Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone18ag1459 ATGGCTCTCCCTGATAACAGACCTCGTCAATCTCTCATCCCTAACTTCCTTTATTCCTCTTCTTTCTCCACCAAAACCCCAGCCCTTGACAAAATGGTCCAGCCCTCCCCTGCCGGCTTTGAATCTGTTTCGCCAGCCACCAAGAGCTTCGTCATTCCTGCCCCCACCGACCCTGGCAAGAAGATTGAGATGTACTCCCCCGCCTTCTACGGCGCCTGTACCGTTGGTGGAATTCTCAGCTGTGGTCTCACTCACACGGCCGTCACCCCTCCCGATGTTGTCAAATGCAATATGCAGATCGACCCTGCAAAATACAAAAGCATTTCATCTGGTTTTGGAGTCTTGCTCAAGGAACAGGGTGTCAAAGGTTTATTCAGGGGTTGGGCCCCTACACTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTATGGATTTTACGAATTCTTCAAAAAGTATTACTCTGATATTGCCGGACCAGAGTATGCAACCAAGTACAAGACCTTGATCTATCTTGCTGGTTCTGCATCTGCTGAGGTGATTGCGGATGTTGCACTTTGCCCCTTTGAAGCCGTGAAAGTCCGTATTCAAACACAACCTGGTTTTGCCAGAGGTCTTTCAGATGGCCTTCCCAAGTTTGTCAGATCTGAGGGAGTTCTTGGGTTGTACAAGGGTCTTGTTCCTCTATGGGGACGTCAGATTCCATATACTATGATGAAATTTGCATCCTTTGAGACGATTGTTGAATTGCTCTATAAGCATGCCACTCCGAAACCAAAGGATCAGTGTAGCAAAGGGCTGCAGCTTGGCGTGAGTTTTGCTGGTGGGTATGTGGCTGGTGTTTTCTGTGCTATTGTGTCTCATCCTGCAGACAATCTTGTCTCTTTTCTGAACAATGCCAAGGGGGCGACTGTTGGCGATGCCGTGAAAAAGATTGGATTAGTGGGTTTGTTTACCCGTGGGCTGCCCCTCCGTATTGCCATCATTGGAACACTTACCGGAGCACAATGGGTAATCTATGATGCATTCAAGGTCTTCGTGGGATTGCCAACCACGGGAGGTGCTGCCCCTGCTACAGCAACTGCAGACTTGGCAAAGGCCTAA 1101 49.32 MALPDNRPRQSLIPNFLYSSSFSTKTPALDKMVQPSPAGFESVSPATKSFVIPAPTDPGKKIEMYSPAFYGACTVGGILSCGLTHTAVTPPDVVKCNMQIDPAKYKSISSGFGVLLKEQGVKGLFRGWAPTLLGYSAQGACKYGFYEFFKKYYSDIAGPEYATKYKTLIYLAGSASAEVIADVALCPFEAVKVRIQTQPGFARGLSDGLPKFVRSEGVLGLYKGLVPLWGRQIPYTMMKFASFETIVELLYKHATPKPKDQCSKGLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKIGLVGLFTRGLPLRIAIIGTLTGAQWVIYDAFKVFVGLPTTGGAAPATATADLAKA 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9772843 9776180 - Conep18aG0150600.1 Cone18ag1459 458420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone18ag1459 366 Pfam Mitochondrial carrier protein 71 155 IPR018108 -
Cone18ag1459 366 Pfam Mitochondrial carrier protein 166 253 IPR018108 -
Cone18ag1459 366 SUPERFAMILY Mitochondrial carrier 73 341 IPR023395 -
Cone18ag1459 366 Gene3D Mitochondrial carrier domain 71 359 IPR023395 -
Cone18ag1459 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 266 345 IPR018108 -
Cone18ag1459 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 165 249 IPR018108 -
Cone18ag1459 366 ProSiteProfiles Solute carrier (Solcar) repeat profile. 68 152 IPR018108 -
Cone18ag1459 366 FunFam Phosphate carrier protein, mitochondrial 68 346 - -
Cone18ag1459 366 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 55 354 IPR044677 GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1210 Cone-Chr10:8978939 Cone18ag1459 Cone-Chr18:9772843 8.03E-113 dispersed
Cone18ag1459 Cone-Chr18:9772843 Cone19ag1356 Cone-Chr19:9005778 3.61E-11 dispersed
Cone11ag0021 Cone-Chr11:128661 Cone18ag1459 Cone-Chr18:9772843 6.46E-243 wgd
Cone18ag1459 Cone-Chr18:9772843 Cone19ag0236 Cone-Chr19:1548657 8.72E-193 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone18ag1459 K15102 - csv:101221771 592.038