Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1363 ATGGAGTCGGAAAAGAAATTTCCCTTGAATGCCAAAGATTATAAGTTATATGAAGAAGTTGGGGAAGGTGTTAGCGCCTCTGTGTACAGGGCTCTTTGCATTCCACTCAATGCAATTGTTGCTATTAAGGTTCTCGATTTGGAAAAGTGCAATAATGATCTGGATGGAATACGGCGAGAGGTACAAACGATGACCCTCATTAATCATACAAATTTATTACAAGCACATTGTTCATTCACTGCCGGCCACAGCCTTTGGGTTGTGATGCCATATATGGCTGGAGGATCCTGCCTTCATATAATGAAATCTTCGTATCCAGAAGGTTTTGAAGAGCCTGTTATAGCCACTTTGCTGCGTGAGGTCCTCAAAGCTCTTGTTTATCTTCATGCCCATGGCCATATCCATAGGGATGTGAAGGCTGGTAATATTTTAATTAATTCCAATGGTGCAGTCAAGCTTGCTGACTTTGGAGTGTCAGCATGCATGTTTGATACTGGAGACAGGCAACGTTCAAGAAATACTTTTGTTGGAACTCCTTGCTGGATGGCTCCTGAGGTCATGCAACAATTACATGGATATGACTTTAAGGCAGACATCTGGTCCTTTGGAATAACAGCACTTGAACTTGCCCATGGCCATGCCCCATTCTCCAAACATCCGCCAATGAAAGTTTTGCTAATGACTTTACAAAATGCTCCTCCTGGTCTTGATTATGAAAGAGACAAGAGATTTTCAAAGTCCTTCAAAGAGATGGTATCCGCATGCTTAGTGAAGGATCCAAAGAAACGTCCCACTTCGGAGAAGCTTCTGAAACATTCTTTCTTCAAGAATGGACGATCAAATGAATATCTCACTCGTACCATTCTTGATGATCTTGCGCCCCTTGGTGATCGTTTTAAGATGTTGAAGGCAAAAGAGGCTGATCTTCTTGGGCAAAACAAGGTTTTGTATGGAGATAAAGAGCATTTATCACAGCAAGAGTATATTCGAGGAATCAGTGCCTGGAACTTCAACCTTGAGGATTTGAAAAGTCAAGCTGCCCTTATTCAGGATGACAGTATCCCAGTTTCAGAGGATCCAAATGTATATAAGAAGCAAAGAGACAAGAATGATGAATTTGGATTTCACGTAGAGAAGCAATCCTTGGAAAGTTTGTACCATTTAAACTCTATACCAAGTCGGGAGGATGGGTCAGATGATTTTAGTGATTTAGAGGGTTCACTTGCCTCACTTCCTATTAAACCTCTTAAAGCACTCAAAGGTTGTTTTGACACTTGTGAGGATGATGTAAATATAAATAGCCCAAGAGCTATGGATCAAGAAAATGGAAAAGCTCAGGGTGAGTGTTCAGGGGAAAGTAGTTCACTACCACGTAATGCTGGTGATTTGAAAAAGAATTTTAGCTGTTCACTACTTCCGGATCATGCTAATTCTCCTAAAAAGGCTACTGCTGATAATGAGAGGGATTATTCGAAATATCTGCCTGATCGAAACTACAGTGGTCAATCGATTTATCGCCCGAAGAGAGATATGTGCAACCCTTCCTCTGTTGAGGATGCATCAGAAGGAGCTGTTGTTCAATGTAAAGGGCGGTTCAAAGTAACTTCTGCAGATCTCAGTCCTAAGGGTACCACAGCCGGCTCATTCAATGCTGTTTATAGAGCTTCAGTCAGTCCGACAAACTTGTCAGCTGACTCAATTCTCCCATCACTTCAATTTATTCTGCAGCACAATGCCCTGCAAAGGGAAGAGGTTATTAAATTGATCAAGTATCTGGAACAAACCTCTGTGAAGCAAGCAGAGTCAGGTGAGGGGGGCAGTGGTGACCTTTTGCAGATACCTCCTACTTCCTCTAGGGAGAGGGAATTGCAGTCTCAGGTGATTCATCTACAACAGAGTATTGGAAGCCTTGTCGAGGAACTAGAAAGAAACAAGTTGAAAAATGCACAGTTAGAAAGACGATTAAACGCTTTGATGAAAAAAGAGGAAGAAATACGAGAAAATGAAGCGTGA 2013 41.78 MESEKKFPLNAKDYKLYEEVGEGVSASVYRALCIPLNAIVAIKVLDLEKCNNDLDGIRREVQTMTLINHTNLLQAHCSFTAGHSLWVVMPYMAGGSCLHIMKSSYPEGFEEPVIATLLREVLKALVYLHAHGHIHRDVKAGNILINSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKHPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEMVSACLVKDPKKRPTSEKLLKHSFFKNGRSNEYLTRTILDDLAPLGDRFKMLKAKEADLLGQNKVLYGDKEHLSQQEYIRGISAWNFNLEDLKSQAALIQDDSIPVSEDPNVYKKQRDKNDEFGFHVEKQSLESLYHLNSIPSREDGSDDFSDLEGSLASLPIKPLKALKGCFDTCEDDVNINSPRAMDQENGKAQGECSGESSSLPRNAGDLKKNFSCSLLPDHANSPKKATADNERDYSKYLPDRNYSGQSIYRPKRDMCNPSSVEDASEGAVVQCKGRFKVTSADLSPKGTTAGSFNAVYRASVSPTNLSADSILPSLQFILQHNALQREEVIKLIKYLEQTSVKQAESGEGGSGDLLQIPPTSSRERELQSQVIHLQQSIGSLVEELERNKLKNAQLERRLNALMKKEEEIRENEA 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9363976 9371073 + Conep18aG0140700.1 Cone18ag1363 458324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1363 670 SMART serkin_6 14 275 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag1363 670 Gene3D Transferase(Phosphotransferase) domain 1 95 308 - -
Cone18ag1363 670 CDD STKc_OSR1_SPAK 12 275 - -
Cone18ag1363 670 MobiDBLite consensus disorder prediction 599 618 - -
Cone18ag1363 670 Coils Coil 634 668 - -
Cone18ag1363 670 FunFam Serine/threonine-protein kinase BLUS1 3 91 - -
Cone18ag1363 670 SUPERFAMILY Protein kinase-like (PK-like) 11 297 IPR011009 -
Cone18ag1363 670 ProSiteProfiles Protein kinase domain profile. 14 275 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag1363 670 MobiDBLite consensus disorder prediction 435 457 - -
Cone18ag1363 670 FunFam serine/threonine-protein kinase BLUS1 isoform X1 95 328 - -
Cone18ag1363 670 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 651 IPR047173 GO:0043539(InterPro)
Cone18ag1363 670 MobiDBLite consensus disorder prediction 433 457 - -
Cone18ag1363 670 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524(InterPro)
Cone18ag1363 670 Gene3D Phosphorylase Kinase; domain 1 3 90 - -
Cone18ag1363 670 Pfam Protein kinase domain 14 275 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0550 Cone-Chr12:3937856 Cone18ag1363 Cone-Chr18:9363976 2.79E-167 dispersed
Cone18ag1363 Cone-Chr18:9363976 Cone20ag1129 Cone-Chr20:7711788 1.19E-184 dispersed
Cone4ag0304 Cone-Chr4:1392541 Cone18ag1363 Cone-Chr18:9363976 2.20E-103 transposed
Cone11ag0114 Cone-Chr11:504731 Cone18ag1363 Cone-Chr18:9363976 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82354 PF13578 Methyltransf_24 8.10E-11 CL0063 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1363 K08835 - csv:101205102 967.607