Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1441 ATGGATCCCAAGAACTCACCAACAAATTTCTTAAACTTCCCACATCATCAGTATCATCATCATCGTCGTCAAGAACAATCAAACATGGGTGAAGATGAAACAAACAACAAGAAACCATCAGAAATCAAAGATTTTCAGATTGCAGTTGCAGAAAAAGAAGGGAGCAGCAAAAACAAGCAGTTGGCACCAAAAAGAAGCTCAAACAAGGACAGACACACAAAAGTTGAAGGCAGGGGAAGAAGAATAAGAATGCCAGCTTTGTGTGCAGCCAGAGTTTTCCAACTAACCAGAGAACTTGGTCACAAATCCGACGGTGAAACCATACAGTGGCTTCTACAGCAATCTGAGCCATCCATAATTGCCGCCACAGGCAGCGGCACGATCCCCGCCTCCGCCTTATCTGTCACTGGAGCAGGGGTCTTTGTTTCGCAGCAGGGGAACTCAGTTTCCACCGGATTGCTAATGCCCAATAAGATTGATGAATTTGGTAGGCCAGGTAGTAGCAGCAGTAGTAGTAGTAGGGCCAGTTGGGCTGCTATGGTTAATAATATTAATGGAGGTAATAGTCTATGGCCCTCTGTTCTAACTGGTTTTGGTGCTTCGTCGTCATCAGCCACTAATCTAGGTGGTGTAGATGGTTCCAATTATTTGCACAAAATTGGTGTTTCAGGGTTTGGTTTTCCACAAGCTAATAATTTGGGTCCTCTGAATTTTACTTCTATTATGGGTGGGAATAACAATAATCATAATAACAGTAGTAATCAGCAGCAATTTCCTGGATTGGAGCTTGGTTTATCACAGGATGCTCATAGTGGGCCAATTGGGGTTCTGAATCCACAAGCTCTTGCCCAGATTTATCAGCAAATGGGTCAGCCTAGATTTCACCACCACCACCACGATCAACCGCCACTTCATAACCACCCGAACCATCAGCAACCGCCTGCTAAGGATGATTCTGGAGGGTCCGGCCAGTAG 975 44.92 MDPKNSPTNFLNFPHHQYHHHRRQEQSNMGEDETNNKKPSEIKDFQIAVAEKEGSSKNKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDGETIQWLLQQSEPSIIAATGSGTIPASALSVTGAGVFVSQQGNSVSTGLLMPNKIDEFGRPGSSSSSSSRASWAAMVNNINGGNSLWPSVLTGFGASSSSATNLGGVDGSNYLHKIGVSGFGFPQANNLGPLNFTSIMGGNNNNHNNSSNQQQFPGLELGLSQDAHSGPIGVLNPQALAQIYQQMGQPRFHHHHHDQPPLHNHPNHQQPPAKDDSGGSGQ 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9703268 9705220 + Conep18aG0148800.1 Cone18ag1441 458402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1441 324 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 31 294 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Cone18ag1441 324 Pfam TCP family transcription factor 67 136 IPR017887 -
Cone18ag1441 324 MobiDBLite consensus disorder prediction 1 80 - -
Cone18ag1441 324 MobiDBLite consensus disorder prediction 57 80 - -
Cone18ag1441 324 MobiDBLite consensus disorder prediction 291 324 - -
Cone18ag1441 324 MobiDBLite consensus disorder prediction 23 50 - -
Cone18ag1441 324 ProSiteProfiles TCP domain profile. 68 122 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0235 Cone-Chr10:1152252 Cone18ag1441 Cone-Chr18:9703268 1.61E-31 dispersed
Cone14ag0318 Cone-Chr14:1501325 Cone18ag1441 Cone-Chr18:9703268 3.98E-33 dispersed
Cone18ag1441 Cone-Chr18:9703268 Cone19ag0075 Cone-Chr19:459768 1.79E-32 dispersed
Cone11ag0038 Cone-Chr11:200499 Cone18ag1441 Cone-Chr18:9703268 4.24E-148 wgd
Cone16ag1006 Cone-Chr16:9820009 Cone18ag1441 Cone-Chr18:9703268 1.07E-84 wgd
Cone18ag1441 Cone-Chr18:9703268 Cone2ag0034 Cone-Chr2:186883 1.22E-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45252 None None None None Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1441 - - - 0.0