Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1379 ATGGAGTCACTTGTTGATGGTGTGAGATCCTTAGCCAAAGCTCCTCCCACATCTGGGCTTTCTCCCTCCTCTAGACACCCTTCTCCGAAAGCACCTCGAGACCAATCAACTTCTTCATATTCTCAGTATATCGGCACAAAACAACCCCAATATTCAAATGGTTCCGCGATTCATCATCATCAAAAGAAGCCTTCTGACAGATGGCCTCATGATAATAAATCACAGCTCGAAGACTTGCATAAATCGATCAAGGGGAAATCAGTTGTACCTTCTTCACTAAAAAAGGATTGTAGTTCAAGTGGGTTGCAAGAATCTCAAGCTATGCAAATAAACAGCCAATTGACATCTCAGTTTATAGTGAATTCTTGCACAAGTCCTCAGAACAGTTTATACTCTGCAACTGTGTATTCAGAAGCAAAACAGAGCTTTACGAATACGGAGGTGAGTGAATGTACAAGCAGCATTGATAAGTCTCATGAAAGCAGTGATTTTGTTAACAAGAGTAGGAAAAACAGTGTTTACCGAGAAAGCACGGGTAGTGATTTGAGTGATGAGAGCAATTCAAGTAGTTTGAGCAGTACAACTTATAAGCCCCATAAGGCAAATGATACGAGATGGGAAGCGATTCAGATCGTCCGATCCAGAGAAGGGATGTTAGGAGTGAATCATTTCAGGTTATTGAGAAGACTTGGTTGTGGAGATATTGGGAGTGTTCATCTTGCTGAGTTGACTGGTACGAGAACTTTCTTTGCGATGAAGGTTATGGATAAAGCTGCTCTGGCTAGTAGGAAAAAGCTTTTAAGGGCTCAGACGGAAAGAGAGATATTGCAATGTTTGGATCATCCATTTTTGCCCACTTTGTACACTCATTTTGAAACGGAGAAGTTCGCTTTCTTGGTTATGGAGTTCTGCTCGGGTGGGGACTTGCATTCTCTAAGGCAAAGACAACCTGGAAAGTTTTTTCCAGAGCATGCTGCCAGGTTTTATGTGGCTGAAGTTCTTCTTGCTTTGGAATATCTACACATGCTTGGAATCATATATAGAGACCTGAAACCAGAGAATGTGTTAGTGAGAGAAGATGGTCACATAATGCTTTCCGATTTCGACCTCTCTTTAAGATGTGCAGTTTCACCAACTCTAGTCAGATCGTCAAACTCCTGTTTGGAGTCAAAGAGCTCAGCTTACTGTGTCCAACCCGCTTGCATCGAGCCGAGTTGTGTAATGCAGCCAGATTGCATCCAACCTTCATGTTTCACCCCTCGCTTCTTTTCAAACAAACCCAAGAAAGACAAAAAGGTTAGTACTACTAGTACTACTAGTAGTGGTAAACCAAAAAATGAGGTATATCATCAAGTGAGTCCTCTTCCCGAGCTCTTAGCGGAACCCACAAGTGCTCGGTCCATGTCATTTGTCGGGACCCATGAGTACTTGGCTCCAGAAATCATAAAAGGCGAAGGGCATGGCAGTGCTGTTGATTGGTGGACTTTTGGGGTCTTTCTATACGAGCTCTTGTTTGGAAAAACTCCGTTCAAAGGGAATGGAAACAGGGCTACTCTGTTTAACGTGGTGGGCCAGCCCTTGAGATTTCCGGAAAATCCTTCTGTTAGCTTTGCAGCAAGGGATTTGATCAGAGGCTTATTAGTGAAAGAGCCACAGCATCGTCTGGCCTATAGACGAGGAGCTACAGAGGTTAAACAGCATCCCTTTTTCCAGAGCATTAACTGGGCTCTGATCCGATGTGCTAATCCACCGGAGATACCGAAAGTAGAGGTGATGAACTTCCCTTCGAAAAGTGAGAACCCACAATCGCCAACGGCTGAGAACCCATCTGGAGTTGATGTCAAGCCTTCAGGTAATTATTTAGAGATCGACTTCTTTTAA 1881 43.49 MESLVDGVRSLAKAPPTSGLSPSSRHPSPKAPRDQSTSSYSQYIGTKQPQYSNGSAIHHHQKKPSDRWPHDNKSQLEDLHKSIKGKSVVPSSLKKDCSSSGLQESQAMQINSQLTSQFIVNSCTSPQNSLYSATVYSEAKQSFTNTEVSECTSSIDKSHESSDFVNKSRKNSVYRESTGSDLSDESNSSSLSSTTYKPHKANDTRWEAIQIVRSREGMLGVNHFRLLRRLGCGDIGSVHLAELTGTRTFFAMKVMDKAALASRKKLLRAQTEREILQCLDHPFLPTLYTHFETEKFAFLVMEFCSGGDLHSLRQRQPGKFFPEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVRSSNSCLESKSSAYCVQPACIEPSCVMQPDCIQPSCFTPRFFSNKPKKDKKVSTTSTTSSGKPKNEVYHQVSPLPELLAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGNGNRATLFNVVGQPLRFPENPSVSFAARDLIRGLLVKEPQHRLAYRRGATEVKQHPFFQSINWALIRCANPPEIPKVEVMNFPSKSENPQSPTAENPSGVDVKPSGNYLEIDFF 626
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9457845 9460692 + Conep18aG0142600.1 Cone18ag1379 458340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1379 626 PANTHER FLIPPASE KINASE 1-RELATED 100 594 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cone18ag1379 626 MobiDBLite consensus disorder prediction 595 612 - -
Cone18ag1379 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 345 357 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone18ag1379 626 CDD STKc_phototropin_like 223 589 - -
Cone18ag1379 626 Gene3D Phosphorylase Kinase; domain 1 222 307 - -
Cone18ag1379 626 MobiDBLite consensus disorder prediction 175 198 - -
Cone18ag1379 626 Gene3D Transferase(Phosphotransferase) domain 1 308 375 - -
Cone18ag1379 626 SUPERFAMILY Protein kinase-like (PK-like) 197 607 IPR011009 -
Cone18ag1379 626 MobiDBLite consensus disorder prediction 59 73 - -
Cone18ag1379 626 FunFam serine/threonine-protein kinase D6PK-like 308 375 - -
Cone18ag1379 626 Pfam Protein kinase domain 225 374 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag1379 626 Pfam Protein kinase domain 467 570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag1379 626 MobiDBLite consensus disorder prediction 1 73 - -
Cone18ag1379 626 FunFam Serine/threonine-protein kinase D6PK-like 222 307 - -
Cone18ag1379 626 Gene3D Transferase(Phosphotransferase) domain 1 465 588 - -
Cone18ag1379 626 ProSiteProfiles Protein kinase domain profile. 224 570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag1379 626 MobiDBLite consensus disorder prediction 594 618 - -
Cone18ag1379 626 MobiDBLite consensus disorder prediction 16 58 - -
Cone18ag1379 626 SMART serkin_6 224 570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone18ag1379 626 FunFam serine/threonine-protein kinase D6PK-like 465 588 - -
Cone18ag1379 626 MobiDBLite consensus disorder prediction 426 447 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone18ag1379 Cone-Chr18:9457845 Cone5ag1793 Cone-Chr5:12725115 1.88E-225 dispersed
Cone11ag0097 Cone-Chr11:411823 Cone18ag1379 Cone-Chr18:9457845 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82356 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1379 K08286 - csv:101219962 872.463