Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1458 ATGGCGACCAGATACTGGATAGTGTCTCTTCCGGTGCAAGGTTCTGCATCATCTTTGTGGAATTCTCTTCAAGAGAGAATCTCCAAGCATTCCTTCGATACTCCTCTCTACAGATTTAATATACCTAATCTCCGCGTGGGAACCCTCGATTCCCTTCTTTCACTCAGTGACGATCTTCTGAAGTCGAACAGCTTCGTGGAGGGAGTCTCTCACAAGATCAGACGACAGATTGAGGAGTTGGAGCGGGCTTCAGGTGTAGTTAGCAGTGGGTTAACTGTGGATGGAGTGCCTGTTGATTCGTACCTAACAAGGTTCGTTTGGGATGAAGCCAAGTACCCGACAATGTCACCCTTGCGGGAAATTGTGGACAACAGTCATGGTCTTGTGGCAAAGATCGAAGACTATCTGAAGGTTCGTGTTGCTGAGTACAACAATGTAAGAAGTCGGCTAAATGCTATCAACAGAAAGCAAAGTGGAAGCTTAGCAGTTCGTGATCTTTCCAACATCGTGAAACCAGAAGATATAATTACTTCAGAGCATCTTTTAACCCTTCTTGCAGTTGTTCCCAAGTACTCTCAGAAGGATTGGCTGTCTAGCTATGAAACGTTGACTAGCTATGTGGTGCCAAGGTCTTCCAAGAAGTTGCATGAGGATAATGAGTATGCTCTATATACCGTAACCTTATTTGGGCGTGTTGCAGACAATTTTAGAACAAGTGCTCGTGAAAGAGGGTTTCAGATCCGTGATTTCGAATATAGTTCAGATGCACAAGAGGGTAGGAAGCAGGAGTTGGAAAAATTGGTTCAGGATCAAGGAAATTTGAGAAGCTCTCTTTTGCAATGGTGCTACACTAGTTATGGCGAGGTCTTCAGCTCCTGGATGCACTTTTGTGCTGTACGTATTTTTGCTGAGAGCATACTGAGATATGGTTTACCACCGTCTTTTTTGGCAGCTGTTTTAGCCCCATCATTGAAAAGTGAGAAGAAGGTGAGATCAATCCTTGAAGGCTTGTGCGACACAGCGAACAGCACATACTGGAAAACAGAAGATGAAGCAGGAGGAGGGATGGTTGGTTTAGCAGGGGATTCAGATGCCCATCCATATGTTTCTTTCACAATCAACCTTATTTAA 1131 44.39 MATRYWIVSLPVQGSASSLWNSLQERISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLLKSNSFVEGVSHKIRRQIEELERASGVVSSGLTVDGVPVDSYLTRFVWDEAKYPTMSPLREIVDNSHGLVAKIEDYLKVRVAEYNNVRSRLNAINRKQSGSLAVRDLSNIVKPEDIITSEHLLTLLAVVPKYSQKDWLSSYETLTSYVVPRSSKKLHEDNEYALYTVTLFGRVADNFRTSARERGFQIRDFEYSSDAQEGRKQELEKLVQDQGNLRSSLLQWCYTSYGEVFSSWMHFCAVRIFAESILRYGLPPSFLAAVLAPSLKSEKKVRSILEGLCDTANSTYWKTEDEAGGGMVGLAGDSDAHPYVSFTINLI 376
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
18 9769268 9772774 + Conep18aG0150500.1 Cone18ag1458 458419
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1458 376 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 1 375 IPR004907 GO:0000221(PANTHER)|GO:0033180(InterPro)|GO:0046961(InterPro)|GO:0046961(PANTHER)|GO:1902600(InterPro)
Cone18ag1458 376 Gene3D Vacuolar atp synthase subunit c; domain 1 6 334 - -
Cone18ag1458 376 Pfam V-ATPase subunit C 5 369 IPR004907 GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cone18ag1458 376 Gene3D - 163 251 - -
Cone18ag1458 376 SUPERFAMILY Vacuolar ATP synthase subunit C 1 375 IPR036132 GO:0015078(InterPro)|GO:0033180(InterPro)|GO:1902600(InterPro)
Cone18ag1458 376 Gene3D - 41 312 - -
Cone18ag1458 376 CDD V-ATPase_C 5 373 IPR004907 GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cone18ag1458 376 FunFam V-type proton ATPase subunit C 163 251 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0022 Cone-Chr11:131505 Cone18ag1458 Cone-Chr18:9769268 8.49E-262 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1458 K02148 - mdm:103404142 657.907