Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0007 ATGGAACCGATGGACATAGTCGGGAAGTCTAAAGAGGACGCTTCGCTTCCGAAAGCAACTATGACTAAAATTATTAAGGAGATGTTACCACCTGATGTACGTGTTGCAAGAGATGCTCAAGACCTTTTGATCGAATGTTGCGTAGAGTTTATAAACTTAGTCTCATCAGAGTCTAATGATGTTTGTAACAGAGAAGACAAAAGAACAATTGCACCTGAGCATGTGCTCAAGGCCTTACAGGTGCTCGGGTTTAGCGGCTATATTGAGGAAGTTTATCATGCATATGAACAGCACAAGCTTGAAACTATGCAGGACTCATTGAGAGGGGCAAAGTGGAGCGGAGGAGCTGAGATGACTGAGGAGGAAGCCTTGGCCGAGCAACAGAGAATGTTTGCGGAGGCGCGCGCGAGAATGAACGGTGAGGGTACAACTGCTCCGAAGCAGGCAGAGCCTGACCAAAATTTACAAAGCTGA 474 46.41 MEPMDIVGKSKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNREDKRTIAPEHVLKALQVLGFSGYIEEVYHAYEQHKLETMQDSLRGAKWSGGAEMTEEEALAEQQRMFAEARARMNGEGTTAPKQAEPDQNLQS 157
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 60280 62675 - Conep19aG0000700.1 Cone19ag0007 458444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0007 157 FunFam Negative cofactor 2 beta 6 143 - -
Cone19ag0007 157 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 14 79 IPR003958 -
Cone19ag0007 157 Gene3D Histone, subunit A 4 145 IPR009072 GO:0046982(InterPro)
Cone19ag0007 157 SUPERFAMILY Histone-fold 12 141 IPR009072 GO:0046982(InterPro)
Cone19ag0007 157 PANTHER PROTEIN DR1 HOMOLOG 1 155 IPR044255 -
Cone19ag0007 157 MobiDBLite consensus disorder prediction 136 157 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0008 Cone-Chr13:27839 Cone19ag0007 Cone-Chr19:60280 2.39E-101 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45255 PF04759 DUF617 3.50E-66 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0007 K21751 - csv:101214627 274.248