGGGGTCTAAGAAGCTTAAGTTCATATGCACAATCTTTGGATACGACCACATTTGTTGTAGAGACCGGATTTTCCATATTTGTATGCATATTTGGTTTGATCCTATCCGCCCAATTAATTGGAGCAATGCAGGGGTATTTGCAATCCATAAATGCAAGAATAGAAGAGTGGAGGTTGAAACGAAAAGATGCCGAGGAATGGATGAGATACAGGCAGCTACCTGAAGATCTTAAAGAACGAATCCGACGTTATGTCCAATATAGGTGGATCGCCACAAGAGGAGTCAATGAAGAATCAATATTACGTTCTTTGCCGGCAGACTTGCGTTGTGAAATTCAACGTCACTTATGCCTTTCCCTTGTCCGCCGTGTTCCATTTTTTGCGCAAATGGACGACCAACTTCTAGACGCTATATGTGAACGACTTGTCTTGTACTTGAGCACACAAGGTACGTACATTGCTTGTGAGGGCGATCCAGTAAATGAGATGCTATTTATCATAAGAGGGCAATTAGAGAGCTCTACGACAAATGGGGGTAAAGCCAGATTCTTCAACTCAATCATTCTTAGACCGGGCGATTTTTGTGGCGAAGAGTTACTTACCTGGGCCTTAATGCCTAGCTCAAGCCTGAATGTTCCATCTTCTACTCGAACCGTCAAGGCTTTAACAGAAGTTGAAGCTTTTGCGCTTCAAGCCGAGGACCTTAAATTTGTGGCAGGTCAGTTTAAACGGCTCCATAGTATGAAATTACAACATGCTTTTAGGTATTACTCTCATCAATGGAGAACATGGGGTGCTTGTTTGATACAAGTGGCTTGGAGAAAATTTAAGAAGAGGCAGTTAGAAAAGGATTTGGCATTGAAAGAGAGCTTATCGTATGATCCAGATGAAGATAATTACCATGGAGACGAGAAGGAAGGCGAGAGCTATGATTATGAGCAAGAAGAGGGAAATTCAGGGGGTGGTAATGAAGCTAATGTTCCTCAGTTAGCGGCTACCATTATGGCTTCTAAGTTTGCTAGAGGGCTGCACCATAAATTGCAGGCCCGTCCATCTTCCCCAAGCTTAGATATTCCGAAGCTGTTTAAACCGGATGAACCGAACTTCTTTGAAGAATAG 2070 44.3 MNKIIPIQRSLASGPTLSPTSDQHPYYILLRYQILAPDSDIVGHWNRIFLITCIIALFIDPLYFFLPYVGGPACLQTDYGLGFLITFFRSVTDLFFVLHMVMKFRTAFVSPSSRVFGRGELVTDPKAIAMRYLKSDFMIDLAALLPLPQIVIYLIIPNTRKTRTDHANNTLALFVLIQYVPRIFVMFPLNRRIVKTTGVVAKTAWAGAGYNLILYMLASHVLGATWYLLSLGRQFQCWKFECEKENTSKYMPCLPNFLDCNSLGQPERNAWLNITRVTTNCNSKGKDPYFQFGMFSDAIVNEVFAAKFIDKYLYCLWWGLRSLSSYAQSLDTTTFVVETGFSIFVCIFGLILSAQLIGAMQGYLQSINARIEEWRLKRKDAEEWMRYRQLPEDLKERIRRYVQYRWIATRGVNEESILRSLPADLRCEIQRHLCLSLVRRVPFFAQMDDQLLDAICERLVLYLSTQGTYIACEGDPVNEMLFIIRGQLESSTTNGGKARFFNSIILRPGDFCGEELLTWALMPSSSLNVPSSTRTVKALTEVEAFALQAEDLKFVAGQFKRLHSMKLQHAFRYYSHQWRTWGACLIQVAWRKFKKRQLEKDLALKESLSYDPDEDNYHGDEKEGESYDYEQEEGNSGGGNEANVPQLAATIMASKFARGLHHKLQARPSSPSLDIPKLFKPDEPNFFEE 689
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9328826 9333087 + Conep18aG0139900.1 Cone18ag1355 458316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1355 689 CDD CAP_ED 443 574 IPR000595 -
Cone18ag1355 689 Pfam Ion transport protein 45 370 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cone18ag1355 689 ProSiteProfiles cAMP/cGMP binding motif profile. 443 573 IPR000595 -
Cone18ag1355 689 SMART cnmp_10 443 574 IPR000595 -
Cone18ag1355 689 SUPERFAMILY cAMP-binding domain-like 372 565 IPR018490 -
Cone18ag1355 689 Gene3D Jelly Rolls 441 561 IPR014710 -
Cone18ag1355 689 Gene3D - 47 364 - -
Cone18ag1355 689 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 31 658 - -
Cone18ag1355 689 MobiDBLite consensus disorder prediction 611 625 - -
Cone18ag1355 689 MobiDBLite consensus disorder prediction 662 689 - -
Cone18ag1355 689 MobiDBLite consensus disorder prediction 611 644 - -
Cone18ag1355 689 Gene3D Helix hairpin bin 365 434 - -
Cone18ag1355 689 Pfam Cyclic nucleotide-binding domain 466 553 IPR000595 -
Cone18ag1355 689 SUPERFAMILY Voltage-gated potassium channels 37 365 - -
Cone18ag1355 689 FunFam Cyclic nucleotide-gated ion channel 1 441 559 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1085 Cone-Chr17:8084335 Cone18ag1355 Cone-Chr18:9328826 1.09E-272 dispersed
Cone18ag1355 Cone-Chr18:9328826 Cone2ag0610 Cone-Chr2:3700486 4.93E-271 dispersed
Cone11ag0123 Cone-Chr11:551157 Cone18ag1355 Cone-Chr18:9328826 2.66E-221 wgd
Cone13ag0132 Cone-Chr13:761986 Cone18ag1355 Cone-Chr18:9328826 3.43E-283 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1355 K05391 - csv:101216651 961.829