Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0005 ATGCCTGTGTCAACTCGGTCTCAAACCACCAACCACGGGCCGAATGATTCAATCTCAGAACAGAGAGCCAAATCCAGATCAGATCGAGAAGACAACAATTACACAAACCTTCAAATGAGGAACCCACATAATGGATTGAAGGAGAAAATGAAAGCCTTAACTCTCTTGTACGAACAACACAAACAAGCCTCGGCAGCTGCTCTCAAGAACCCGTCTCTAAAACACGAAGAGCCAGGGTTTAAGACTCACCCGAGTGTGGAGATTTTGGGTACTTGCATAAAAGAAGAACAACCTGCAGAGCCTGGCAATGTAATGAGAGAGAACACAATACCCAATTCCATGGTTACAAGAACTTACGTTTTGCCTCAACCACCTATCCCCGACACCAAGGAAAATGTGAATGTGGGAAATGAGAGGATTGTGGGGTTTTCGTGTCCAAGAAAGGCCAATGTCTCCACTGTGGTGGCGAGAAAGCTGTCAATGGGAGCTGCAGTGAAACAGAATGTCCAACAAGAAGAGGAAATTGGGAGTGTTTTGAGGGAGAAGCCCGTTTTGAGGGAGAGGAGTAGGATCCTTGTGTTTGTGAGGGTGAGGCCAATGGCTAAGAAAGAGAAGGAAGTGGGATCGAGGTGTTGTGTTAGGACAGCAAATGGGAGAGATGTTTATTTGACAGAGTTTGCAAACGAGAACGATTATTTGAGGCTAAACAGGCTTCGTGGAAGGCATTTTACATTTGACGGCTCCTTTCCTGATACGGCTACCCAGCAGCAGGTTTATTCCACTACAACTGCAGATCTCGTGGAGGCAGTTCTGCAGGGAAGGAATGGTACAGTCTTCTGCTATGGCGCCACAGGAGCTGGAAAGACTTTCACAATGCTCGGTACTTCAGAAAATCCAGGAGTAATGGTTTTGGCCATTAAGGACCTCTTCTCTAAGATCAGGCAAAGGAGCTATGATGGAAATCATACTGTTCATCTGTCCTATCTGGAGGTATATAATGAAACTGTTAGGGATTTGTTGTCGCCCGGAAGGCCTCTGGTCCTTAGAGAAGATAAACAGGGGATTGTGGCAGCTGGTCTTACACAGTACAGAGCTTTTTCGAATGATGAAGTGATGGCATTGCTTCAACAAGGAAATCGAAACCGAACCACTGAACCAACCCGTGCGAATGAAACTTCTTCACGGTCCCACGCCATACTGCAGGTTCGGGTAGAATATCGTGTAAGGGATGCCGAAATGAATGTTGTTAACCGAGTGGGAAAACTGTCATTGATTGATCTTGCCGGTTCAGAGAGAGCTCTTGCTACGGATCAGAGAACAATAAGATCTCTAGAGGGTGCAAACATAAACCGGTCACTTCTTGCACTAAGCAGCTGCATCAATGCCCTCGTCGAAGGCAAGAAACACATTCCATATCGGAATTCGAAACTTACTCAACTTCTCAAGGACTCGTTAGGAGGAGCTTGCAACACTGTCATGATTGCAAATATTAGCCCAAGCAATCTCTCCTTCGGTGAAACCCAAAACACCCTCCATTGGGCCGATCGAGCCAAGGAGATCCGAACTAAGACGAGCGAGTCATGTGCGGAAGTAGAGCAAGTAAACGAGTTGGAGTCTGATCAAGCCAAACTATTACTAGAATTGGAGAAAGAGAATCGAGAATTACGAGTTCAGCTGGCACGTCACCAACAGAAATTAATGACCCTGCAGGCACAATTCTTAGCTGCAGCAAATAATGCCTCTCCAACCCCTTCTTCTGTCACCTCACTGTTAACTCCTCCATCTTCGGCCCAGGCAAACGAAAAACGGAAGCCAAGATCATCTTTCTTAGGCACAAACTGTTTCACACCAGAATTTAGGAAGAAGGGAGCTGATGACAGAGTCAGAGAGCTTCGTATGATGGTTAAAGCATTGGATACAGAACTTGAGAGAGTAAAGAAAGATCACACGTTGCAGTTGAAGAAGAAAGACGATCTTATCAGCCAGCTATCCAGGGCAAGCGAAAAGCCAGCAGTAGTAGGAGGAGGAGGAGTAAAGAGGGTGATAGCCACAAGGGCTAGACTACAGGCAAAGGAGCCGAGCACTGGAGACTTGAAAAGTGCAAGCCACCGGTTTCGATCACCGGCTCCTACAGCTAAGAAACGAAGCTTTTGGGACATAGCAGCGGCCAGTAGTCCATCTTACGCTACCCGAAATGCAAGGAAAACTAGAAGTCATGTTCATGTCACTGCTGAACCTGCAACATCTATGCTTCTTCAGCCAGGTTTTTCTCGCCAGAAGCCATAG 2286 46.54 MPVSTRSQTTNHGPNDSISEQRAKSRSDREDNNYTNLQMRNPHNGLKEKMKALTLLYEQHKQASAAALKNPSLKHEEPGFKTHPSVEILGTCIKEEQPAEPGNVMRENTIPNSMVTRTYVLPQPPIPDTKENVNVGNERIVGFSCPRKANVSTVVARKLSMGAAVKQNVQQEEEIGSVLREKPVLRERSRILVFVRVRPMAKKEKEVGSRCCVRTANGRDVYLTEFANENDYLRLNRLRGRHFTFDGSFPDTATQQQVYSTTTADLVEAVLQGRNGTVFCYGATGAGKTFTMLGTSENPGVMVLAIKDLFSKIRQRSYDGNHTVHLSYLEVYNETVRDLLSPGRPLVLREDKQGIVAAGLTQYRAFSNDEVMALLQQGNRNRTTEPTRANETSSRSHAILQVRVEYRVRDAEMNVVNRVGKLSLIDLAGSERALATDQRTIRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGACNTVMIANISPSNLSFGETQNTLHWADRAKEIRTKTSESCAEVEQVNELESDQAKLLLELEKENRELRVQLARHQQKLMTLQAQFLAAANNASPTPSSVTSLLTPPSSAQANEKRKPRSSFLGTNCFTPEFRKKGADDRVRELRMMVKALDTELERVKKDHTLQLKKKDDLISQLSRASEKPAVVGGGGVKRVIATRARLQAKEPSTGDLKSASHRFRSPAPTAKKRSFWDIAAASSPSYATRNARKTRSHVHVTAEPATSMLLQPGFSRQKP 761
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 53712 57392 + Conep19aG0000500.1 Cone19ag0005 458442

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0005 761 ProSiteProfiles Kinesin motor domain profile. 190 520 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone19ag0005 761 PANTHER CENTROMERE PROTEIN E 189 663 IPR027640 GO:0003777(InterPro)|GO:0007018(InterPro)
Cone19ag0005 761 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 564 IPR027417 -
Cone19ag0005 761 MobiDBLite consensus disorder prediction 729 761 - -
Cone19ag0005 761 SMART kinesin_4 188 528 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone19ag0005 761 MobiDBLite consensus disorder prediction 19 33 - -
Cone19ag0005 761 Coils Coil 534 572 - -
Cone19ag0005 761 Coils Coil 628 648 - -
Cone19ag0005 761 MobiDBLite consensus disorder prediction 690 709 - -
Cone19ag0005 761 MobiDBLite consensus disorder prediction 580 609 - -
Cone19ag0005 761 Coils Coil 43 63 - -
Cone19ag0005 761 Gene3D Kinesin motor domain 184 526 IPR036961 -
Cone19ag0005 761 FunFam Kinesin-like protein 185 525 - -
Cone19ag0005 761 PRINTS Kinesin heavy chain signature 273 294 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone19ag0005 761 PRINTS Kinesin heavy chain signature 421 439 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone19ag0005 761 PRINTS Kinesin heavy chain signature 470 491 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone19ag0005 761 PRINTS Kinesin heavy chain signature 387 404 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone19ag0005 761 Pfam Kinesin motor domain 196 520 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cone19ag0005 761 ProSitePatterns Kinesin motor domain signature. 420 431 IPR019821 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)
Cone19ag0005 761 MobiDBLite consensus disorder prediction 1 45 - -
Cone19ag0005 761 MobiDBLite consensus disorder prediction 1 18 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0005 K26157 - - csv:101222937 1046.57
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0005 Cone-Chr19:53712 Cone9ag1423 Cone-Chr9:10566317 1.09E-76 dispersed
Cone1ag1166 Cone-Chr1:55753201 Cone19ag0005 Cone-Chr19:53712 2.82E-25 dispersed
Cone13ag0004 Cone-Chr13:22182 Cone19ag0005 Cone-Chr19:53712 2.12E-145 transposed
Cone13ag0005 Cone-Chr13:23346 Cone19ag0005 Cone-Chr19:53712 2.44E-14 transposed
Cone13ag0006 Cone-Chr13:23641 Cone19ag0005 Cone-Chr19:53712 3.58E-111 transposed
Cone13ag0003 Cone-Chr13:21624 Cone19ag0005 Cone-Chr19:53712 1.35E-39 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g379 . . Bda06g00496 . . . . Bma12g00945 . . Cma10g00258 . Car10g00243 . . . . Bhi02g00015 . . . . . . Cla06g01495 Cam06g1649 Cec06g1709 Cco06g1707 Clacu06g1615 Cmu06g1564 Cre06g2376 . . Cone13ag0006 Cone19ag0005 . . . . . Blo15g00357 . . Bpe07g00737 . . Bma08g00253 . Cmo10g00275 . . . . . . Cpe18g00737 . . . . . . . . . . . . . . Lsi06g01359 Csa01g00353 Chy02g02390 Cme02g01775
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007142 1 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 0 1 1 34