Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone18ag1355 | ATGAATAAAATAATCCCCATCCAACGCTCCCTCGCTTCCGGCCCTACCCTCAGCCCCACCTCAGACCAGCACCCATACTATATACTCTTACGGTATCAAATCCTCGCTCCTGATTCTGACATTGTCGGGCACTGGAACCGAATCTTCCTCATCACATGCATAATCGCTCTCTTCATTGATCCTCTCTACTTTTTCCTTCCTTATGTAGGAGGCCCAGCCTGCCTCCAGACCGATTATGGTCTCGGGTTCTTGATCACTTTCTTCCGCTCCGTAACCGATTTGTTCTTCGTTCTTCACATGGTCATGAAATTCCGCACCGCCTTTGTTTCCCCGAGTTCTAGGGTTTTCGGAAGGGGAGAATTGGTTACGGATCCGAAGGCTATCGCAATGCGGTACTTGAAGTCTGATTTCATGATCGATCTCGCCGCTTTACTTCCTCTCCCACAAATTGTGATATATTTGATTATTCCGAACACGAGGAAGACAAGAACCGATCATGCGAACAACACTCTTGCTTTATTTGTTCTTATTCAATACGTTCCGAGAATTTTTGTCATGTTCCCACTAAATCGGCGGATCGTGAAAACAACCGGGGTTGTTGCAAAAACTGCTTGGGCTGGAGCCGGATACAATCTCATCCTTTACATGCTGGCCAGTCATGTGTTAGGAGCTACATGGTATCTCTTGTCCCTAGGGCGGCAATTCCAGTGCTGGAAATTCGAATGCGAAAAAGAGAACACCTCCAAATATATGCCATGCCTTCCGAATTTCCTAGATTGTAACAGCTTGGGACAGCCCGAACGGAATGCTTGGCTTAACATCACAAGGGTCACTACGAATTGCAACTCAAAGGGGAAAGACCCGTATTTTCAGTTTGGAATGTTTTCGGATGCTATTGTGAATGAGGTTTTCGCTGCAAAATTCATCGACAAGTACTTGTATTGTCTTTGGTGGGGTCTAAGAAGCTTAAGTTCATATGCACAATCTTTGGATACGACCACATTTGTTGTAGAGACCGGATTTTCCATATTTGTATGCATATTTGGTTTGATCCTATCCGCCCAATTAATTGGAGCAATGCAGGGGTATTTGCAATCCATAAATGCAAGAATAGAAGAGTGGAGGTTGAAACGAAAAGATGCCGAGGAATGGATGAGATACAGGCAGCTACCTGAAGATCTTAAAGAACGAATCCGACGTTATGTCCAATATAGGTGGATCGCCACAAGAGGAGTCAATGAAGAATCAATATTACGTTCTTTGCCGGCAGACTTGCGTTGTGAAATTCAACGTCACTTATGCCTTTCCCTTGTCCGCCGTGTTCCATTTTTTGCGCAAATGGACGACCAACTTCTAGACGCTATATGTGAACGACTTGTCTTGTACTTGAGCACACAAGGTACGTACATTGCTTGTGAGGGCGATCCAGTAAATGAGATGCTATTTATCATAAGAGGGCAATTAGAGAGCTCTACGACAAATGGGGGTAAAGCCAGATTCTTCAACTCAATCATTCTTAGACCGGGCGATTTTTGTGGCGAAGAGTTACTTACCTGGGCCTTAATGCCTAGCTCAAGCCTGAATGTTCCATCTTCTACTCGAACCGTCAAGGCTTTAACAGAAGTTGAAGCTTTTGCGCTTCAAGCCGAGGACCTTAAATTTGTGGCAGGTCAGTTTAAACGGCTCCATAGTATGAAATTACAACATGCTTTTAGGTATTACTCTCATCAATGGAGAACATGGGGTGCTTGTTTGATACAAGTGGCTTGGAGAAAATTTAAGAAGAGGCAGTTAGAAAAGGATTTGGCATTGAAAGAGAGCTTATCGTATGATCCAGATGAAGATAATTACCATGGAGACGAGAAGGAAGGCGAGAGCTATGATTATGAGCAAGAAGAGGGAAATTCAGGGGGTGGTAATGAAGCTAATGTTCCTCAGTTAGCGGCTACCATTATGGCTTCTAAGTTTGCTAGAGGGCTGCACCATAAATTGCAGGCCCGTCCATCTTCCCCAAGCTTAGATATTCCGAAGCTGTTTAAACCGGATGAACCGAACTTCTTTGAAGAATAG | 2070 | 44.3 | MNKIIPIQRSLASGPTLSPTSDQHPYYILLRYQILAPDSDIVGHWNRIFLITCIIALFIDPLYFFLPYVGGPACLQTDYGLGFLITFFRSVTDLFFVLHMVMKFRTAFVSPSSRVFGRGELVTDPKAIAMRYLKSDFMIDLAALLPLPQIVIYLIIPNTRKTRTDHANNTLALFVLIQYVPRIFVMFPLNRRIVKTTGVVAKTAWAGAGYNLILYMLASHVLGATWYLLSLGRQFQCWKFECEKENTSKYMPCLPNFLDCNSLGQPERNAWLNITRVTTNCNSKGKDPYFQFGMFSDAIVNEVFAAKFIDKYLYCLWWGLRSLSSYAQSLDTTTFVVETGFSIFVCIFGLILSAQLIGAMQGYLQSINARIEEWRLKRKDAEEWMRYRQLPEDLKERIRRYVQYRWIATRGVNEESILRSLPADLRCEIQRHLCLSLVRRVPFFAQMDDQLLDAICERLVLYLSTQGTYIACEGDPVNEMLFIIRGQLESSTTNGGKARFFNSIILRPGDFCGEELLTWALMPSSSLNVPSSTRTVKALTEVEAFALQAEDLKFVAGQFKRLHSMKLQHAFRYYSHQWRTWGACLIQVAWRKFKKRQLEKDLALKESLSYDPDEDNYHGDEKEGESYDYEQEEGNSGGGNEANVPQLAATIMASKFARGLHHKLQARPSSPSLDIPKLFKPDEPNFFEE | 689 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 9328826 | 9333087 | + | Conep18aG0139900.1 | Cone18ag1355 | 458316 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone18ag1355 | 689 | CDD | CAP_ED | 443 | 574 | IPR000595 | - | |
Cone18ag1355 | 689 | Pfam | Ion transport protein | 45 | 370 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone18ag1355 | 689 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 443 | 573 | IPR000595 | - | |
Cone18ag1355 | 689 | SMART | cnmp_10 | 443 | 574 | IPR000595 | - | |
Cone18ag1355 | 689 | SUPERFAMILY | cAMP-binding domain-like | 372 | 565 | IPR018490 | - | |
Cone18ag1355 | 689 | Gene3D | Jelly Rolls | 441 | 561 | IPR014710 | - | |
Cone18ag1355 | 689 | Gene3D | - | 47 | 364 | - | - | |
Cone18ag1355 | 689 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 31 | 658 | - | - | |
Cone18ag1355 | 689 | MobiDBLite | consensus disorder prediction | 611 | 625 | - | - | |
Cone18ag1355 | 689 | MobiDBLite | consensus disorder prediction | 662 | 689 | - | - | |
Cone18ag1355 | 689 | MobiDBLite | consensus disorder prediction | 611 | 644 | - | - | |
Cone18ag1355 | 689 | Gene3D | Helix hairpin bin | 365 | 434 | - | - | |
Cone18ag1355 | 689 | Pfam | Cyclic nucleotide-binding domain | 466 | 553 | IPR000595 | - | |
Cone18ag1355 | 689 | SUPERFAMILY | Voltage-gated potassium channels | 37 | 365 | - | - | |
Cone18ag1355 | 689 | FunFam | Cyclic nucleotide-gated ion channel 1 | 441 | 559 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone17ag1085 | Cone-Chr17:8084335 | Cone18ag1355 | Cone-Chr18:9328826 | 1.09E-272 | dispersed | |
Cone18ag1355 | Cone-Chr18:9328826 | Cone2ag0610 | Cone-Chr2:3700486 | 4.93E-271 | dispersed | |
Cone11ag0123 | Cone-Chr11:551157 | Cone18ag1355 | Cone-Chr18:9328826 | 2.66E-221 | wgd | |
Cone13ag0132 | Cone-Chr13:761986 | Cone18ag1355 | Cone-Chr18:9328826 | 3.43E-283 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone18ag1355 | K05391 | - | csv:101216651 | 961.829 |