Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone18ag1427 | ATGATGGGAATGTTCTTCTACTCTCTCTTACAACTTCACCCTCTACAATTTCTCTTCCTATCAATATTTCTGATCTACTTTTTGCATGTTTGCTTCTACAAATACCTGATCAAAACAATCAACTTTTCATCCAAAACTCCATTAACCAATTACCCTCTCATTGGTTGCTTGCTTTCCTTCTATAAAAACAGGCACCGCCTTCTGGATTGGTACACACAACTCCTTGCAGAATCATCAACAAAAACTATCGTTGTTCAGAGACTTGGATCGAGAAGAACTGTCGTTACTGCAAACCCAGAGAACATTGAATATATTCTCTCAACCCGTTTCAACAATTTTCCAAAAGGCAAGCCATTTACAGAAATTCTTGGCGATTTTCTTGGCTATGGTATTTTCAATGTAGACGGCGAGCTTTGGCGAACTCAGAGAAAGCTAGCAAGCCATGAGTTTAGTGCAAGATCTCTGAAAGATTTTGTTGTGAGAACTTTAGAAGAAGAAGTGGAGAATCACTTGCTGCCATTAATGGAGTCTTTAGCTGAGAAAAAAACAGTTCTAGACTTGCAAGAGTTGCTTAGAAGACTTGGGTTCAATGTGATCTGTAAGATATCTTTAGGGACTGATAGATATTGCTTAGATCCTTCACAACCCATTTCACCACTTGCAAAAGGGTTTGATGTGGCTTCAGAAATAAGTGCAAAAAGAGCAACAGAGCCATTGTTTTTAGTCTGGAAGATTAAAAAATGGCTAAAAGTTGGATCTGAAAGGAAACTGAGAGAAGCTATTAAAGATGTTCATCGTTATGTAATGGAGATCATTCATAACAGAAAAAGAAACATGGTCAGCGAAGAAGAAGATCAAGATCTCTTATCTAGATTAATATTAGCAGGTCATGAAGATGAAGTTATTAGAGATATGGTGATAAATTTTATAATGGCAGGAAGAGACACAACTTCAGCAGCAATGACATGGTTTTTCTGGCTGATTTCTCGTCACCCAGATGAAGAAAAAGAGGTGGTGAAAGAGATTGAAGATTCTCTCAACCATGAAAGAGCCTTGGAATTTGAAACATTTAAAGAATTAAAAATGTTAGAAGCTTGTCTTTGTGAAACAATGAGAGTTTACCCACCCGTTGCTTGGGATTCAAAGCATGCAATTTCTTCTGACTTTTTGCCAGATGGGACCCAGATTCTAGCAGGTGATAGAGTCACTTATTTTCCTTATGGAATGGGAAGAATGGAGGCTTTATGGGGTAAAGATAGGTATGAGTTTAAACCCAAAAGATGGTTTTTGGATGAGAAGAGGGAATTGAAGAAAGTTTGTGCTTACAAATTTCCAATTTTTCAGGCAGGTCCAAGAGTTTGTCTAGGGAAAGATATGGCTTTTATTCATATGAAATATGTGGTGGCTTCAATTCTAAGGAGGTTCGAGATCAGGCCGGTAGGAGCAGCTCAGCCAGTTTTCGTGCCTCTCTTGACGGCCCATATGGCCGGAGGGTTAAAGGTTTTGATCCGAGGGAGAACGACAAGTCCATAA | 1533 | 38.75 | MMGMFFYSLLQLHPLQFLFLSIFLIYFLHVCFYKYLIKTINFSSKTPLTNYPLIGCLLSFYKNRHRLLDWYTQLLAESSTKTIVVQRLGSRRTVVTANPENIEYILSTRFNNFPKGKPFTEILGDFLGYGIFNVDGELWRTQRKLASHEFSARSLKDFVVRTLEEEVENHLLPLMESLAEKKTVLDLQELLRRLGFNVICKISLGTDRYCLDPSQPISPLAKGFDVASEISAKRATEPLFLVWKIKKWLKVGSERKLREAIKDVHRYVMEIIHNRKRNMVSEEEDQDLLSRLILAGHEDEVIRDMVINFIMAGRDTTSAAMTWFFWLISRHPDEEKEVVKEIEDSLNHERALEFETFKELKMLEACLCETMRVYPPVAWDSKHAISSDFLPDGTQILAGDRVTYFPYGMGRMEALWGKDRYEFKPKRWFLDEKRELKKVCAYKFPIFQAGPRVCLGKDMAFIHMKYVVASILRRFEIRPVGAAQPVFVPLLTAHMAGGLKVLIRGRTTSP | 510 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 9653458 | 9654990 | - | Conep18aG0147400.1 | Cone18ag1427 | 458388 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone18ag1427 | 510 | SUPERFAMILY | Cytochrome P450 | 51 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag1427 | 510 | FunFam | Cytochrome P450 | 38 | 509 | - | - | |
| Cone18ag1427 | 510 | Pfam | Cytochrome P450 | 47 | 480 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag1427 | 510 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag1427 | 510 | PRINTS | E-class P450 group I signature | 454 | 477 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag1427 | 510 | PRINTS | E-class P450 group I signature | 444 | 454 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag1427 | 510 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag1427 | 510 | Gene3D | Cytochrome P450 | 45 | 506 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag1427 | 510 | CDD | CYP86A | 81 | 499 | - | - | |
| Cone18ag1427 | 510 | PRINTS | P450 superfamily signature | 454 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag1427 | 510 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag1427 | 510 | PRINTS | P450 superfamily signature | 445 | 454 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag1427 | 510 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone18ag1427 | 510 | PANTHER | CYTOCHROME P450 | 31 | 499 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone16ag0020 | Cone-Chr16:148165 | Cone18ag1427 | Cone-Chr18:9653458 | 1.15E-207 | dispersed | |
| Cone18ag1427 | Cone-Chr18:9653458 | Cone2ag0970 | Cone-Chr2:35224812 | 1.04E-203 | dispersed | |
| Cone11ag0055 | Cone-Chr11:242010 | Cone18ag1427 | Cone-Chr18:9653458 | 1.72E-85 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone18ag1427 | K20665 | - | mdm:103404195 | 678.707 |